Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_D21
         (656 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    23   2.6  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    23   2.6  
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    23   3.4  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    21   7.8  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 311 RCWICKYNKCGCLG 352
           RC  C+Y KC  +G
Sbjct: 161 RCQYCRYQKCLAMG 174


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = +2

Query: 311 RCWICKYNKCGCLG 352
           RC  C+Y KC  +G
Sbjct: 161 RCQYCRYQKCLAMG 174


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 263 NTDHWLW*FKFERGP 307
           N ++WLW    ERGP
Sbjct: 68  NVNNWLWTPFIERGP 82


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 83  SFYKHQTFIMNLLPRSHKE 139
           SF  HQ +  NL+PR  K+
Sbjct: 35  SFSVHQVYPENLIPRLAKK 53


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,559
Number of Sequences: 438
Number of extensions: 3570
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)