Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_E02
(609 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g60970.1 68414.m06863 clathrin adaptor complex small chain fa... 133 8e-32
At3g09800.1 68416.m01165 clathrin adaptor complex small chain fa... 126 1e-29
At4g08520.1 68417.m01403 clathrin adaptor complex small chain fa... 119 2e-27
At3g09800.2 68416.m01166 clathrin adaptor complex small chain fa... 110 6e-25
At3g50860.1 68416.m05569 clathrin adaptor complex small chain fa... 42 2e-04
At2g19790.1 68415.m02312 clathrin adaptor complex small chain fa... 36 0.016
At4g24910.1 68417.m03566 hypothetical protein contains Pfam prof... 29 2.4
At3g26060.1 68416.m03245 peroxiredoxin Q, putative similar to pe... 29 2.4
At4g10380.1 68417.m01703 major intrinsic family protein / MIP fa... 28 4.2
At5g08640.1 68418.m01027 flavonol synthase 1 (FLS1) identical to... 28 5.6
At4g34350.1 68417.m04881 LytB family protein contains Pfam profi... 28 5.6
At2g22630.1 68415.m02682 MADS-box protein (AGL17) nearly identic... 27 9.7
>At1g60970.1 68414.m06863 clathrin adaptor complex small chain
family protein contains Pfam profile: PF01217 clathrin
adaptor complex small chain
Length = 177
Score = 133 bits (322), Expect = 8e-32
Identities = 66/145 (45%), Positives = 93/145 (64%), Gaps = 4/145 (2%)
Frame = +2
Query: 134 VKGMCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANA----EIIMLDGLTC 301
VK + +LD EG R+ KYY D PT Q+AFEK++F KT + NA E+ L+
Sbjct: 7 VKNILLLDSEGKRVAVKYYSDD-WPTNSAQEAFEKSVFTKTQKTNARTEVEVTALENNIV 65
Query: 302 VYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDE 481
VYK DL F+V G ENELIL SVL L+++V+LLLR N+++R ++NLD + L+FDE
Sbjct: 66 VYKFVQDLHFFVTGGEEENELILASVLEGLFDAVTLLLRSNVDKREALDNLDLIFLSFDE 125
Query: 482 ICDGGVILDADPTSIVSRAALRTED 556
I DGG++L+ D I +A + + D
Sbjct: 126 IIDGGIVLETDANVIAGKAGINSTD 150
>At3g09800.1 68416.m01165 clathrin adaptor complex small chain
family protein contains Pfam profile: PF01217 clathrin
adaptor complex small chain
Length = 179
Score = 126 bits (304), Expect = 1e-29
Identities = 64/146 (43%), Positives = 92/146 (63%), Gaps = 4/146 (2%)
Frame = +2
Query: 131 IVKGMCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANA----EIIMLDGLT 298
+VK + +LD EG R+ KYY D PT + +FEK +F+KT + NA EI +LD
Sbjct: 8 LVKNILLLDSEGKRVAVKYYSDD-WPTNAAKLSFEKYVFSKTSKTNARTEAEITLLDSNI 66
Query: 299 CVYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFD 478
VYK DL F+V G +ENELIL SVL +++V+LLLR N+E+ +ENLD + L D
Sbjct: 67 IVYKFAQDLHFFVTGGENENELILASVLQGFFDAVALLLRSNVEKMEALENLDLIFLCLD 126
Query: 479 EICDGGVILDADPTSIVSRAALRTED 556
E+ D GV+L+ DP I + A+++ +
Sbjct: 127 EMVDQGVVLETDPNVIAGKVAMQSTE 152
>At4g08520.1 68417.m01403 clathrin adaptor complex small chain
family protein contains Pfam profile: PF01217 clathrin
adaptor complex small chain
Length = 181
Score = 119 bits (286), Expect = 2e-27
