Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_D11
(645 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g65930.2 68418.m08300 kinesin-like calmodulin-binding protein... 32 0.37
At5g65930.1 68418.m08299 kinesin-like calmodulin-binding protein... 32 0.37
At5g45310.1 68418.m05562 expressed protein 31 0.50
At5g65310.1 68418.m08216 homeobox-leucine zipper protein 5 (HB-5... 31 0.65
At2g42480.1 68415.m05255 meprin and TRAF homology domain-contain... 30 1.1
At1g74490.1 68414.m08629 protein kinase, putative similar to pro... 30 1.1
At5g39750.1 68418.m04815 MADS-box family protein contains Pfam p... 30 1.5
At1g55255.1 68414.m06311 zinc finger (C3HC4-type RING finger) fa... 30 1.5
At3g01470.1 68416.m00071 homeobox-leucine zipper protein 5 (HAT5... 29 2.0
At1g66810.1 68414.m07594 zinc finger (CCCH-type) family protein ... 29 2.0
At1g09660.1 68414.m01084 KH domain-containing quaking protein, p... 29 2.0
At1g01780.1 68414.m00097 LIM domain-containing protein similar t... 29 2.0
At2g45800.1 68415.m05696 LIM domain-containing protein similar t... 29 3.5
At4g31340.1 68417.m04445 myosin heavy chain-related contains wea... 28 4.6
At1g30810.1 68414.m03767 transcription factor jumonji (jmj) fami... 28 4.6
At5g39810.1 68418.m04822 MADS-box family protein contains simila... 28 6.1
At4g32190.1 68417.m04581 centromeric protein-related low similar... 28 6.1
At3g18480.1 68416.m02348 CCAAT displacement protein-related / CD... 28 6.1
At3g12020.1 68416.m01490 kinesin motor protein-related similar t... 27 8.1
At2g07340.2 68415.m00842 prefoldin-related KE2 family protein co... 27 8.1
At2g07340.1 68415.m00841 prefoldin-related KE2 family protein co... 27 8.1
>At5g65930.2 68418.m08300 kinesin-like calmodulin-binding protein
(ZWICHEL) identical to kinesin-like protein GI:2224925
from [Arabidopsis thaliana]
Length = 1260
Score = 31.9 bits (69), Expect = 0.37
Identities = 20/62 (32%), Positives = 33/62 (53%)
Frame = +3
Query: 135 ITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKDVSNSN*R 314
++E LE +L+SA +E KN D+ LLQ+N+ +E+RE +D+ N +
Sbjct: 795 VSELENKLEVLAQDLDSAESTIESKNSDML-----LLQNNLKELEELREMKEDIDRKNEQ 849
Query: 315 NA 320
A
Sbjct: 850 TA 851
>At5g65930.1 68418.m08299 kinesin-like calmodulin-binding protein
(ZWICHEL) identical to kinesin-like protein GI:2224925
from [Arabidopsis thaliana]
Length = 1259
Score = 31.9 bits (69), Expect = 0.37
Identities = 20/62 (32%), Positives = 33/62 (53%)
Frame = +3
Query: 135 ITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKDVSNSN*R 314
++E LE +L+SA +E KN D+ LLQ+N+ +E+RE +D+ N +
Sbjct: 794 VSELENKLEVLAQDLDSAESTIESKNSDML-----LLQNNLKELEELREMKEDIDRKNEQ 848
Query: 315 NA 320
A
Sbjct: 849 TA 850
>At5g45310.1 68418.m05562 expressed protein
Length = 352
Score = 31.5 bits (68), Expect = 0.50
Identities = 14/51 (27%), Positives = 27/51 (52%)
Frame = +3
Query: 117 DDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQ 269
