Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_D13
(499 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g42390.1 68418.m05161 metalloendopeptidase identical to chlor... 33 0.14
At1g64820.1 68414.m07349 MATE efflux family protein similar to r... 32 0.25
At3g05900.1 68416.m00664 neurofilament protein-related similar t... 31 0.33
At3g23280.2 68416.m02935 zinc finger (C3HC4-type RING finger) fa... 28 3.0
At4g19600.1 68417.m02880 cyclin family protein similar to cyclin... 28 4.0
At3g23880.1 68416.m03001 F-box family protein contains F-box dom... 27 5.3
At1g76360.1 68414.m08872 protein kinase, putative similar to pro... 27 5.3
At1g51040.1 68414.m05737 phosphatidylinositol 4-kinase, putative... 27 5.3
At1g21610.2 68414.m02703 wound-responsive family protein similar... 27 5.3
At1g21610.1 68414.m02702 wound-responsive family protein similar... 27 5.3
At3g22010.1 68416.m02777 receptor-like protein kinase-related co... 27 7.0
At5g66470.1 68418.m08382 expressed protein 27 9.3
At3g23280.1 68416.m02934 zinc finger (C3HC4-type RING finger) fa... 27 9.3
At2g36010.2 68415.m04421 E2F transcription factor-3 (E2F3) ident... 27 9.3
At2g17430.1 68415.m02011 seven transmembrane MLO family protein ... 27 9.3
>At5g42390.1 68418.m05161 metalloendopeptidase identical to
chloroplast processing enzyme metalloendopeptidase
[Arabidopsis thaliana] gi|2827039|gb|AAC39482
Length = 1265
Score = 32.7 bits (71), Expect = 0.14
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +2
Query: 188 PTKNFKMDTLAFTEDNYLQDEILDDIKQGTIAPC-SQPEKQIKLNLKSERKCDETT 352
PTK +D + ++ N DEI++ +K G +AP ++PE ++ L S+ + E T
Sbjct: 683 PTK-VHVDGVGESDFNISPDEIIESVKSGLLAPIEAEPELEVPKELISQSQLKELT 737
>At1g64820.1 68414.m07349 MATE efflux family protein similar to
ripening regulated protein DDTFR18 [Lycopersicon
esculentum] GI:12231296; contains Pfam profile PF01554:
Uncharacterized membrane protein family; contains 12
transmembrane domains, PMID: 11152613
Length = 502
Score = 31.9 bits (69), Expect = 0.25
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Frame = -3
Query: 458 GMICFHVSYRWML-YECLFLLI---CSIHGEYFLNVFEFLW 348
G +CFH+ + W+L Y+ F ++ SI Y+LNVF LW
Sbjct: 188 GALCFHIPFCWLLVYKLKFGIVGAALSIGFSYWLNVF-LLW 227
>At3g05900.1 68416.m00664 neurofilament protein-related similar to
NF-180 (GI:632549) [Petromyzon marinus] similar to
Neurofilament triplet H protein (200 kDa neurofilament
protein) (Neurofilament heavy polypeptide) (NF-H)
(Swiss-Prot:P12036) [Homo sapiens]
Length = 673
Score = 31.5 bits (68), Expect = 0.33
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 2/97 (2%)
Frame = +2
Query: 170 PTDEKSPTKNFKMDTL--AFTEDNYLQDEILDDIKQGTIAPCSQPEKQIKLNLKSERKCD 343
P E ++ +D + A TE+ ++ DE ++ K + PEK + +N S+ K
Sbjct: 330 PIKETEGDASYPIDVIEKAITEEKHVVDEPANEEKPSESSAALSPEKVVPINQDSDTKPK 389
Query: 344 ETTKTQIHSENTLHGYCILKEKGTHITSNDMKHESRS 454
E T+ + + I +EK ++ K E+ S
Sbjct: 390 EETEGDAAAPADVIEKAITEEK--YVVDEPSKDETTS 424
Score = 29.5 bits (63), Expect = 1.3
Identities = 20/82 (24%), Positives = 34/82 (41%)
Frame = +2
Query: 218 AFTEDNYLQDEILDDIKQGTIAPCSQPEKQIKLNLKSERKCDETTKTQIHSENTLHGYCI 397
A TE+ ++ +E D K PEK + N S+ + + T+ + S + I
Sbjct: 464 AITEEKHVVEEPSKDEKTSESGSALSPEKVVPTNQDSDTEPKKETEGDVPSPADVIEKAI 523
