BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= fprWP01_F_D10 (595 letters) Database: arabidopsis 28,952 sequences; 12,070,560 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value At1g23410.1 68414.m02932 ubiquitin extension protein, putative /... 208 2e-54 At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / ... 206 6e-54 At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / ... 206 9e-54 At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677 137 5e-33 At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to GI:92... 137 5e-33 At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to GI:92... 137 5e-33 At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3) senescence... 137 5e-33 At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3) senescence... 137 5e-33 At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3) senescence... 137 5e-33 At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3) senescence... 137 5e-33 At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3) senescence... 137 5e-33 At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to GI:3... 137 5e-33 At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to GI:1... 137 5e-33 At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to GI:1... 137 5e-33 At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to GI:1... 137 5e-33 At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / ... 137 5e-33 At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / ... 137 5e-33 At2g35635.1 68415.m04370 ubiquitin family protein contains INTER... 137 5e-33 At1g65350.1 68414.m07413 polyubiquitin, putative similar to poly... 137 5e-33 At1g31340.1 68414.m03835 ubiquitin family protein contains INTER... 137 5e-33 At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to poly... 136 1e-32 At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to polyu... 136 1e-32 At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to polyu... 130 9e-31 At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam ... 113 1e-25 At1g11980.1 68414.m01384 ubiquitin family protein similar to Cha... 85 3e-17 At1g53950.1 68414.m06145 ubiquitin family protein contains INTER... 66 1e-11 At5g42220.1 68418.m05139 ubiquitin family protein contains INTER... 65 4e-11 At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative simi... 61 5e-10 At5g38470.1 68418.m04650 DNA repair protein RAD23, putative simi... 55 4e-08 At2g17190.1 68415.m01985 ubiquitin family protein contains INTER... 53 1e-07 At2g17200.1 68415.m01986 ubiquitin family protein weak similarit... 52 2e-07 At4g02970.1 68417.m00404 ubiquitin family protein contains INTER... 50 9e-07 At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 50 2e-06 At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 50 2e-06 At3g13235.1 68416.m01666 ubiquitin family protein contains INTER... 48 4e-06 At1g79650.3 68414.m09289 DNA repair protein RAD23, putative simi... 48 4e-06 At1g79650.2 68414.m09288 DNA repair protein RAD23, putative simi... 48 4e-06 At1g79650.1 68414.m09287 DNA repair protein RAD23, putative simi... 48 4e-06 At1g16190.1 68414.m01939 DNA repair protein RAD23, putative simi... 48 4e-06 At4g03350.1 68417.m00457 ubiquitin family protein contains INTER... 48 6e-06 At5g11080.1 68418.m01294 ubiquitin family protein contains INTER... 47 8e-06 At4g03370.1 68417.m00459 ubiquitin family protein contains INTER... 47 1e-05 At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 46 2e-05 At4g01000.1 68417.m00135 ubiquitin family protein low similarity... 45 3e-05 At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase fa... 44 6e-05 At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase fa... 44 6e-05 At4g05230.1 68417.m00789 ubiquitin family protein contains INTER... 44 8e-05 At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ... 44 8e-05 At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquiti... 44 1e-04 At2g30100.1 68415.m03663 ubiquitin family protein low similarity... 43 2e-04 At5g16090.1 68418.m01880 ubiquitin family protein contains INTER... 41 5e-04 At3g06455.1 68416.m00747 splicing factor-related contains weak s... 40 0.001 At4g03360.1 68417.m00458 ubiquitin family protein contains INTER... 