+ N + +EY ++E LDEL D K + + +L+EL + N+ + +
Sbjct: 111 EKNLREAIKEYRIMEQDLDELEDEHDEAISKIEKLEAELQELKEENLQLME 161
>At5g65310.1 68418.m08216 homeobox-leucine zipper protein 5 (HB-5) /
HD-ZIP transcription factor 5 identical to
homeobox-leucine zipper protein ATHB-5 (HD-ZIP protein
ATHB-5) (SP:P46667) [Arabidopsis thaliana]
Length = 312
Score = 31.1 bits (67), Expect = 0.65
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 129 EDITEEYELLESTLDELNSALDFLERKNDDIHQQLKEL 242
+ + +Y +L+S D L D L+R ND + Q+KEL
Sbjct: 127 KQLERDYGVLKSNFDALKRNRDSLQRDNDSLLGQIKEL 164
>At2g42480.1 68415.m05255 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein similar to
ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 743
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/60 (31%), Positives = 33/60 (55%)
Frame = +3
Query: 117 DDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKDV 296
D+ +DI E + LE E +S LD L+ K D+I + K+ ++ + Q++ E KD+
Sbjct: 257 DEWEQDIEERLKNLEGM--EFDSKLDSLKSKLDEISLERKKSYDADGSRVQQLEERVKDI 314
>At1g74490.1 68414.m08629 protein kinase, putative similar to
protein kinase [Arabidopsis thaliana]
gi|2852449|dbj|BAA24695; contains Pfam profile: PF00069
Eukaryotic protein kinase domain
Length = 399
Score = 30.3 bits (65), Expect = 1.1
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +1
Query: 490 HLQYLSMNNYLACLHHLNVISCIFMSVGMKNNI*LSIVHRKKNGSIKHNI 639
H ++L NYL LHH N++ I S ++N L + NGS+++++
Sbjct: 133 HKEWLREVNYLGRLHHPNLVKLIGYS--LENEHRLLVYEHLPNGSLENHL 180
>At5g39750.1 68418.m04815 MADS-box family protein contains Pfam
profile PF00319: SRF-type transcription factor
(DNA-binding and dimerisation domain); MADS-box protein
AGL81
Length = 355
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/62 (29%), Positives = 27/62 (43%), Gaps = 2/62 (3%)
Frame = +3
Query: 108 PPEDDNNEDITEEYELLESTLDELNSA--LDFLERKNDDIHQQLKELLQSNIAIRQEMRE 281
PPE + EDI Y L L S DFL +K D + + K + N ++ ++
Sbjct: 65 PPEREKVEDIALRYSQLNEALRRKKSVTLYDFLNKKKDKTNLEKKAKITDNDDLKTCLKN 124
Query: 282 EN 287
N
Sbjct: 125 VN 126
>At1g55255.1 68414.m06311 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 zinc
finger, C3HC4 type (RING finger)
Length = 383
Score = 29.9 bits (64), Expect = 1.5
Identities = 14/67 (20%), Positives = 31/67 (46%)
Frame = +3
Query: 132 DITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREENKDVSNSN* 311
D +E+ L+S + + + R+ DDI +L + + + +E+ E NK++
Sbjct: 249 DADKEFRWLKSAVSSSEKEYEQISRRTDDIKLELDDERREKKKLEEELMELNKELEELGS 308
Query: 312 RNANTAL 332
+ A+
Sbjct: 309 ESVEAAI 315
>At3g01470.1 68416.m00071 homeobox-leucine zipper protein 5 (HAT5) /
HD-ZIP protein 5 / HD-ZIP protein (HB-1) identical to
homeobox-leucine zipper protein HAT5 (HD-ZIP protein 5)
(HD-ZIP protein ATHB-1) GB:Q02283 [Arabidopsis thaliana]
Length = 272
Score = 29.5 bits (63), Expect = 2.0
Identities = 15/52 (28%), Positives = 28/52 (53%)
Frame = +3