Identities = 60/146 (41%), Positives = 90/146 (61%), Gaps = 4/146 (2%)
Frame = +2
Query: 131 IVKGMCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANA----EIIMLDGLT 298
+VK + +LD EG R+ KYY D T + AFEK +F+KT + NA EI +L+
Sbjct: 10 LVKNILLLDSEGKRVAVKYYSDD-WATNASKLAFEKYVFSKTSKTNARTEAEITLLESNI 68
Query: 299 CVYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFD 478
VYK DL F+V G +ENEL+L SVL +++V+LLLR N+E+ +ENLD + L D
Sbjct: 69 VVYKFAQDLHFFVTGGENENELVLSSVLQGFFDAVALLLRNNVEKMEALENLDLIFLCLD 128
Query: 479 EICDGGVILDADPTSIVSRAALRTED 556
E+ D G++L+ D I + A+++ +
Sbjct: 129 EMVDQGMVLETDANVIAGKVAMQSAE 154
>At3g09800.2 68416.m01166 clathrin adaptor complex small chain
family protein contains Pfam profile: PF01217 clathrin
adaptor complex small chain
Length = 138
Score = 110 bits (265), Expect = 6e-25
Identities = 58/126 (46%), Positives = 79/126 (62%), Gaps = 4/126 (3%)
Frame = +2
Query: 131 IVKGMCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANA----EIIMLDGLT 298
+VK + +LD EG R+ KYY D PT + +FEK +F+KT + NA EI +LD
Sbjct: 8 LVKNILLLDSEGKRVAVKYYSDD-WPTNAAKLSFEKYVFSKTSKTNARTEAEITLLDSNI 66
Query: 299 CVYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFD 478
VYK DL F+V G +ENELIL SVL +++V+LLLR N+E+ +ENLD + L D
Sbjct: 67 IVYKFAQDLHFFVTGGENENELILASVLQGFFDAVALLLRSNVEKMEALENLDLIFLCLD 126
Query: 479 EICDGG 496
E+ D G
Sbjct: 127 EMVDQG 132
>At3g50860.1 68416.m05569 clathrin adaptor complex small chain
family protein contains Pfam profile: PF01217 clathrin
adaptor complex small chain
Length = 166
Score = 42.3 bits (95), Expect = 2e-04
Identities = 33/141 (23%), Positives = 63/141 (44%), Gaps = 8/141 (5%)
Frame = +2
Query: 131 IVKGMCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLF--------NKTHRANAEIIML 286
++K + +++ +G LAK+YD LP K+Q+ + +F N ++ E +
Sbjct: 1 MIKAVMMMNTQGKPRLAKFYD--YLPVEKQQELI-RGVFSVLCSRPENVSNFLEIESLFG 57
Query: 287 DGLTCVYKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVM 466
VYK L+F ++ ENEL + ++ L E++ E ++ N +
Sbjct: 58 PDSRLVYKHYATLYFVLVFDGSENELAMLDLIQVLVETLDKCFSNVCELDIVF-NYSKMH 116
Query: 467 LAFDEICDGGVILDADPTSIV 529
DEI GG +L+ ++
Sbjct: 117 AVLDEIVFGGQVLETSSAEVM 137
>At2g19790.1 68415.m02312 clathrin adaptor complex small chain
family protein contains Pfam profile: PF01217 clathrin
adaptor complex small chain
Length = 143
Score = 36.3 bits (80), Expect = 0.016
Identities = 31/136 (22%), Positives = 62/136 (45%), Gaps = 3/136 (2%)
Frame = +2
Query: 134 VKGMCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAE---IIMLDGLTCV 304
++ + +++ +G LA+YY+ T +E++A E + K N + + V
Sbjct: 3 IRFILMVNKQGQTRLAQYYE---WLTLEERRALEGEIVRKCLARNDQQCSFVEHRNYKIV 59
Query: 305 YKSNVDLFFYVMGSSHENELILQSVLNALYESVSLLLRRNMERRVLMENLDAVMLAFDEI 484
Y+ LFF V ENEL + ++ L E++ N+ +M +L+ +E+
Sbjct: 60 YRRYASLFFMVGVDDDENELAILEFIHLLVETMDKHF-GNVCELDIMFHLEKAHFMLEEM 118
Query: 485 CDGGVILDADPTSIVS 532
G I++ +I+S
Sbjct: 119 VMNGCIVETSKANILS 134