40 0.001 At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase fa... 40 0.002 At4g02950.1 68417.m00402 ubiquitin family protein contains INTER... 40 0.002 At1g53980.1 68414.m06149 polyubiquitin-related contains similari... 40 0.002 At4g05250.1 68417.m00793 ubiquitin family protein contains INTER... 39 0.003 At4g05310.1 68417.m00809 ubiquitin family protein contains INTER... 37 0.009 At4g05270.1 68417.m00797 ubiquitin family protein contains INTER... 37 0.009 At5g14360.1 68418.m01678 ubiquitin family protein contains INTER... 35 0.047 At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase fa... 34 0.062 At1g11970.1 68414.m01383 hypothetical protein 33 0.11 At5g40630.1 68418.m04932 ubiquitin family protein contains INTER... 33 0.14 At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N domain-... 31 0.44 At1g64470.1 68414.m07309 ubiquitin family protein contains INTER... 31 0.44 At3g14130.1 68416.m01787 (S)-2-hydroxy-acid oxidase, peroxisomal... 30 1.3 At1g22050.1 68414.m02758 ubiquitin family protein contains INTER... 30 1.3 At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp... 30 1.3 At5g12280.1 68418.m01444 hypothetical protein 29 1.8 At3g14150.1 68416.m01789 (S)-2-hydroxy-acid oxidase, peroxisomal... 29 2.3 At1g47680.1 68414.m05297 hypothetical protein 29 2.3 At2g25840.2 68415.m03101 tRNA synthetase class I (W and Y) famil... 28 4.1 At2g25840.1 68415.m03100 tRNA synthetase class I (W and Y) famil... 28 4.1 At4g18360.1 68417.m02723 (S)-2-hydroxy-acid oxidase, peroxisomal... 28 5.4 At2g20420.1 68415.m02383 succinyl-CoA ligase [GDP-forming] beta-... 27 7.1 >At1g23410.1 68414.m02932 ubiquitin extension protein, putative / 40S ribosomal protein S27A (RPS27aA) strong similarity to ubiquitin extension protein (UBQ5) GB:AAA32906 GI:166934 from (Arabidopsis thaliana) Length = 156 Score = 208 bits (509), Expect = 2e-54 Identities = 102/155 (65%), Positives = 113/155 (72%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60 Query: 219 IQKESTLHLVXXXXXXXXXXXXXNYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLRRE 398 IQKESTLHLV Y+ P LAVL+FYKVD +GK+ RL++E Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHTHKKVKLAVLQFYKVDGSGKVQRLKKE 120 Query: 399 CTGEQCGAGVFMAVMEDRHYCGKCHSTMVFKDDDK 503 C CG G FMA DRHYCGKC +T VFK D+ Sbjct: 121 CPSVSCGPGTFMASHFDRHYCGKCGTTYVFKKADE 155 >At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / 40S ribosomal protein S27A (RPS27aB) identical to GI:166936 Length = 157 Score = 206 bits (504), Expect = 6e-54 Identities = 101/153 (66%), Positives = 112/153 (73%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60 Query: 219 IQKESTLHLVXXXXXXXXXXXXXNYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLRRE 398 IQKESTLHLV Y+ P LAVL+FYKVD +GK+ RLR+E Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDGSGKVQRLRKE 120 Query: 399 CTGEQCGAGVFMAVMEDRHYCGKCHSTMVFKDD 497 C CGAG FMA DRHYCGKC T V++ + Sbjct: 121 CPNATCGAGTFMASHFDRHYCGKCGLTYVYQKE 153 >At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / 40S ribosomal protein S27A (RPS27aC) identical to GI:166933, GI:166934 Length = 157 Score = 206 bits (503), Expect = 9e-54 Identities = 100/153 (65%), Positives = 112/153 (73%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60 Query: 219 IQKESTLHLVXXXXXXXXXXXXXNYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLRRE 398 IQKESTLHLV Y+ P LAVL+FYK+D +GK+ RLR+E Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKIDGSGKVQRLRKE 120 Query: 399 CTGEQCGAGVFMAVMEDRHYCGKCHSTMVFKDD 497 C CGAG FMA DRHYCGKC T V++ + Sbjct: 121 CPNATCGAGTFMASHFDRHYCGKCGLTYVYQKE 153 >At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677 Length = 382 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 61 IQKESTLHLV 70 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 137 IQKESTLHLV 146 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 213 IQKESTLHLV 222 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 289 IQKESTLHLV 298 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 365 IQKESTLHLV 374 >At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to GI:928809 Length = 306 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 61 IQKESTLHLV 70 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 137 IQKESTLHLV 146 