Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_D14
         (602 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U37429-15|AAN63412.1|  195|Caenorhabditis elegans Peroxiredoxin ...   283   5e-77
Z32683-2|CAA83619.1|  226|Caenorhabditis elegans Hypothetical pr...   246   7e-66
AC024761-15|AAM97968.1|  231|Caenorhabditis elegans Hypothetical...    65   3e-11
Z83232-1|CAB05755.3| 1764|Caenorhabditis elegans Hypothetical pr...    30   1.1  
AB162421-1|BAD36749.1| 1766|Caenorhabditis elegans plexin protein.     30   1.1  
Z81070-10|CAB03004.1|  163|Caenorhabditis elegans Hypothetical p...    29   2.6  
Z82095-7|CAN86628.1|  390|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z82095-6|CAI79281.2|  412|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z82095-5|CAB05026.2|  414|Caenorhabditis elegans Hypothetical pr...    29   3.4  
AF003135-7|AAK18991.1|  254|Caenorhabditis elegans Hypothetical ...    29   3.4  
AF003135-6|AAK18988.2|  288|Caenorhabditis elegans Hypothetical ...    29   3.4  
Z34533-1|CAA84302.3|  730|Caenorhabditis elegans Hypothetical pr...    28   4.5  
Z46935-4|CAA87051.1|  270|Caenorhabditis elegans Hypothetical pr...    28   5.9  
Z18854-1|CAA79306.1|  270|Caenorhabditis elegans capping protein...    28   5.9  
Z18806-1|CAA79270.1|  270|Caenorhabditis elegans capping protein...    28   5.9  
AF025453-4|ABC48262.1|  905|Caenorhabditis elegans Hypothetical ...    27   7.8  

>U37429-15|AAN63412.1|  195|Caenorhabditis elegans Peroxiredoxin
           protein 2 protein.
          Length = 195

 Score =  283 bits (695), Expect = 5e-77
 Identities = 130/167 (77%), Positives = 145/167 (86%)
 Frame = +3

Query: 99  KPAPQFKATAVVNGEFKDISLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIG 278
           KPAPQFK  AVV+GEF D+SLSDYKGKYVVLFFYPLDFTFVCPTEIIAFS++A+EF+ I 
Sbjct: 8   KPAPQFKTQAVVDGEFVDVSLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSDRAEEFKAIN 67

Query: 279 CEVLGASTDSHFTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGL 458
             VL ASTDS F+HLAWIN PRK GGLG MNIP+++D +H+ISRDYGVL E+ GI FRGL
Sbjct: 68  TVVLAASTDSVFSHLAWINQPRKHGGLGEMNIPVLADTNHQISRDYGVLKEDEGIAFRGL 127

Query: 459 FIIDDKQNLRQITINDLPVGRSVEXTLRLVQAFQFTDXHGEVCPANW 599
           FIID  QNLRQITINDLPVGRSV+ TLRLVQAFQF + HGEVCPA W
Sbjct: 128 FIIDPSQNLRQITINDLPVGRSVDETLRLVQAFQFVEKHGEVCPAGW 174


>Z32683-2|CAA83619.1|  226|Caenorhabditis elegans Hypothetical
           protein R07E5.2 protein.
          Length = 226

 Score =  246 bits (603), Expect = 7e-66
 Identities = 107/172 (62%), Positives = 139/172 (80%)
 Frame = +3

Query: 84  PLQMTKPAPQFKATAVVNGEFKDISLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADE 263
           PL      P FK TAVV+G+FK IS  DYKGK++V+FFYPLDFTFVCPTEIIA+ ++A+E
Sbjct: 32  PLGPKNTVPAFKGTAVVDGDFKVISDQDYKGKWLVMFFYPLDFTFVCPTEIIAYGDRANE 91

Query: 264 FRKIGCEVLGASTDSHFTHLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGI 443
           FR +G EV+  S DSHF+HLAW+NTPRK GGLG M+IPL++D + +I+  +GVLD+E+G+
Sbjct: 92  FRSLGAEVVACSCDSHFSHLAWVNTPRKDGGLGDMDIPLLADFNKKIADSFGVLDKESGL 151

Query: 444 PFRGLFIIDDKQNLRQITINDLPVGRSVEXTLRLVQAFQFTDXHGEVCPANW 599
            +RGLF+ID    +R  T NDLPVGRSV+ TLR+++AFQF+D HGEVCPA+W
Sbjct: 152 SYRGLFLIDPSGTVRHTTCNDLPVGRSVDETLRVLKAFQFSDKHGEVCPADW 203


