Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_D11
(645 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_23683| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_32124| Best HMM Match : K-box (HMM E-Value=4.1) 33 0.20
SB_11244| Best HMM Match : M (HMM E-Value=2.5e-08) 33 0.20
SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10) 32 0.46
SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20) 31 0.61
SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13) 31 0.61
SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05) 31 0.80
SB_36254| Best HMM Match : Filament (HMM E-Value=0.21) 31 1.1
SB_28483| Best HMM Match : Filament (HMM E-Value=0.0082) 31 1.1
SB_35717| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.1
SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19) 31 1.1
SB_2494| Best HMM Match : M (HMM E-Value=0.0056) 30 1.4
SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31) 30 1.9
SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0) 30 1.9
SB_23024| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.9
SB_57710| Best HMM Match : bZIP_1 (HMM E-Value=0.32) 29 2.4
SB_35649| Best HMM Match : M (HMM E-Value=6e-09) 29 2.4
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_22350| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_17326| Best HMM Match : DUF1127 (HMM E-Value=0.71) 29 3.2
SB_48387| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.2
SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0) 29 3.2
SB_7565| Best HMM Match : Shugoshin_N (HMM E-Value=1.3) 29 4.3
SB_54524| Best HMM Match : Shugoshin_N (HMM E-Value=1.3) 29 4.3
SB_54477| Best HMM Match : Shugoshin_N (HMM E-Value=1.3) 29 4.3
SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.3
SB_48596| Best HMM Match : Filament (HMM E-Value=0.23) 28 5.7
SB_45474| Best HMM Match : PilO (HMM E-Value=1.9) 28 5.7
SB_43555| Best HMM Match : Shugoshin_N (HMM E-Value=2.7) 28 5.7
SB_38212| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_23221| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_2899| Best HMM Match : Spectrin (HMM E-Value=0.2) 28 5.7
SB_57099| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_56379| Best HMM Match : Shugoshin_N (HMM E-Value=2.7) 28 5.7
SB_56085| Best HMM Match : Shugoshin_N (HMM E-Value=2.7) 28 5.7
SB_54674| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_53647| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_50205| Best HMM Match : Shugoshin_N (HMM E-Value=2.7) 28 5.7
SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05) 28 5.7
SB_37800| Best HMM Match : Shugoshin_N (HMM E-Value=2.7) 28 5.7
SB_32928| Best HMM Match : PilO (HMM E-Value=1.9) 28 5.7
SB_20610| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.7
SB_11734| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.5
SB_38304| Best HMM Match : TPR_MLP1_2 (HMM E-Value=0.39) 28 7.5
SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_52732| Best HMM Match : M (HMM E-Value=0.019) 27 9.9
SB_17161| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.9
SB_9892| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0013) 27 9.9
SB_2574| Best HMM Match : DUF217 (HMM E-Value=0.066) 27 9.9
SB_16530| Best HMM Match : HALZ (HMM E-Value=6.5) 27 9.9