Query: 398 LKEKGTHITSNDMKHESRSFHE 463
EK H+ +K E + E
Sbjct: 524 TDEK--HVVEEPLKDEQENVSE 543
Score = 27.9 bits (59), Expect = 4.0
Identities = 20/79 (25%), Positives = 31/79 (39%)
Frame = +2
Query: 218 AFTEDNYLQDEILDDIKQGTIAPCSQPEKQIKLNLKSERKCDETTKTQIHSENTLHGYCI 397
A TE+ Y+ DE D PEK + N + + + T+ + S + I
Sbjct: 406 AITEEKYVVDEPSKDETTSESGSALCPEKAVPTNQDLDTEPKKETEEDVSSPADIIEKAI 465
Query: 398 LKEKGTHITSNDMKHESRS 454
+EK H+ K E S
Sbjct: 466 TEEK--HVVEEPSKDEKTS 482
>At3g23280.2 68416.m02935 zinc finger (C3HC4-type RING finger)
family protein / ankyrin repeat family protein contains
Pfam profile: PF00097 zinc finger, C3HC4 type (RING
finger) and Pfam profile: PF00023 ankyrin repeat
Length = 438
Score = 28.3 bits (60), Expect = 3.0
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 3/72 (4%)
Frame = +2
Query: 158 ITVIPTDEKSPTKNFKMDTLAFTEDNYLQDEILDDIKQGTIAP---CSQPEKQIKLNLKS 328
+ ++PT ++PTK FK++ + + L D + T+ P + E + K + S
Sbjct: 162 VVIVPTGSRNPTKPFKLELVVYAS--------LQDAQPRTVMPLWKANLEEPKAKQSDTS 213
Query: 329 ERKCDETTKTQI 364
D +TKT++
Sbjct: 214 VMIVDNSTKTRL 225
>At4g19600.1 68417.m02880 cyclin family protein similar to cyclin
T2a [Homo sapiens] GI:2981198; contains Pfam profile
PF00134: Cyclin, N-terminal domain
Length = 541
Score = 27.9 bits (59), Expect = 4.0
Identities = 11/34 (32%), Positives = 21/34 (61%)
Frame = -2
Query: 408 FSFNMQYPWRVFSECI*VFVVSSHFLSDLRFNFI 307
F FN+ +P++ E I F V+ + L+ + +NF+
Sbjct: 171 FDFNVYHPYKPLVEAIKKFKVAQNALAQVAWNFV 204
>At3g23880.1 68416.m03001 F-box family protein contains F-box domain
Pfam:PF00646
Length = 364
Score = 27.5 bits (58), Expect = 5.3
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -3
Query: 461 HGMICFHVSYRWMLY 417
HG++CFHV Y LY
Sbjct: 117 HGLVCFHVDYDKSLY 131
>At1g76360.1 68414.m08872 protein kinase, putative similar to
protein kinase APK1B, SWISS-PROT:P46573; contains
protein kinase domain, Pfam:PF00069
Length = 484
Score = 27.5 bits (58), Expect = 5.3
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +1
Query: 1 WQCKQRFLGRAHAP 42
WQC+ RFLG+ H P
Sbjct: 214 WQCEVRFLGKFHHP 227
>At1g51040.1 68414.m05737 phosphatidylinositol 4-kinase, putative
similar to phosphatidylinositol 4-kinase alpha [Daucus
carota] GI:3452273; contains Pfam profile PF00454:
Phosphatidylinositol 3- and 4-kinase
Length = 525
Score = 27.5 bits (58), Expect = 5.3
Identities = 13/34 (38%), Positives = 22/34 (64%)
Frame = -1
Query: 406 FF*YAVSMESIF*MYLSFCGFITFSFRLKI*FYL 305
F+ Y++S+ESI Y SF G+++ +L + YL
Sbjct: 87 FWPYSLSLESISAFYCSFLGYVSCLSQLMVEGYL 120
>At1g21610.2 68414.m02703 wound-responsive family protein similar to
wound-responsive protein 14.05 (GI:16506638) [Castanea
sativa]; ESTs gb T42839 and gb|AA395192 come from this
gene
Length = 683
Score = 27.5 bits (58), Expect = 5.3
Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +2
Query: 299 EKQIKLNLKSERKCDETTKTQIHS-ENTLHGYCILKEKGTHITSNDMKHESRSFHEDTNF 475
+K KL++ + +K T + E+ L ++ T + +D+KH R+ H+ N
Sbjct: 196 DKHTKLSITARKKDQSTAPGSWKTQESPLPSGA--QDANTSVPLDDVKHSDRANHQSRND 253
Query: 476 TDHXTK 493
T H ++
Sbjct: 254 TSHKSR 259
>At1g21610.1 68414.m02702 wound-responsive family protein similar to
wound-responsive protein 14.05 (GI:16506638) [Castanea
sativa]; ESTs gb T42839 and gb|AA395192 come from this