>AC024761-15|AAM97968.1|  231|Caenorhabditis elegans Hypothetical
           protein Y38C1AA.11 protein.
          Length = 231

 Score = 65.3 bits (152), Expect = 3e-11
 Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 11/162 (6%)
 Frame = +3

Query: 147 KDISLSDYKGK-YVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVLGASTDSHFTHL 323
           K+ +L +Y G+ +++LF +P DFT VC TE+    + A EFRK   ++L  S DS  TH 
Sbjct: 18  KNQTLHNYIGEQWLMLFSHPADFTPVCTTELAELVKLAPEFRKRHVQILAISIDSSETHR 77

Query: 324 AW---INTPRKQGGLGP-MNIPLISDKSHRISRDYGVLD------EETGIPFRGLFIIDD 473
            W   IN+  +    G  +   +I+D    I  + G++D      E   +  R + +   
Sbjct: 78  DWAKDINSVAQLSNCGSHLPFEIIADTDRSICTELGMIDPDEMNSEGICLSARAVMLFGP 137

Query: 474 KQNLRQITINDLPVGRSVEXTLRLVQAFQFTDXHGEVCPANW 599
            + L+   +     GR+    LR+V   Q         PANW
Sbjct: 138 DKKLKSKILYPATFGRNFVEILRMVDGVQLGTKAPVATPANW 179


>Z83232-1|CAB05755.3| 1764|Caenorhabditis elegans Hypothetical
           protein K04B12.1 protein.
          Length = 1764

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 538 CGWCRPSSSRTXTARCAPP 594
           C WC P+ S T +ARC  P
Sbjct: 462 CQWCHPTQSCTTSARCTSP 480


>AB162421-1|BAD36749.1| 1766|Caenorhabditis elegans plexin protein.
          Length = 1766

 Score = 30.3 bits (65), Expect = 1.1
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +1

Query: 538 CGWCRPSSSRTXTARCAPP 594
           C WC P+ S T +ARC  P
Sbjct: 464 CQWCHPTQSCTTSARCTSP 482


>Z81070-10|CAB03004.1|  163|Caenorhabditis elegans Hypothetical
           protein F26E4.12 protein.
          Length = 163

 Score = 29.1 bits (62), Expect = 2.6
 Identities = 19/54 (35%), Positives = 25/54 (46%)
 Frame = +3

Query: 129 VVNGEFKDISLSDYKGKYVVLFFYPLDFTFVCPTEIIAFSEKADEFRKIGCEVL 290
           V N    D+SLSDYKGK V++         +         E  D ++K G EVL
Sbjct: 9   VKNANGDDVSLSDYKGK-VLIIVNVASQCGLTNKNYTQLKELLDVYKKDGLEVL 61


>Z82095-7|CAN86628.1|  390|Caenorhabditis elegans Hypothetical
           protein ZK849.2c protein.
          Length = 390

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -1

Query: 512 GQVVDGDLPEVLLVVDDEESSEGDARLLVQHS 417
           GQV  GDL   L+ V  +E S+ D  + ++HS
Sbjct: 331 GQVQQGDLDLELVFVCPDEDSDDDGTVTIEHS 362


>Z82095-6|CAI79281.2|  412|Caenorhabditis elegans Hypothetical
           protein ZK849.2b protein.
          Length = 412

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -1

Query: 512 GQVVDGDLPEVLLVVDDEESSEGDARLLVQHS 417
           GQV  GDL   L+ V  +E S+ D  + ++HS
Sbjct: 353 GQVQQGDLDLELVFVCPDEDSDDDGTVTIEHS 384


>Z82095-5|CAB05026.2|  414|Caenorhabditis elegans Hypothetical
           protein ZK849.2a protein.
          Length = 414

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 13/32 (40%), Positives = 19/32 (59%)
 Frame = -1

Query: 512 GQVVDGDLPEVLLVVDDEESSEGDARLLVQHS 417
           GQV  GDL   L+ V  +E S+ D  + ++HS
Sbjct: 355 GQVQQGDLDLELVFVCPDEDSDDDGTVTIEHS 386


>AF003135-7|AAK18991.1|  254|Caenorhabditis elegans Hypothetical
           protein W03F11.5b protein.
          Length = 254

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 19/72 (26%), Positives = 34/72 (47%)
 Frame = -1

Query: 566 RELEGLHQPQGXLHRPPHGQVVDGDLPEVLLVVDDEESSEGDARLLVQHSVVARDAVRLV 387
           + L G+  P     RP + Q+ DG+  + + +VDD +    +  + V+ S +  D+ R  
Sbjct: 79  KTLAGIQMPFSLTGRPMNLQI-DGESHDAVSLVDDPKKRNNEKSMEVRRSDMTPDSRRAF 137

