Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_D19
(524 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 365 e-103
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 353 e-100
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 293 5e-82
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 260 5e-72
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 36 3e-04
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 1.9
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 2.5
AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase pro... 21 5.8
DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein ... 21 7.7
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 7.7
AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein ... 21 7.7
AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific pro... 21 7.7
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 21 7.7
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 365 bits (897), Expect = e-103
Identities = 172/174 (98%), Positives = 172/174 (98%)
Frame = +3
Query: 3 GHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSK 182
GHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSK
Sbjct: 25 GHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSK 84
Query: 183 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLG 362
YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLG
Sbjct: 85 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLG 144
Query: 363 VKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPXAVAFVPISGWHG 524
VKQLIVGVNKMDSTEPPYSE RFEEIKKEVSSYIKKIGYNP AVAFVPISGWHG
Sbjct: 145 VKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPISGWHG 198
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 353 bits (869), Expect = e-100
Identities = 166/174 (95%), Positives = 169/174 (97%)
Frame = +3
Query: 3 GHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETSK 182
GHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFET+K
Sbjct: 25 GHLIYKCGGIDKRTIEKFEKEAQEMGKGSFKYAWVLDKLKAERERGITIDIALWKFETAK 84
Query: 183 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLG 362
YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAG GEFEAGISKNGQTREHALLAFTLG
Sbjct: 85 YYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGIGEFEAGISKNGQTREHALLAFTLG 144
Query: 363 VKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPXAVAFVPISGWHG 524
VKQLIVGVNKMD T+PPYSE RFEEIKKEVSSYIKKIGYN +VAFVPISGWHG
Sbjct: 145 VKQLIVGVNKMDMTDPPYSEARFEEIKKEVSSYIKKIGYNTASVAFVPISGWHG 198
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 293 bits (720), Expect = 5e-82
Identities = 139/141 (98%), Positives = 139/141 (98%)
Frame = +3
Query: 102 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 281
WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA
Sbjct: 1 WVLDKLKAERERGITIDIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVA 60
Query: 282 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSY 461
AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSE RFEEIKKEVSSY
Sbjct: 61 AGTGEFEAGISKNGQTREHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSY 120
Query: 462 IKKIGYNPXAVAFVPISGWHG 524
IKKIGYNP AVAFVPISGWHG
Sbjct: 121 IKKIGYNPAAVAFVPISGWHG 141
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 260 bits (638), Expect = 5e-72
Identities = 123/125 (98%), Positives = 123/125 (98%)
Frame = +3
Query: 150 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 329
DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT
Sbjct: 1 DIALWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQT 60
Query: 330 REHALLAFTLGVKQLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPXAVAFVPI 509
REHALLAFTLGVKQLIVGVNKMDSTEPPYSE RFEEIKKEVSSYIKKIGYNP AVAFVPI
Sbjct: 61 REHALLAFTLGVKQLIVGVNKMDSTEPPYSETRFEEIKKEVSSYIKKIGYNPAAVAFVPI 120
Query: 510 SGWHG 524
SGWHG
Sbjct: 121 SGWHG 125
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 35.5 bits (78), Expect = 3e-04
Identities = 32/109 (29%), Positives = 47/109 (43%)
Frame = +3
Query: 189 VTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGTGEFEAGISKNGQTREHALLAFTLGVK 368
VT +D PGH FI G D VL+VAA G E QT + +A V
Sbjct: 195 VTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDGVKE-------QTLQSIEMAKDAKV- 246
Query: 369 QLIVGVNKMDSTEPPYSEPRFEEIKKEVSSYIKKIGYNPXAVAFVPISG 515
+IV +NK+D + ++E K + I+++G V + G
Sbjct: 247 PIIVAINKIDKPNIDIIKVQYELAKHGI--VIEELGGEIQCVKISALKG 293
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 1.9
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +3
Query: 174 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 275
T KYY D P + FIKN+ ++ +D LI
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLI 327
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 22.6 bits (46), Expect = 2.5
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 174 TSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLI 275
T KYY D P + FIKN+ ++ +D L+
Sbjct: 294 TMKYYDYGADFPFNFAFIKNVSRDSNSSDFKKLV 327
>AB253416-1|BAE86927.1| 580|Apis mellifera alpha-glucosidase
protein.
Length = 580
Score = 21.4 bits (43), Expect = 5.8
Identities = 7/20 (35%), Positives = 13/20 (65%)
Frame = +1
Query: 394 WIPLNHHTVSPDLRKSRRKY 453
W+P+N + S +L +R+Y
Sbjct: 443 WLPVNENYKSLNLAAQKREY 462
>DQ855484-1|ABH88171.1| 130|Apis mellifera chemosensory protein 3
protein.
Length = 130
Score = 21.0 bits (42), Expect = 7.7
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 33 DKRTIEKFEKEAQEMG 80
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.0 bits (42), Expect = 7.7
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = -1
Query: 335 LTGLTVLRDTSFEFTGTGSYDEHSAISLR 249
LTGLTVLR + + S E S R
Sbjct: 257 LTGLTVLRTFNASYNSLDSLPEGLFASTR 285
>AJ973401-1|CAJ01448.1| 130|Apis mellifera hypothetical protein
protein.
Length = 130
Score = 21.0 bits (42), Expect = 7.7
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 33 DKRTIEKFEKEAQEMG 80
DK+ KFE+EA+++G
Sbjct: 112 DKKFRVKFEEEAKKLG 127
>AF481963-1|AAN59784.1| 130|Apis mellifera antennal-specific
protein 3c precursor protein.
Length = 130
Score = 21.0 bits (42), Expect = 7.7
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 33 DKRTIEKFEKEAQEMG 80
DK+ KFE+EA+++G
Sbjct: 112 DKKYRVKFEEEAKKLG 127
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 21.0 bits (42), Expect = 7.7
Identities = 8/18 (44%), Positives = 12/18 (66%)
Frame = -1
Query: 446 LLDFLKSGLTVWWFSGIH 393
L F++SG+T W S I+
Sbjct: 56 LSHFIESGITAIWLSPIN 73
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,877
Number of Sequences: 438
Number of extensions: 2975
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14722920
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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