Query: 129 EDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEMREE 284
+ + +Y+LL+ST D+L S D + ND + ++ L + + +QE E
Sbjct: 123 KQLERDYDLLKSTYDQLLSNYDSIVMDNDKLRSEVTSLTE-KLQGKQETANE 173
>At1g66810.1 68414.m07594 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 310
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/40 (32%), Positives = 23/40 (57%)
Frame = +3
Query: 129 EDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQ 248
+++ E YEL + L L + LD L +ND + + +LL+
Sbjct: 90 DELNEHYELCLNRLQSLMTELDSLRHENDSLRFENSDLLK 129
>At1g09660.1 68414.m01084 KH domain-containing quaking protein,
putative similar to GB:AAC67357
Length = 298
Score = 29.5 bits (63), Expect = 2.0
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = +3
Query: 105 EPPEDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQE 272
E PED N + LES L ++ ++D +R +QLKEL N +R+E
Sbjct: 223 ELPEDIINSRLEHAVHFLESLLKPMDESMDHYKR------EQLKELAALNGTLREE 272
>At1g01780.1 68414.m00097 LIM domain-containing protein similar to
PGPS/D1 [Petunia x hybrida] GI:4105772, LIM domain
protein PLIM1 [Nicotiana tabacum] GI:5932418; contains
Pfam profile PF00412: LIM domain
Length = 205
Score = 29.5 bits (63), Expect = 2.0
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 478 CIIIHLQYLSMNNYLACLHHLNVISCIFMSVGMKNNI*LSIVHRK 612
C + H Y S+++ L C HH N +FM G ++ + HR+
Sbjct: 136 CTLTHSSYASLDSVLYCRHHFNQ---LFMEKGNYAHVLQAANHRR 177
>At2g45800.1 68415.m05696 LIM domain-containing protein similar to
PGPS/D1 [Petunia x hybrida] GI:4105772, LIM domain
protein PLIM1 [Nicotiana tabacum] GI:5932418; contains
Pfam profile PF00412: LIM domain
Length = 226
Score = 28.7 bits (61), Expect = 3.5
Identities = 16/63 (25%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = +1
Query: 442 DQYHKVSV--SFK*CIIIHLQYLSMNNYLACLHHLNVISCIFMSVGMKNNI*LSIVHRKK 615
+ YHK + C + H Y S+N L C H N +F+ G N++ + + ++
Sbjct: 124 ESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQ---LFLEKGSYNHVHQAAANHRR 180
Query: 616 NGS 624
+ S
Sbjct: 181 SAS 183
>At4g31340.1 68417.m04445 myosin heavy chain-related contains weak
similarity to Myosin heavy chain, nonmuscle type A
(Cellular myosin heavy chain, type A) (Nonmuscle myosin
heavy chain-A) (NMMHC-A) (Swiss-Prot:P35579) [Homo
sapiens]
Length = 437
Score = 28.3 bits (60), Expect = 4.6
Identities = 18/54 (33%), Positives = 30/54 (55%)
Frame = +3
Query: 114 EDDNNEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEM 275
E D+ E T E E L ELNS+LD L++ N++ ++ +L ++ +EM
Sbjct: 134 EKDSTEARTNE---AEKKLRELNSSLDKLQKTNEEQKNKIGKLERAIKIAEEEM 184
>At1g30810.1 68414.m03767 transcription factor jumonji (jmj) family
protein / zinc finger (C5HC2 type) family protein
contains similarity to Swiss-Prot:P29375
retinoblastoma-binding protein 2 (RBBP-2) [Homo
sapiens]; contains Pfam domains PF02375: jmjN domain and
PF02373: jmjC domain; intron between exons 6 and 7 was
required to circumvent a frameshift. There could be an
underlying sequence error.