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 213 IQKESTLHLV 222 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 289 IQKESTLHLV 298 >At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to GI:928809 Length = 306 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 61 IQKESTLHLV 70 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 137 IQKESTLHLV 146 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 213 IQKESTLHLV 222 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 289 IQKESTLHLV 298 >At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3) senescence-associated protein; identical to GI:870791 Length = 312 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 61 IQKESTLHLV 70 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 137 IQKESTLHLV 146 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 213 IQKESTLHLV 222 Score = 66.5 bits (155), Expect = 1e-11 Identities = 32/34 (94%), Positives = 33/34 (97%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 140 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 262 Score = 33.9 bits (74), Expect = 0.082 Identities = 23/49 (46%), Positives = 27/49 (55%) Frame = +1 Query: 118 KLKFKTKRESLPINRG*SSLESSWKMDVPSRTTISRRNPPSTWC*GFVV 264 K K + K L + SSLESS +MDV TT SRR+ TW FVV Sbjct: 255 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVV 303 >At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3) senescence-associated protein; identical to GI:870791 Length = 464 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 61 IQKESTLHLV 70 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 137 IQKESTLHLV 146 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 213 IQKESTLHLV 222 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 289 IQKESTLHLV 298 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 365 IQKESTLHLV 374 Score = 66.5 bits (155), Expect = 1e-11 Identities = 32/34 (94%), Positives = 33/34 (97%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 140 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414 Score = 33.9 bits (74), Expect = 0.082 Identities = 23/49 (46%), Positives = 27/49 (55%) Frame = +1 Query: 118 KLKFKTKRESLPINRG*SSLESSWKMDVPSRTTISRRNPPSTWC*GFVV 264 K K + K L + SSLESS +MDV TT SRR+ TW FVV Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVV 455 >At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3) senescence-associated protein; identical to GI:870791 Length = 388 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 61 IQKESTLHLV 70 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 137 IQKESTLHLV 146 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 213 IQKESTLHLV 222 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 289 IQKESTLHLV 298 Score = 66.5 bits (155), Expect = 1e-11 Identities = 32/34 (94%), Positives = 33/34 (97%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 140 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338 Score = 33.9 bits (74), Expect = 0.082 Identities = 23/49 (46%), Positives = 27/49 (55%) Frame = +1 Query: 118 KLKFKTKRESLPINRG*SSLESSWKMDVPSRTTISRRNPPSTWC*GFVV 264 K K + K L + SSLESS +MDV TT SRR+ TW FVV Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVV 379 >At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3) senescence-associated protein; identical to GI:870791 Length = 464 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 61 IQKESTLHLV 70 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 137 IQKESTLHLV 146 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 213 IQKESTLHLV 222 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 289 IQKESTLHLV 298 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 365 IQKESTLHLV 374 Score = 66.5 bits (155), Expect = 1e-11 Identities = 32/34 (94%), Positives = 33/34 (97%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 140 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414 Score = 33.9 bits (74), Expect = 0.082 Identities = 23/49 (46%), Positives = 27/49 (55%) Frame = +1 Query: 118 KLKFKTKRESLPINRG*SSLESSWKMDVPSRTTISRRNPPSTWC*GFVV 264 K K + K L + SSLESS +MDV TT SRR+ TW FVV Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVV 455 >At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3) senescence-associated protein; identical