Query: 386 AYQRNVHGTESA 351
              R V   +SA
Sbjct: 138 LRARQVCLEQSA 149


>AF003135-6|AAK18988.2|  288|Caenorhabditis elegans Hypothetical
           protein W03F11.5a protein.
          Length = 288

 Score = 28.7 bits (61), Expect = 3.4
 Identities = 19/72 (26%), Positives = 34/72 (47%)
 Frame = -1

Query: 566 RELEGLHQPQGXLHRPPHGQVVDGDLPEVLLVVDDEESSEGDARLLVQHSVVARDAVRLV 387
           + L G+  P     RP + Q+ DG+  + + +VDD +    +  + V+ S +  D+ R  
Sbjct: 113 KTLAGIQMPFSLTGRPMNLQI-DGESHDAVSLVDDPKKRNNEKSMEVRRSDMTPDSRRAF 171

Query: 386 AYQRNVHGTESA 351
              R V   +SA
Sbjct: 172 LRARQVCLEQSA 183


>Z34533-1|CAA84302.3|  730|Caenorhabditis elegans Hypothetical
           protein B0285.1 protein.
          Length = 730

 Score = 28.3 bits (60), Expect = 4.5
 Identities = 13/40 (32%), Positives = 18/40 (45%)
 Frame = +2

Query: 365 HEHSSDKRQVAPHLSRLRSAGRGDGHPLPRTLHHRRQAEP 484
           HE  S K++ +  L R      G GH +  T H R   +P
Sbjct: 625 HEMWSKKQKKSARLGRQAEGSSGSGHSIRATSHPRAPTQP 664


>Z46935-4|CAA87051.1|  270|Caenorhabditis elegans Hypothetical
           protein M106.5 protein.
          Length = 270

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 18/70 (25%), Positives = 35/70 (50%)
 Frame = +3

Query: 315 THLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLFIIDDKQNLRQI 494
           T + W+ T +   G+  MN+     + H +  D  + D+ T +   G  I D +  +R +
Sbjct: 171 TIMLWLQTNKSSSGV--MNLGGSLTRQHEM--DAPINDQNTHLANMGRMIEDQESKMR-L 225

Query: 495 TINDLPVGRS 524
           TIN++  G++
Sbjct: 226 TINEIYFGKT 235


>Z18854-1|CAA79306.1|  270|Caenorhabditis elegans capping protein
           beta subunit protein.
          Length = 270

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 18/70 (25%), Positives = 35/70 (50%)
 Frame = +3

Query: 315 THLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLFIIDDKQNLRQI 494
           T + W+ T +   G+  MN+     + H +  D  + D+ T +   G  I D +  +R +
Sbjct: 171 TIMLWLQTNKSSSGV--MNLGGSLTRQHEM--DAPINDQNTHLANMGRMIEDQESKMR-L 225

Query: 495 TINDLPVGRS 524
           TIN++  G++
Sbjct: 226 TINEIYFGKT 235


>Z18806-1|CAA79270.1|  270|Caenorhabditis elegans capping protein
           beta subunit protein.
          Length = 270

 Score = 27.9 bits (59), Expect = 5.9
 Identities = 18/70 (25%), Positives = 35/70 (50%)
 Frame = +3

Query: 315 THLAWINTPRKQGGLGPMNIPLISDKSHRISRDYGVLDEETGIPFRGLFIIDDKQNLRQI 494
           T + W+ T +   G+  MN+     + H +  D  + D+ T +   G  I D +  +R +
Sbjct: 171 TIMLWLQTNKSSSGV--MNLGGSLTRQHEM--DAPINDQNTHLANMGRMIEDQESKMR-L 225

Query: 495 TINDLPVGRS 524
           TIN++  G++
Sbjct: 226 TINEIYFGKT 235


>AF025453-4|ABC48262.1|  905|Caenorhabditis elegans Hypothetical
           protein C08F1.5b protein.
          Length = 905

 Score = 27.5 bits (58), Expect = 7.8
 Identities = 13/22 (59%), Positives = 14/22 (63%)
 Frame = +2

Query: 2   DFYFKSESFSGAFGFRLLFKSL 67
           DFYF  E F+ AFGF   F SL
Sbjct: 176 DFYFVKEGFNSAFGFS-FFPSL 196


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,702,861
Number of Sequences: 27780
Number of extensions: 227600
Number of successful extensions: 910
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 897
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)