>SB_23683| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 412
Score = 44.0 bits (99), Expect = 1e-04
Identities = 20/52 (38%), Positives = 31/52 (59%)
Frame = +3
Query: 141 EEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKDV 296
E+YE L+ LD+LN+ LD LE ND ++ +++E L+ RQ E D+
Sbjct: 28 EDYEALDDKLDQLNTCLDKLENWNDSLNSRMREFLEDMQKSRQSQTGEANDL 79
>SB_32124| Best HMM Match : K-box (HMM E-Value=4.1)
Length = 207
Score = 33.1 bits (72), Expect = 0.20
Identities = 16/48 (33%), Positives = 30/48 (62%)
Frame = +3
Query: 135 ITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMR 278
+ EEYE + ++EL ++ L+ +NDD Q+ K L Q ++ R++M+
Sbjct: 129 LQEEYESQKIKIEELEVRIEDLKEENDDYQQETKYLKQV-LSYREDMK 175
>SB_11244| Best HMM Match : M (HMM E-Value=2.5e-08)
Length = 1381
Score = 33.1 bits (72), Expect = 0.20
Identities = 16/48 (33%), Positives = 30/48 (62%)
Frame = +3
Query: 135 ITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMR 278
+ EEYE + ++EL ++ L+ +NDD Q+ K L Q ++ R++M+
Sbjct: 866 LQEEYESQKIKIEELEVRIEDLKEENDDYQQETKYLKQV-LSYREDMK 912
>SB_48789| Best HMM Match : M (HMM E-Value=1.3e-10)
Length = 2478
Score = 31.9 bits (69), Expect = 0.46
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 4/63 (6%)
Frame = +3
Query: 123 NNEDITEEYELL----ESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENK 290
NN ++T E L E + EL L L ++ D+ H Q + + + +E+RE+ K
Sbjct: 1006 NNSNLTVENSKLKRESERQIKELQEILGTLRKELDEAHNQARSACANELVAMEELREQTK 1065
Query: 291 DVS 299
S
Sbjct: 1066 IAS 1068
>SB_54269| Best HMM Match : M (HMM E-Value=8.1e-20)
Length = 3489
Score = 31.5 bits (68), Expect = 0.61
Identities = 13/51 (25%), Positives = 28/51 (54%)
Frame = +3
Query: 153 LLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKDVSNS 305
LLES L E +D LERK+ ++ ++L + + + + E ++++ +
Sbjct: 2159 LLESALGEYQDHIDMLERKSKELEEELNTKSEKEVEMLSRVNELQEELAKA 2209
>SB_43903| Best HMM Match : FHA (HMM E-Value=4.6e-13)
Length = 553
Score = 31.5 bits (68), Expect = 0.61
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Frame = +3
Query: 129 EDITEEYELLESTLD-ELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREE 284
E + EE + ES ++ EL LE + +D+ + LKELL+ + ++EM E
Sbjct: 189 EKVLEELKRKESVMESELLRQKASLENEKEDLERSLKELLEKSPKEKEEMLSE 241
>SB_30415| Best HMM Match : M (HMM E-Value=6.5e-05)
Length = 1312
Score = 31.1 bits (67), Expect = 0.80
Identities = 18/68 (26%), Positives = 32/68 (47%)
Frame = +3
Query: 129 EDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKDVSNSN 308
+D+ L +D L ++L+ ++RKN ++ LL+ I REE + S+
Sbjct: 220 DDLISTQRSLTRDVDHLTTSLEEVQRKNRKYADEVDRLLKKIQNIEDSFREEKAVLIKSH 279
Query: 309 *RNANTAL 332
+ NT L
Sbjct: 280 ESDKNTVL 287
>SB_36254| Best HMM Match : Filament (HMM E-Value=0.21)
Length = 589
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/74 (27%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Frame = +3
Query: 120 DNNEDITEEYELLE---STLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEM---RE 281
+N+++ E Y+L S D L + L+ K+DD+ ++ + L + A+++E+ RE
Sbjct: 269 ENDKNKVENYKLKTAKFSAEDSLREEVGSLKSKSDDLEKEREMLQREKNALQRELRNVRE 328
Query: 282 ENKDVSNSN*RNAN 323
+ DV N + +++N
Sbjct: 329 KLMDVENVHKQSSN 342
>SB_28483| Best HMM Match : Filament (HMM E-Value=0.0082)
Length = 478
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +3
