Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_E02
(609 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT011358-1|AAR96150.1| 169|Drosophila melanogaster RE70427p pro... 245 3e-65
AE014296-2782|AAN11738.1| 169|Drosophila melanogaster CG3948-PB... 245 3e-65
AE014296-2780|AAF49428.2| 174|Drosophila melanogaster CG3948-PA... 245 4e-65
AB037672-1|BAA90485.1| 174|Drosophila melanogaster nonclathrin ... 245 4e-65
AE014296-2781|AAN11737.1| 163|Drosophila melanogaster CG3948-PC... 237 6e-63
AF145648-1|AAD38623.1| 448|Drosophila melanogaster BcDNA.GH0838... 32 0.70
AE014296-3346|AAN12125.2| 448|Drosophila melanogaster CG5498-PB... 32 0.70
AY071026-1|AAL48648.1| 191|Drosophila melanogaster RE10615p pro... 30 2.1
AF228056-1|AAG43053.1| 191|Drosophila melanogaster adaptor prot... 30 2.1
AE013599-3755|AAF47120.2| 191|Drosophila melanogaster CG3029-PA... 30 2.1
AY061172-1|AAL28720.1| 157|Drosophila melanogaster LD14109p pro... 28 8.7
AF228054-1|AAG43051.1| 164|Drosophila melanogaster clathrin-ass... 28 8.7
AE014297-3422|AAF56212.2| 157|Drosophila melanogaster CG5864-PA... 28 8.7
>BT011358-1|AAR96150.1| 169|Drosophila melanogaster RE70427p
protein.
Length = 169
Score = 245 bits (600), Expect = 3e-65
Identities = 109/158 (68%), Positives = 136/158 (86%)
Frame = +2
Query: 131 IVKGMCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEIIMLDGLTCVYK 310
I+KGMCI+D +GNRILAKYYDK++L T KEQKAFEKNLFNKTHR+N EIIMLDGLTCVYK
Sbjct: 8 IIKGMCIMDNDGNRILAKYYDKNILSTLKEQKAFEKNLFNKTHRSNTEIIMLDGLTCVYK 67
Query: 311 SNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDEICD 490
SNVDLFFYVMG+++ENELIL SVLN LY+S+SL+L++N+E+R+++ENL+ +MLAFDEICD
Sbjct: 68 SNVDLFFYVMGNAYENELILLSVLNCLYDSISLILKKNVEKRLVLENLEIIMLAFDEICD 127
Query: 491 GGVILDADPTSIVSRAALRTEDVPLGRANSGPXTEHHN 604
GG+ILDADP+S+V R LR +D+P+ T N
Sbjct: 128 GGIILDADPSSVVKRVDLRNDDIPIAEQTVAQVTNTLN 165
>AE014296-2782|AAN11738.1| 169|Drosophila melanogaster CG3948-PB,
isoform B protein.
Length = 169
Score = 245 bits (600), Expect = 3e-65
Identities = 109/158 (68%), Positives = 136/158 (86%)
Frame = +2
Query: 131 IVKGMCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEIIMLDGLTCVYK 310
I+KGMCI+D +GNRILAKYYDK++L T KEQKAFEKNLFNKTHR+N EIIMLDGLTCVYK
Sbjct: 8 IIKGMCIMDNDGNRILAKYYDKNILSTLKEQKAFEKNLFNKTHRSNTEIIMLDGLTCVYK 67
Query: 311 SNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDEICD 490
SNVDLFFYVMG+++ENELIL SVLN LY+S+SL+L++N+E+R+++ENL+ +MLAFDEICD
Sbjct: 68 SNVDLFFYVMGNAYENELILLSVLNCLYDSISLILKKNVEKRLVLENLEIIMLAFDEICD 127
Query: 491 GGVILDADPTSIVSRAALRTEDVPLGRANSGPXTEHHN 604
GG+ILDADP+S+V R LR +D+P+ T N
Sbjct: 128 GGIILDADPSSVVKRVDLRNDDIPIAEQTVAQVTNTLN 165
>AE014296-2780|AAF49428.2| 174|Drosophila melanogaster CG3948-PA,
isoform A protein.