Length = 787
Score = 28.3 bits (60), Expect = 4.6
Identities = 12/30 (40%), Positives = 21/30 (70%)
Frame = +3
Query: 132 DITEEYELLESTLDELNSALDFLERKNDDI 221
D+ + + LL T+DEL+S + LE ++DD+
Sbjct: 521 DVKDGFILLRYTMDELSSLVRALEGESDDL 550
>At5g39810.1 68418.m04822 MADS-box family protein contains
similarity to hypothetical proteins of [Arabidopsis
thaliana]
Length = 329
Score = 27.9 bits (59), Expect = 6.1
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +3
Query: 108 PPEDDNNEDITEEYELLESTLDELNSA--LDFLERKNDDIHQQLKELLQSN 254
PPE + EDI Y L L S DFL +K + + + K ++ N
Sbjct: 65 PPEREKVEDIALRYSQLNEALRRKKSVTLYDFLNKKKNKTNLEKKAKIKDN 115
>At4g32190.1 68417.m04581 centromeric protein-related low similarity
to SP|Q02224 Centromeric protein E (CENP-E protein)
{Homo sapiens}
Length = 783
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +3
Query: 126 NEDITEEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQ 269
N+++TE L+ S D+L A + L+ K+ +H+ EL S + + +
Sbjct: 503 NQEVTELKALMISREDQLMEATEMLKEKDVHLHRIEGELGSSKLKVTE 550
>At3g18480.1 68416.m02348 CCAAT displacement protein-related /
CDP-related similar to CCAAT displacement protein (CDP)
(Cut-like 1) (Swiss-Prot:P39880) [Homo sapiens];
contains Pfam:PF00904 Involucrin repeat
Length = 689
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/51 (27%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +3
Query: 141 EEYELLESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQ-EMREENK 290
EE+ + L + + LE +N + QQ++E ++ + I+Q + EEN+
Sbjct: 152 EEFRTEATHLKNQQATIRRLEERNRQLEQQMEEKIKEVVEIKQRNLAEENQ 202
>At3g12020.1 68416.m01490 kinesin motor protein-related similar to
putative kinesin heavy chain GB:AAD23684 GI:4567271 from
[Arabidopsis thaliana]
Length = 1030
Score = 27.5 bits (58), Expect = 8.1
Identities = 17/67 (25%), Positives = 34/67 (50%), Gaps = 6/67 (8%)
Frame = +3
Query: 105 EPPEDDNNEDITEEYELLESTLDELNSALDFLERKNDDI----HQQL--KELLQSNIAIR 266
E + NE+I EE ++L + N + LER+ D H+ L +++Q+ +R
Sbjct: 662 EAAKSPQNEEINEEIKVLNDDIKAKNDQIATLERQIMDFVMTSHEALDKSDIMQAVAELR 721
Query: 267 QEMREEN 287
++ E++
Sbjct: 722 DQLNEKS 728
>At2g07340.2 68415.m00842 prefoldin-related KE2 family protein
contains similarity to Swiss-Prot:O60925 prefoldin
subunit 1 [Homo sapiens]; contains Pfam domain, PF01920:
KE2 family protein
Length = 127
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/39 (28%), Positives = 24/39 (61%)
Frame = +3
Query: 159 ESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEM 275
E+ + L ++ ++LE++ ++ L+ELLQ I Q++
Sbjct: 84 EAAVASLQTSKEYLEKQVAEVENNLRELLQQEPGIAQQI 122
>At2g07340.1 68415.m00841 prefoldin-related KE2 family protein
contains similarity to Swiss-Prot:O60925 prefoldin
subunit 1 [Homo sapiens]; contains Pfam domain, PF01920:
KE2 family protein
Length = 128
Score = 27.5 bits (58), Expect = 8.1
Identities = 11/39 (28%), Positives = 24/39 (61%)
Frame = +3
Query: 159 ESTLDELNSALDFLERKNDDIHQQLKELLQSNIAIRQEM 275
E+ + L ++ ++LE++ ++ L+ELLQ I Q++
Sbjct: 85 EAAVASLQTSKEYLEKQVAEVENNLRELLQQEPGIAQQI 123
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,579,464
Number of Sequences: 28952
Number of extensions: 181293
Number of successful extensions: 656
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 638
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 655
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1334473344
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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