Query: 105 EPPEDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAI 263
E E D I + E +S DEL S L+ KND+I Q K+ +++ + +
Sbjct: 323 EETEQDIENRIQDAIEKYKSLPDELASMKAVLDMKNDEIKQLRKDRMEAKMEL 375
>SB_35717| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 161
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/72 (26%), Positives = 34/72 (47%)
Frame = -2
Query: 398 FYTFETNKLH*VTCIFAQLNLK*CCICISSITVADVLIFFTHFLSNCNIGLQKLFQLLVN 219
++ NK H V + QLN I + ++T+ +L F T + +C + L L++
Sbjct: 74 YFVARENKYHSVQPLSCQLNQCKLLIAVRTVTLYGLLPFCTSTIVDCRENINSLLATLLD 133
Query: 218 IIIFTLQEIQCR 183
I T +QC+
Sbjct: 134 ITRTT--TVQCQ 143
>SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19)
Length = 3107
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/74 (27%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Frame = +3
Query: 120 DNNEDITEEYELLE---STLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEM---RE 281
+N+++ E Y+L S D L + L+ K+DD+ ++ + L + A+++E+ RE
Sbjct: 2797 ENDKNKVENYKLKTAKFSAEDSLREEVGSLKSKSDDLEKEREMLQREKNALQRELRNVRE 2856
Query: 282 ENKDVSNSN*RNAN 323
+ DV N + +++N
Sbjct: 2857 KLMDVENVHKQSSN 2870
>SB_2494| Best HMM Match : M (HMM E-Value=0.0056)
Length = 737
Score = 30.3 bits (65), Expect = 1.4
Identities = 13/53 (24%), Positives = 26/53 (49%)
Frame = +3
Query: 117 DDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEM 275
DDNN D+ +E L+ + +L + R+ + +L E N +++E+
Sbjct: 328 DDNNNDLDQELSALKGQMWKLEGQAESYSRQKSQLKIELDEERAKNAGLKKEL 380
>SB_59515| Best HMM Match : Pox_A_type_inc (HMM E-Value=3.2e-31)
Length = 2122
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/60 (30%), Positives = 32/60 (53%), Gaps = 7/60 (11%)
Frame = +3
Query: 129 EDITEEYELLESTLDELNSALDFLE-------RKNDDIHQQLKELLQSNIAIRQEMREEN 287
ED+ E LE LD L L+F + ++ND + +++ EL + NI+ + ++ E N
Sbjct: 1832 EDLRAEKTSLEIELDNLKKDLEFAKQTGVEYTKENDTLQKEIIELREENISQKSKLYEIN 1891
Score = 27.9 bits (59), Expect = 7.5
Identities = 16/62 (25%), Positives = 31/62 (50%)
Frame = +3
Query: 111 PEDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENK 290
P + E EYELL+ +++L S L E + D+ ++ K L + +++ E+
Sbjct: 1141 PLMEKYESTMREYELLKDEVEQLRSKLSTTELQLDEEIRKRKALQKERDDKAEDLYEKEN 1200
Query: 291 DV 296
+V
Sbjct: 1201 EV 1202
Score = 27.5 bits (58), Expect = 9.9
Identities = 18/71 (25%), Positives = 32/71 (45%)
Frame = +3
Query: 120 DNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKDVS 299
D E + + E LDE L+++ DD + L E + +++ ++E +S
Sbjct: 1158 DEVEQLRSKLSTTELQLDEEIRKRKALQKERDDKAEDLYEKENEVVVMKKRVKEFELLIS 1217
Query: 300 NSN*RNANTAL 332
NSN A +L
Sbjct: 1218 NSNDSAAKDSL 1228
>SB_23775| Best HMM Match : Tropomyosin (HMM E-Value=0)
Length = 442
Score = 29.9 bits (64), Expect = 1.9
Identities = 14/53 (26%), Positives = 27/53 (50%)
Frame = +3
Query: 120 DNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMR 278
+ E+ ++YE + L EL + L+ E+K D ++KEL + + +R
Sbjct: 111 ERTEEAEKQYEEISERLQELENELEEAEQKADAAEARVKELEEEVTLVGNNLR 163
>SB_23024| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 593
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/69 (24%), Positives = 32/69 (46%)
Frame = +3
Query: 117 DDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKDV 296
DD+ + +L S ++ L + L+F + K D + LK Q ++ QE++ N+ +