Length = 174
Score = 245 bits (599), Expect = 4e-65
Identities = 107/145 (73%), Positives = 134/145 (92%)
Frame = +2
Query: 131 IVKGMCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEIIMLDGLTCVYK 310
I+KGMCI+D +GNRILAKYYDK++L T KEQKAFEKNLFNKTHR+N EIIMLDGLTCVYK
Sbjct: 8 IIKGMCIMDNDGNRILAKYYDKNILSTLKEQKAFEKNLFNKTHRSNTEIIMLDGLTCVYK 67
Query: 311 SNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDEICD 490
SNVDLFFYVMG+++ENELIL SVLN LY+S+SL+L++N+E+R+++ENL+ +MLAFDEICD
Sbjct: 68 SNVDLFFYVMGNAYENELILLSVLNCLYDSISLILKKNVEKRLVLENLEIIMLAFDEICD 127
Query: 491 GGVILDADPTSIVSRAALRTEDVPL 565
GG+ILDADP+S+V R LR +D+P+
Sbjct: 128 GGIILDADPSSVVKRVDLRNDDIPI 152
>AB037672-1|BAA90485.1| 174|Drosophila melanogaster nonclathrin
coat protein zeta-COP protein.
Length = 174
Score = 245 bits (599), Expect = 4e-65
Identities = 107/145 (73%), Positives = 134/145 (92%)
Frame = +2
Query: 131 IVKGMCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEIIMLDGLTCVYK 310
I+KGMCI+D +GNRILAKYYDK++L T KEQKAFEKNLFNKTHR+N EIIMLDGLTCVYK
Sbjct: 8 IIKGMCIMDNDGNRILAKYYDKNILSTLKEQKAFEKNLFNKTHRSNTEIIMLDGLTCVYK 67
Query: 311 SNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDEICD 490
SNVDLFFYVMG+++ENELIL SVLN LY+S+SL+L++N+E+R+++ENL+ +MLAFDEICD
Sbjct: 68 SNVDLFFYVMGNAYENELILLSVLNCLYDSISLILKKNVEKRLVLENLEIIMLAFDEICD 127
Query: 491 GGVILDADPTSIVSRAALRTEDVPL 565
GG+ILDADP+S+V R LR +D+P+
Sbjct: 128 GGIILDADPSSVVKRVDLRNDDIPI 152
>AE014296-2781|AAN11737.1| 163|Drosophila melanogaster CG3948-PC,
isoform C protein.
Length = 163
Score = 237 bits (581), Expect = 6e-63
Identities = 104/141 (73%), Positives = 130/141 (92%)
Frame = +2
Query: 143 MCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEIIMLDGLTCVYKSNVD 322
MCI+D +GNRILAKYYDK++L T KEQKAFEKNLFNKTHR+N EIIMLDGLTCVYKSNVD
Sbjct: 1 MCIMDNDGNRILAKYYDKNILSTLKEQKAFEKNLFNKTHRSNTEIIMLDGLTCVYKSNVD 60
Query: 323 LFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDEICDGGVI 502
LFFYVMG+++ENELIL SVLN LY+S+SL+L++N+E+R+++ENL+ +MLAFDEICDGG+I
Sbjct: 61 LFFYVMGNAYENELILLSVLNCLYDSISLILKKNVEKRLVLENLEIIMLAFDEICDGGII 120
Query: 503 LDADPTSIVSRAALRTEDVPL 565
LDADP+S+V R LR +D+P+
Sbjct: 121 LDADPSSVVKRVDLRNDDIPI 141
>AF145648-1|AAD38623.1| 448|Drosophila melanogaster BcDNA.GH08385
protein.
Length = 448
Score = 31.9 bits (69), Expect = 0.70
Identities = 15/35 (42%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +2
Query: 410 LLRRNMERRVL-MENLDAVMLAFDEICDGGVILDA 511
LL +N ERR L + N+++++ + DE + GV+LDA
Sbjct: 295 LLEKNHERRSLALHNIESLLSSVDEAQNSGVVLDA 329
>AE014296-3346|AAN12125.2| 448|Drosophila melanogaster CG5498-PB
protein.