to GI:870791 Length = 388 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 61 IQKESTLHLV 70 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 137 IQKESTLHLV 146 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 213 IQKESTLHLV 222 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 289 IQKESTLHLV 298 Score = 66.5 bits (155), Expect = 1e-11 Identities = 32/34 (94%), Positives = 33/34 (97%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 140 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338 Score = 33.9 bits (74), Expect = 0.082 Identities = 23/49 (46%), Positives = 27/49 (55%) Frame = +1 Query: 118 KLKFKTKRESLPINRG*SSLESSWKMDVPSRTTISRRNPPSTWC*GFVV 264 K K + K L + SSLESS +MDV TT SRR+ TW FVV Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVV 379 >At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to GI:304117 Length = 229 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 61 IQKESTLHLV 70 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 137 IQKESTLHLV 146 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 213 IQKESTLHLV 222 >At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to GI:166795; similar to N. sylvestris hexameric polyubiquitin, GenBank accession number M74101 Length = 305 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 61 IQKESTLHLV 70 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 137 IQKESTLHLV 146 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 213 IQKESTLHLV 222 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 289 IQKESTLHLV 298 >At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to GI:166795; similar to N. sylvestris hexameric polyubiquitin, GenBank accession number M74101 Length = 229 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 61 IQKESTLHLV 70 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 137 IQKESTLHLV 146 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 213 IQKESTLHLV 222 >At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to GI:166795; similar to N. sylvestris hexameric polyubiquitin, GenBank accession number M74101 Length = 305 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 61 IQKESTLHLV 70 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 137 IQKESTLHLV 146 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 213 IQKESTLHLV 222 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 289 IQKESTLHLV 298 >At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / 60S ribosomal protein L40 (RPL40B) identical to GI:166929, GI:166930 Length = 128 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 61 IQKESTLHLV 70 >At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / 60S ribosomal protein L40 (RPL40A) identical to GI:166930, GI:166931 Length = 128 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 61 IQKESTLHLV 70 >At2g35635.1 68415.m04370 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain Length = 154 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 61 IQKESTLHLV 70 Score = 91.9 bits (218), Expect = 3e-19 Identities = 41/68 (60%), Positives = 54/68 (79%) Frame = +3 Query: 45 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 224 I VKTLTGK I +++EP+DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T DY I+ Sbjct: 79 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIE 138 Query: 225 KESTLHLV 248 S LHLV Sbjct: 139 GGSVLHLV 146 >At1g65350.1 68414.m07413 polyubiquitin, putative similar to polyubiquitin GI:248337 from [Zea mays] Length = 294 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 61 IQKESTLHLV 70 Score = 134 bits (324), Expect = 4e-32 Identities = 65/70 (92%), Positives = 68/70 (97%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE IPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 152 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYN 211 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 212 IQKESTLHLV 221 Score = 130 bits (314), Expect = 7e-31 Identities = 65/70 (92%), Positives = 68/70 (97%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+D N Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-N 135 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 136 IQKESTLHLV 145 Score = 99.1 bits (236), Expect = 2e-21 Identities = 48/53 (90%), Positives = 50/53 (94%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDG 197 MQIFVKTLTGKTITLEVE S TI+NVKAKIQDKEGIPP+QQRLIFAGKQLE G Sbjct: 228 MQIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEGG 280 >At1g31340.1 68414.m03835 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain Length = 156 Score = 137 bits (332), Expect = 5e-33 Identities = 66/70 (94%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 61 IQKESTLHLV 70 Score = 95.1 bits (226), Expect = 3e-20 Identities = 42/68 (61%), Positives = 55/68 (80%) Frame = +3 Query: 45 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQ 224 I VKTLTGK I +++EP+DTI+ +K ++++KEGIPP QQRLI+AGKQL D +T DYNI+ Sbjct: 79 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIE 138 Query: 225 KESTLHLV 248 S LHLV Sbjct: 139 GGSVLHLV 146 >At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to polyubiquitin (ubq12) gene sequence GI:304121 from [Arabidopsis thaliana] Length = 230 Score = 136 bits (329), Expect = 1e-32 Identities = 65/70 (92%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+N+KAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 137 IQKESTLHLV 146 Score = 131 bits (317), Expect = 3e-31 Identities = 64/70 (91%), Positives = 67/70 (95%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGI P+QQRLIFAGKQ EDGRTL+DYN Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGISPDQQRLIFAGKQHEDGRTLADYN 212 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 213 IQKESTLHLV 222 Score = 122 bits (293), Expect = 2e-28 Identities = 57/70 (81%), Positives = 65/70 (92%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIF+KTLTGKT LEVE SDTI+NVKAKIQD EGIPP+Q RLIFAGKQLEDGRTL+DYN Sbjct: 1 MQIFLKTLTGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYN 60 Query: 219 IQKESTLHLV 248 +Q++STLHL+ Sbjct: 61 VQEDSTLHLL 70 >At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to polyubiquitin (ubq9) gene sequence GI:304120 from [Arabidopsis thaliana] Length = 322 Score = 136 bits (328), Expect = 1e-32 Identities = 64/70 (91%), Positives = 69/70 (98%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEG+PP+QQRLIFAGKQL+DGRTL+DYN Sbjct: 79 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYN 138 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 139 IQKESTLHLV 148 Score = 129 bits (311), Expect = 2e-30 Identities = 62/70 (88%), Positives = 66/70 (94%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFV+TLT KTI LEVE SDT +NVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTL+DYN Sbjct: 155 MQIFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 214 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 215 IQKESTLHLV 224 Score = 120 bits (289), Expect = 7e-28 Identities = 61/71 (85%), Positives = 65/71 (91%), Gaps = 1/71 (1%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDG-RTLSDY 215 MQIFV TLTGKTITLEVE SDTI+NVKAKIQDKE I P+QQRLIFAG+QLEDG TL+DY Sbjct: 231 MQIFVNTLTGKTITLEVESSDTIDNVKAKIQDKERIQPDQQRLIFAGEQLEDGYYTLADY 290 Query: 216 NIQKESTLHLV 248 NIQKESTLHLV Sbjct: 291 NIQKESTLHLV 301 Score = 105 bits (251), Expect = 3e-23 Identities = 51/71 (71%), Positives = 60/71 (84%) Frame = +3 Query: 33 VKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSD 212 + MQI KTLT KTIT++V SDTI NVKAKIQD EGIP +QQRLIF+GK L+DGRTL+D Sbjct: 1 MSMQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLAD 60 Query: 213 YNIQKESTLHL 245 Y+IQK+S LHL Sbjct: 61 YSIQKDSILHL 71 >At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to polyubiquitin (ubq8) GI:870793, GB:L05917 [Arabidopsis thaliana] (Genetics 139 (2), 921-939 (1995)) Length = 631 Score = 130 bits (313), Expect = 9e-31 Identities = 63/70 (90%), Positives = 67/70 (95%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFV+TLTGKTITLEV+ SDTI+NVKAKIQDKEGI P QQRLIFAGKQLEDGRTL+DYN Sbjct: 79 MQIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQLEDGRTLADYN 138 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 139 IQKESTLHLV 148 Score = 117 bits (282), Expect = 5e-27 Identities = 57/70 (81%), Positives = 64/70 (91%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 +QI+ KTLT KTITL+VE SD+I NVKAKIQ+KEGIP +QQRLIFAGKQLEDG TL+DYN Sbjct: 3 IQIYAKTLTEKTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADYN 62 Query: 219 IQKESTLHLV 248 IQKESTLHLV Sbjct: 63 IQKESTLHLV 