Sbjct: 296 DDDVVVVVVVVAILRSEVETLRAELEFNQHKTDQYEELLKSERQRIRSLEQELQSTNEKL 355
Query: 297 SNSN*RNAN 323
N N
Sbjct: 356 HFQTETNMN 364
>SB_57710| Best HMM Match : bZIP_1 (HMM E-Value=0.32)
Length = 584
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/56 (25%), Positives = 29/56 (51%)
Frame = +3
Query: 126 NEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKD 293
N+ +T+E E ++ L D R+ ++ + LKE + N +++E+ E +D
Sbjct: 11 NKSLTDEIEAVQLQLQMACERRDQYNRQLNEALESLKEQRERNTVLQKELTERKQD 66
>SB_35649| Best HMM Match : M (HMM E-Value=6e-09)
Length = 1279
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/67 (22%), Positives = 33/67 (49%)
Frame = +3
Query: 126 NEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKDVSNS 305
N + EE+ L+ T D LNS+ + + + D+ ++L+E + ++ ++ E + +
Sbjct: 573 NASLHEEFSQLKETCDTLNSSFEEKDHELVDLTERLREKTREVESLTTQLEEAKSALQSK 632
Query: 306 N*RNANT 326
NT
Sbjct: 633 KQELENT 639
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
Frame = +3
Query: 156 LESTLDELNSALDFLERKNDDIHQQLKELL----QSNIAIRQEMREENK 290
L+ T+DEL++++ + K I +QLK+ L + A+++E+ E+ K
Sbjct: 846 LKKTVDELSNSITLRDEKITKIKEQLKQTLEKFKEKEKALKEEIAEKEK 894
>SB_22350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1967
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/64 (20%), Positives = 33/64 (51%)
Frame = +3
Query: 114 EDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKD 293
+DD E I + E ELN L+ ++++ + + +++EL Q + + + ++ K+
Sbjct: 1289 KDDALEKIKASLKEAEERFQELNRTLEEVQKEKNALESKIEELTQKSETLMGKHSDKEKE 1348
Query: 294 VSNS 305
+ +
Sbjct: 1349 LEKA 1352
>SB_17326| Best HMM Match : DUF1127 (HMM E-Value=0.71)
Length = 333
Score = 29.1 bits (62), Expect = 3.2
Identities = 14/65 (21%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Frame = +3
Query: 111 PEDDNNEDITEEYE-LLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREEN 287
P+ ++ EE E +L+ TL + L + +HQ+ + L + N+A+++ R ++
Sbjct: 235 PKGTRKSNVREEMERVLQYTLLRGEHQIKNLTAEAQTLHQEAQRLREENVALKKLQRLQD 294
Query: 288 KDVSN 302
+++++
Sbjct: 295 RELND 299
>SB_48387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 941
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/63 (30%), Positives = 34/63 (53%)
Frame = +3
Query: 138 TEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKDVSNSN*RN 317
TE L++ LD+ + LER+N + Q+LK Q++IA +Q+ + + +S
Sbjct: 743 TESEAKLKAQLDQQLRKIHDLERENSRVSQELKN-AQAHIAQKQKELQTCERISELEENK 801
Query: 318 ANT 326
A+T
Sbjct: 802 ADT 804
>SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0)
Length = 1997
Score = 29.1 bits (62), Expect = 3.2
Identities = 16/59 (27%), Positives = 34/59 (57%)
Frame = +3
Query: 114 EDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENK 290
E + +T+ LESTLDE+N L+ ++ ++ +++K L+ ++ + Q+ EE +
Sbjct: 1004 EQNKVSHLTKTKLKLESTLDEVNLNLEREKKVRGEV-EKVKRKLEGDLKMTQQTLEETQ 1061
>SB_7565| Best HMM Match : Shugoshin_N (HMM E-Value=1.3)
Length = 267
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +3
Query: 150 ELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKDVS 299
ELL+ L L ++LDFL K D I LK++ + +++ +E ++ +S
Sbjct: 10 ELLDKKLAPLQASLDFLNEKYDII---LKKVSDQEVKVKELSKENSRLLS 56
>SB_54524| Best HMM Match : Shugoshin_N (HMM E-Value=1.3)
Length = 259
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +3