Length = 448
Score = 31.9 bits (69), Expect = 0.70
Identities = 15/35 (42%), Positives = 25/35 (71%), Gaps = 1/35 (2%)
Frame = +2
Query: 410 LLRRNMERRVL-MENLDAVMLAFDEICDGGVILDA 511
LL +N ERR L + N+++++ + DE + GV+LDA
Sbjct: 295 LLEKNHERRSLALHNIESLLSSVDEAQNSGVVLDA 329
>AY071026-1|AAL48648.1| 191|Drosophila melanogaster RE10615p
protein.
Length = 191
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/78 (23%), Positives = 36/78 (46%)
Frame = +2
Query: 302 VYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDE 481
+Y+ L+F S E+EL + ++ E++ E ++ + DAV E
Sbjct: 64 IYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIF-HADAVHHILSE 122
Query: 482 ICDGGVILDADPTSIVSR 535
+ GG++L + I++R
Sbjct: 123 LVMGGMVLQTNMNDIMAR 140
>AF228056-1|AAG43053.1| 191|Drosophila melanogaster adaptor protein
complex AP-3 smallchain sigma3 protein.
Length = 191
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/78 (23%), Positives = 36/78 (46%)
Frame = +2
Query: 302 VYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDE 481
+Y+ L+F S E+EL + ++ E++ E ++ + DAV E
Sbjct: 64 IYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIF-HADAVHHILSE 122
Query: 482 ICDGGVILDADPTSIVSR 535
+ GG++L + I++R
Sbjct: 123 LVMGGMVLQTNMNDIMAR 140
>AE013599-3755|AAF47120.2| 191|Drosophila melanogaster CG3029-PA
protein.
Length = 191
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/78 (23%), Positives = 36/78 (46%)
Frame = +2
Query: 302 VYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDE 481
+Y+ L+F S E+EL + ++ E++ E ++ + DAV E
Sbjct: 64 IYRHYATLYFVFCVDSSESELGILDLIQVFVETLDKCFENVCELDLIF-HADAVHHILSE 122
Query: 482 ICDGGVILDADPTSIVSR 535
+ GG++L + I++R
Sbjct: 123 LVMGGMVLQTNMNDIMAR 140
>AY061172-1|AAL28720.1| 157|Drosophila melanogaster LD14109p
protein.
Length = 157
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/80 (21%), Positives = 33/80 (41%)
Frame = +2
Query: 302 VYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDE 481
VYK L+F ++NEL+ +++ E + E ++ N + DE
Sbjct: 58 VYKRYASLYFCCAIEQNDNELLTLEIIHRYVELLDKYFGSVCELDIIF-NFEKAYFILDE 116
Query: 482 ICDGGVILDADPTSIVSRAA 541
+ GG I + +++ A
Sbjct: 117 LLIGGEIQETSKKNVLKAIA 136
>AF228054-1|AAG43051.1| 164|Drosophila melanogaster
clathrin-associated adaptor complexAP-1 small chain
sigma1 protein.
Length = 164
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/80 (21%), Positives = 33/80 (41%)
Frame = +2
Query: 302 VYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDE 481
VYK L+F ++NEL+ +++ E + E ++ N + DE
Sbjct: 58 VYKRYASLYFCCAIEQNDNELLTLEIIHRYVELLDKYFGSVCELDIIF-NFEKAYFILDE 116
Query: 482 ICDGGVILDADPTSIVSRAA 541
+ GG I + +++ A
Sbjct: 117 LLIGGEIQETSKKNVLKAIA 136
>AE014297-3422|AAF56212.2| 157|Drosophila melanogaster CG5864-PA
protein.
Length = 157
Score = 28.3 bits (60), Expect = 8.7
Identities = 17/80 (21%), Positives = 33/80 (41%)
Frame = +2
Query: 302 VYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDE 481
VYK L+F ++NEL+ +++ E + E ++ N + DE
Sbjct: 58 VYKRYASLYFCCAIEQNDNELLTLEIIHRYVELLDKYFGSVCELDIIF-NFEKAYFILDE 116
Query: 482 ICDGGVILDADPTSIVSRAA 541
+ GG I + +++ A
Sbjct: 117 LLIGGEIQETSKKNVLKAIA 136
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,782,793
Number of Sequences: 53049
Number of extensions: 523455
Number of successful extensions: 1219
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1217
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2503659279
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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