gene
Length = 684
Score = 27.5 bits (58), Expect = 5.3
Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +2
Query: 299 EKQIKLNLKSERKCDETTKTQIHS-ENTLHGYCILKEKGTHITSNDMKHESRSFHEDTNF 475
+K KL++ + +K T + E+ L ++ T + +D+KH R+ H+ N
Sbjct: 196 DKHTKLSITARKKDQSTAPGSWKTQESPLPSGA--QDANTSVPLDDVKHSDRANHQSRND 253
Query: 476 TDHXTK 493
T H ++
Sbjct: 254 TSHKSR 259
>At3g22010.1 68416.m02777 receptor-like protein kinase-related
contains Pfam profile: PF01657 Domain of unknown
function that is usually associated with protein kinase
domain Pfam:PF00069; similar to receptor-like protein
kinase 5 (GI:13506747){Arabidopsis thaliana}
Length = 263
Score = 27.1 bits (57), Expect = 7.0
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +2
Query: 170 PTDEKSPTKNFKMDTLAFTEDNYLQDEILDDIKQGTIAPCSQPEKQI 310
P K+F +T+AF E L+ D+++ G +A S EK +
Sbjct: 155 PNKVMGDAKSFNKETMAFLEQLALEATRKDNMEDGMMALYSAREKMV 201
>At5g66470.1 68418.m08382 expressed protein
Length = 427
Score = 26.6 bits (56), Expect = 9.3
Identities = 25/108 (23%), Positives = 46/108 (42%), Gaps = 4/108 (3%)
Frame = +2
Query: 74 VCEWKNINDNKLIDSEMSKRRYQQRHNCITVIPTDEKSPTKNFKMDTLAFTEDNYLQDEI 253
V E N + ++ + + Q HN T E S +K + +F+E Q ++
Sbjct: 21 VVENPNFSPYRIYSRRRVTKSHLQAHNSTTSYGRTELSSSKKLWIRQRSFSEMEVEQAQL 80
Query: 254 LDDIKQGTIAPCSQPEKQIKLNLKSERK---CDETTKTQI-HSENTLH 385
DD +Q I + + L++K +R D+ ++ H+ NT H
Sbjct: 81 EDDEEQVEIDIVDE-ASLLSLSMKPDRNMALLDDYEMEELGHTPNTHH 127
>At3g23280.1 68416.m02934 zinc finger (C3HC4-type RING finger)
family protein / ankyrin repeat family protein contains
Pfam profile: PF00097 zinc finger, C3HC4 type (RING
finger) and Pfam profile: PF00023 ankyrin repeat
Length = 462
Score = 26.6 bits (56), Expect = 9.3
Identities = 7/22 (31%), Positives = 16/22 (72%)
Frame = +2
Query: 158 ITVIPTDEKSPTKNFKMDTLAF 223
+ ++PT ++PTK FK++ + +
Sbjct: 162 VVIVPTGSRNPTKPFKLELVVY 183
>At2g36010.2 68415.m04421 E2F transcription factor-3 (E2F3)
identical to E2F transcription factor-3 E2F3
[Arabidopsis thaliana] gi|10443853|gb|AAG17610
Length = 514
Score = 26.6 bits (56), Expect = 9.3
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +2
Query: 281 APCSQPEKQIKLNLKSERKCDETTKTQIHSENTLHGY 391
+PC P K ++N+KS+ K +++T S N + +
Sbjct: 172 SPCQTPRKGGRVNIKSKAKGNKSTPQTPISTNAVRSF 208
>At2g17430.1 68415.m02011 seven transmembrane MLO family protein /
MLO-like protein 7 (MLO7) identical to membrane protein
Mlo7 [Arabidopsis thaliana] gi|14091584|gb|AAK53800;
similar to MLO protein SWISS-PROT:P93766,
NCBI_gi:1877221 [Hordeum vulgare][Barley]
Length = 542
Score = 26.6 bits (56), Expect = 9.3
Identities = 14/45 (31%), Positives = 22/45 (48%)
Frame = -3
Query: 464 LHGMICFHVSYRWMLYECLFLLICSIHGEYFLNVFEFLWFHHIFF 330
+ GM S R+ ++C LL+ IH F N F+ F I++
Sbjct: 351 VQGMPLVQGSDRYFWFDCPQLLLHLIHFALFQNAFQITHFFWIWY 395
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,078,693
Number of Sequences: 28952
Number of extensions: 190354
Number of successful extensions: 544
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 535
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 544
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 878448512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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