Query: 150 ELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKDVS 299
ELL+ L L ++LDFL K D I LK++ + +++ +E ++ +S
Sbjct: 10 ELLDKKLAPLQASLDFLNEKYDII---LKKVSDQEVKVKELSKENSRLLS 56
>SB_54477| Best HMM Match : Shugoshin_N (HMM E-Value=1.3)
Length = 267
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +3
Query: 150 ELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKDVS 299
ELL+ L L ++LDFL K D I LK++ + +++ +E ++ +S
Sbjct: 10 ELLDKKLAPLQASLDFLNEKYDII---LKKVSDQEVKVKELSKENSRLLS 56
>SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3934
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/54 (29%), Positives = 31/54 (57%)
Frame = +3
Query: 171 DELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKDVSNSN*RNANTAL 332
D L + ++++D+I +++KE L+S ++ QE +EE + + N N T L
Sbjct: 2658 DHLTNFKQSCQKQSDEI-RRIKEDLKSKESLLQETKEELEALKEENSENKETIL 2710
Score = 27.9 bits (59), Expect = 7.5
Identities = 13/52 (25%), Positives = 28/52 (53%)
Frame = +3
Query: 168 LDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKDVSNSN*RNAN 323
L++++ L L K DD+ ++ +E+ R+E+R+E ++ N+ N
Sbjct: 2810 LEKMDDNLTELRLKYDDLVKEREEVKSDLATTREELRQEQIELKNARKEGEN 2861
>SB_20424| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1711
Score = 28.7 bits (61), Expect = 4.3
Identities = 13/45 (28%), Positives = 25/45 (55%)
Frame = +3
Query: 141 EEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEM 275
EE+ + LN L+ L+ KN +H+QL+E+ + ++E+
Sbjct: 678 EEFRQDRDLISGLNMQLENLKNKNKMLHEQLEEVSNEVVQGKEEL 722
>SB_48596| Best HMM Match : Filament (HMM E-Value=0.23)
Length = 458
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/62 (29%), Positives = 34/62 (54%)
Frame = +3
Query: 117 DDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKDV 296
D+N IT EYE + + +E+++ ER+ +I ++LKE L+ + E + KD
Sbjct: 231 DENRSSITNEYEDMRARFNEVDT-----ERQ--EIRRELKEALRQIKMLSGECLQGKKDA 283
Query: 297 SN 302
++
Sbjct: 284 TD 285
>SB_45474| Best HMM Match : PilO (HMM E-Value=1.9)
Length = 228
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +3
Query: 150 ELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENK 290
ELL+ L L ++LDFL K D I LK++ + +++ +E ++
Sbjct: 10 ELLDKKLAPLQASLDFLNEKYDII---LKKVSDQEVKVKELSKENSR 53
>SB_43555| Best HMM Match : Shugoshin_N (HMM E-Value=2.7)
Length = 99
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +3
Query: 150 ELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENK 290
ELL+ L L ++LDFL K D I LK++ + +++ +E ++
Sbjct: 10 ELLDKKLAPLQASLDFLNEKYDII---LKKVSDQEVKVKELSKENSR 53
>SB_38212| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1892
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/63 (23%), Positives = 35/63 (55%)
Frame = +3
Query: 105 EPPEDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREE 284
EP D ++++ L++ DELN+ + + +++ +LKE LQ+ ++I + ++
Sbjct: 118 EPTIDRLKRELSDSDNNLQAVQDELNAKFQEYKDRENELKVKLKE-LQAKLSICAKRDQK 176
Query: 285 NKD 293
N +
Sbjct: 177 NAE 179
>SB_23221| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 109
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +3
Query: 150 ELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENK 290
ELL+ L L ++LDFL K D I LK++ + +++ +E ++
Sbjct: 10 ELLDKKLAPLQASLDFLNEKYDII---LKKVSDQEVKVKELSKENSR 53