>At4g24910.1 68417.m03566 hypothetical protein contains Pfam profile
PF04669: Protein of unknown function (DUF579)
Length = 315
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/38 (34%), Positives = 20/38 (52%)
Frame = +3
Query: 444 WRTWMLLCLPSMRSATAV*YWMLIPRRS*AGQRCAPRT 557
W +W LC ++ SA + I R+S A + C+P T
Sbjct: 274 WLSWEFLCQENLVSAKGTFWKFRIKRQSNASRFCSPET 311
>At3g26060.1 68416.m03245 peroxiredoxin Q, putative similar to
peroxiredoxin Q [Sedum lineare] GI:6899842; contains
Pfam profile: PF00578 AhpC/TSA (alkyl hydroperoxide
reductase and thiol-specific antioxidant) family
Length = 216
Score = 29.1 bits (62), Expect = 2.4
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = +2
Query: 137 KGMCILDYEGNRILAKYYDKDVLPTTKEQKAFEKNLFNKTHRANAEIIMLDG 292
K + + Y+G ++ +Y D P +Q ++ + K +A AE+I + G
Sbjct: 86 KPVSLKKYKGKPVVLYFYPADETPGCTKQACAFRDSYEKFKKAGAEVIGISG 137
>At4g10380.1 68417.m01703 major intrinsic family protein / MIP
family protein contains Pfam profile: MIP PF00230
Length = 304
Score = 28.3 bits (60), Expect = 4.2
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 554 PRCAALPGLRSTWDQH 507
PRC LP + STW QH
Sbjct: 47 PRCKCLPVMGSTWGQH 62
>At5g08640.1 68418.m01027 flavonol synthase 1 (FLS1) identical to
SP|Q96330; contains PF03171 2OG-Fe(II) oxygenase
superfamily
Length = 336
Score = 27.9 bits (59), Expect = 5.6
Identities = 11/30 (36%), Positives = 13/30 (43%)
Frame = -2
Query: 257 ESY*TNSSQMPSAP*LWVGRLYRNIWPKFC 168
E Y T + P WV L+ IWP C
Sbjct: 113 EGYGTKLQKDPEGKKAWVDHLFHRIWPPSC 142
>At4g34350.1 68417.m04881 LytB family protein contains Pfam profile:
PF02401 LytB protein
Length = 466
Score = 27.9 bits (59), Expect = 5.6
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 8/76 (10%)
Frame = +2
Query: 287 DGLTCVYKSNVDLFFYVM--GSSHENELILQSVLNALY------ESVSLLLRRNMERRVL 442
DG + + ++ F Y + G +N+L+ + N E + LL M R+
Sbjct: 276 DGSSSTKEEFMEKFKYAISKGFDPDNDLVKVGIANQTTMLKGETEEIGRLLETTMMRKYG 335
Query: 443 MENLDAVMLAFDEICD 490
+EN+ ++F+ ICD
Sbjct: 336 VENVSGHFISFNTICD 351
>At2g22630.1 68415.m02682 MADS-box protein (AGL17) nearly identical
to MADS-box protein AGL17 [Arabidopsis thaliana]
GI:862648
Length = 227
Score = 27.1 bits (57), Expect = 9.7
Identities = 15/51 (29%), Positives = 28/51 (54%)
Frame = +2
Query: 248 NKTHRANAEIIMLDGLTCVYKSNVDLFFYVMGSSHENELILQSVLNALYES 400
N H N E+ + +++ NV+L+ G+S+ N L +++A+YES
Sbjct: 157 NLVHHENLELSRK--VQRIHQENVELYKKAYGTSNTNGLGHHELVDAVYES 205
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,851,700
Number of Sequences: 28952
Number of extensions: 247916
Number of successful extensions: 658
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 629
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 649
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1216725696
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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