>SB_2899| Best HMM Match : Spectrin (HMM E-Value=0.2)
Length = 139
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +3
Query: 132 DITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREEN 287
D+ + + LES LD+L + DD+ + L Q A+R ++ + N
Sbjct: 62 DVYKGLKRLESDLDQLTYQMTTARESGDDMIRHLHSTHQDTTAVRDKLDDVN 113
>SB_57099| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2509
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +3
Query: 132 DITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREEN 287
D+ + + LES LD+L + DD+ + L Q A+R ++ + N
Sbjct: 2381 DVYKGLKRLESDLDQLTYQMTTARESGDDMIRHLHSTHQDTTAVRDKLDDVN 2432
>SB_56379| Best HMM Match : Shugoshin_N (HMM E-Value=2.7)
Length = 109
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +3
Query: 150 ELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENK 290
ELL+ L L ++LDFL K D I LK++ + +++ +E ++
Sbjct: 10 ELLDKKLAPLQASLDFLNEKYDII---LKKVSDQEVKVKELSKENSR 53
>SB_56085| Best HMM Match : Shugoshin_N (HMM E-Value=2.7)
Length = 116
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +3
Query: 150 ELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENK 290
ELL+ L L ++LDFL K D I LK++ + +++ +E ++
Sbjct: 10 ELLDKKLAPLQASLDFLNEKYDII---LKKVSDQEVKVKELSKENSR 53
>SB_54674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 28.3 bits (60), Expect = 5.7
Identities = 12/34 (35%), Positives = 18/34 (52%)
Frame = +3
Query: 201 ERKNDDIHQQLKELLQSNIAIRQEMREENKDVSN 302
ER D QQL +L Q ++ +REE ++ N
Sbjct: 505 ERMRQDYEQQLSDLKQEVFSLTARLREEEQNADN 538
>SB_53647| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +3
Query: 150 ELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENK 290
ELL+ L L ++LDFL K D I LK++ + +++ +E ++
Sbjct: 10 ELLDKKLAPLQASLDFLNEKYDII---LKKVSDQEVKVKELSKENSR 53
>SB_50205| Best HMM Match : Shugoshin_N (HMM E-Value=2.7)
Length = 91
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +3
Query: 150 ELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENK 290
ELL+ L L ++LDFL K D I LK++ + +++ +E ++
Sbjct: 10 ELLDKKLAPLQASLDFLNEKYDII---LKKVSDQEVKVKELSKENSR 53
>SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05)
Length = 3397
Score = 28.3 bits (60), Expect = 5.7
Identities = 14/52 (26%), Positives = 25/52 (48%)
Frame = +3
Query: 132 DITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREEN 287
D+ + + LES LD+L + DD+ + L Q A+R ++ + N
Sbjct: 89 DVYKGLKRLESDLDQLTYQMTTARESGDDMIRHLHSTHQDTTAVRDKLDDVN 140
>SB_37800| Best HMM Match : Shugoshin_N (HMM E-Value=2.7)
Length = 109
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +3
Query: 150 ELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENK 290
ELL+ L L ++LDFL K D I LK++ + +++ +E ++
Sbjct: 10 ELLDKKLAPLQASLDFLNEKYDII---LKKVSDQEVKVKELSKENSR 53
>SB_32928| Best HMM Match : PilO (HMM E-Value=1.9)
Length = 228
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +3
Query: 150 ELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENK 290
ELL+ L L ++LDFL K D I LK++ + +++ +E ++
Sbjct: 10 ELLDKKLAPLQASLDFLNEKYDII---LKKVSDQEVKVKELSKENSR 53
>SB_20610| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 28.3 bits (60), Expect = 5.7
Identities = 15/47 (31%), Positives = 27/47 (57%)
Frame = +3
Query: 150 ELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENK 290
ELL+ L L ++LDFL K D I LK++ + +++ +E ++
Sbjct: 10 ELLDKKLAPLQASLDFLNEKYDII---LKKVSDQEVKVKELSKENSR 53
>SB_11734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 445
Score = 27.9 bits (59), Expect = 7.5
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = -3
Query: 616 FFFCEQCSTKCYFSFL 569
F F C+TKC+FSFL
Sbjct: 144 FVFLLSCATKCFFSFL 159
>SB_38304| Best HMM Match : TPR_MLP1_2 (HMM E-Value=0.39)
Length = 704
Score = 27.9 bits (59), Expect = 7.5
Identities = 15/43 (34%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Frame = +3
Query: 180 NSALDFLERKNDDIHQQLKELLQSNIAIRQEMREE-NKDVSNS 305
NSAL L + + QL++ +Q+N A+R ++ E+ N+ +S+S
Sbjct: 479 NSALAMLLAEVRSLRVQLEKSIQTNNALRLKLEEQLNRPISHS 521
>SB_53556| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1524
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/41 (29%), Positives = 23/41 (56%)
Frame = +3
Query: 120 DNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKEL 242
DN +++ +E E L+ DE+ LE++ +I +L +L
Sbjct: 193 DNEQNLLKEIESLKLKYDEIEKEKGVLEKEKIEIFDELNKL 233
>SB_52732| Best HMM Match : M (HMM E-Value=0.019)
Length = 1366
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/56 (25%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Frame = +3
Query: 132 DITEEYELLEST---LDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENK 290
++T++ + E+T LDE+N++L + ++ +L+E L + +E++ EN+
Sbjct: 1085 ELTDKLAVAENTAKDLDEVNASLQARLSELQAVNNELEEKLMDLSRVGEELKSENE 1140
>SB_17161| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 682
Score = 27.5 bits (58), Expect = 9.9
Identities = 14/60 (23%), Positives = 35/60 (58%)
Frame = +3
Query: 129 EDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKDVSNSN 308
+++ E +L+E ++E +S + E + Q+++ L +N ++RQ++R ++ N+N
Sbjct: 91 KEVVEIKDLVEERVEETSSIAERDELVTA-LKQEVQRLKGNNDSLRQQIRHLKRETCNAN 149
>SB_9892| Best HMM Match : Pox_A_type_inc (HMM E-Value=0.0013)
Length = 663
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/60 (26%), Positives = 27/60 (45%)
Frame = +3
Query: 129 EDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKDVSNSN 308
E+ T+ E L L+E L +RKN + L LQ + ++M +++ N N
Sbjct: 323 EEKTKTVEHLTLALEEAKDELQVAKRKNASTIKDLTRQLQQSRRQVEKMESNQENLQNGN 382
>SB_2574| Best HMM Match : DUF217 (HMM E-Value=0.066)
Length = 225
Score = 27.5 bits (58), Expect = 9.9
Identities = 11/42 (26%), Positives = 24/42 (57%)
Frame = +3
Query: 132 DITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNI 257
D ++ + L L L+ +D L+++N+D+ QLK + ++
Sbjct: 76 DSDQDDQYLPDRLSSLSVQVDNLKKENEDVRAQLKSRVNGDV 117
>SB_16530| Best HMM Match : HALZ (HMM E-Value=6.5)
Length = 75
Score = 27.5 bits (58), Expect = 9.9
Identities = 12/54 (22%), Positives = 35/54 (64%)
Frame = +3
Query: 192 DFLERKNDDIHQQLKELLQSNIAIRQEMREENKDVSNSN*RNANTALF*I*LCK 353
D L ++++++ ++LK L++ + A+R++M +++ ++ + + NT+ + CK
Sbjct: 3 DRLRKEHEELKKELKMLIKEHEALREKMVDKSFAPTHDDVQTLNTSCDGLVACK 56
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,062,543
Number of Sequences: 59808
Number of extensions: 269786
Number of successful extensions: 951
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 948
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1633044375
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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