72 Score = 107 bits (257), Expect = 6e-24 Identities = 54/75 (72%), Positives = 62/75 (82%) Frame = +3 Query: 24 VRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRT 203 ++R MQIF+KTLTGKTI LEVE SDTI NVK KIQ KEGI P+QQ LIF G+QLEDG T Sbjct: 547 LQRGGMQIFIKTLTGKTIILEVESSDTIANVKEKIQVKEGIKPDQQMLIFFGQQLEDGVT 606 Query: 204 LSDYNIQKESTLHLV 248 L DY+I K+STL+LV Sbjct: 607 LGDYDIHKKSTLYLV 621 Score = 107 bits (256), Expect = 7e-24 Identities = 56/75 (74%), Positives = 61/75 (81%), Gaps = 2/75 (2%) Frame = +3 Query: 30 RVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI--PPNQQRLIFAGKQLEDGRT 203 R MQIFVKTLT K I LEVE DTIENVKA +QDKEGI PN QRLIF GK+L+DG T Sbjct: 316 RCGMQIFVKTLTRKRINLEVESWDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELKDGCT 375 Query: 204 LSDYNIQKESTLHLV 248 L+DY+IQKESTLHLV Sbjct: 376 LADYSIQKESTLHLV 390 Score = 101 bits (243), Expect = 3e-22 Identities = 50/69 (72%), Positives = 56/69 (81%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 MQIFVK GK ITLEV SDTI++VKAKIQDK G PP+QQ L+F G QL+DGRTL DYN Sbjct: 393 MQIFVKLFGGKIITLEVLSSDTIKSVKAKIQDKVGSPPDQQILLFRGGQLQDGRTLGDYN 452 Query: 219 IQKESTLHL 245 I+ ESTLHL Sbjct: 453 IRNESTLHL 461 Score = 92.7 bits (220), Expect = 2e-19 Identities = 51/78 (65%), Positives = 57/78 (73%), Gaps = 5/78 (6%) Frame = +3 Query: 30 RVKMQIFVKTL-----TGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 194 R M IFVK L TG+ LEVE SDTI+NVKAK+QDKE IP + RLIFAGK LE Sbjct: 235 RGDMYIFVKNLPYNSFTGENFILEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEG 294 Query: 195 GRTLSDYNIQKESTLHLV 248 GRTL+ YNIQK STL+LV Sbjct: 295 GRTLAHYNIQKGSTLYLV 312 Score = 89.0 bits (211), Expect = 2e-18 Identities = 48/76 (63%), Positives = 58/76 (76%), Gaps = 7/76 (9%) Frame = +3 Query: 39 MQIFVKTLTGK-----TITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQL--EDG 197 MQIFV T +GK T+TL+VE SDTIENVKAKIQD+EG+ P+ QRLIF G++L ED Sbjct: 155 MQIFVSTFSGKNFTSDTLTLKVESSDTIENVKAKIQDREGLRPDHQRLIFHGEELFTEDN 214 Query: 198 RTLSDYNIQKESTLHL 245 RTL+DY I+ STL L Sbjct: 215 RTLADYGIRNRSTLCL 230 Score = 88.6 bits (210), Expect = 3e-18 Identities = 49/75 (65%), Positives = 54/75 (72%), Gaps = 7/75 (9%) Frame = +3 Query: 39 MQIFVKTL-------TGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDG 197 MQIFVKT T KTITLEVE SDTI+NVK KIQ K GIP ++QRLIF G+ L Sbjct: 469 MQIFVKTFSFSGETPTCKTITLEVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGS 528 Query: 198 RTLSDYNIQKESTLH 242 RTL DYNIQK ST+H Sbjct: 529 RTLLDYNIQKGSTIH 543 >At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam profile: PF00240 ubiquitin family Length = 158 Score = 113 bits (271), Expect = 1e-25 Identities = 54/78 (69%), Positives = 62/78 (79%) Frame = +3 Query: 15 GDSVRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 194 G R M IF+KTLTG+ I LEVE DTIEN+KAKIQDK+GIP +QQRLIF GKQLED Sbjct: 78 GPDFRHEVMFIFIKTLTGRRIVLEVENCDTIENIKAKIQDKQGIPVDQQRLIFKGKQLED 137 Query: 195 GRTLSDYNIQKESTLHLV 248 G TL+DYNIQ +S LHL+ Sbjct: 138 GLTLADYNIQNDSILHLI 155 >At1g11980.1 68414.m01384 ubiquitin family protein similar to Chain A, Structure Of Ubiquitin-Like Protein, Rub1 GI:6729726 from [Arabidopsis thaliana] Length = 78 Score = 85.0 bits (201), Expect = 3e-17 Identities = 38/70 (54%), Positives = 52/70 (74%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 M+I VKTLT K I +E+E +DTIE +K +I++KEGIPP QR+++ GKQL D T YN Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYN 60 Query: 219 IQKESTLHLV 248 +++ S LHLV Sbjct: 61 LERGSVLHLV 70 >At1g53950.1 68414.m06145 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain Length = 216 Score = 66.5 bits (155), Expect = 1e-11 Identities = 31/48 (64%), Positives = 38/48 (79%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGK 182 M IF+KTLTG+T T EV+ SDTI +KAK ++KEGIP QQRLIF G+ Sbjct: 50 MMIFIKTLTGRTNTYEVKGSDTIRELKAKHEEKEGIPVEQQRLIFQGR 97 Score = 64.5 bits (150), Expect = 5e-11 Identities = 32/69 (46%), Positives = 47/69 (68%) Frame = +3 Query: 33 VKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSD 212 V M+IFV T+ KT LEV+ SDTI+ +K+ I D+ G P +QQ L G +L++ T+SD Sbjct: 139 VLMRIFVSTIKEKTFILEVKGSDTIKKLKSMIHDQGGPPVDQQDLNHLGTKLKNNATISD 198 Query: 213 YNIQKESTL 239 YNI+ ++ L Sbjct: 199 YNIKPDANL 207 Score = 28.3 bits (60), Expect = 4.1 Identities = 14/27 (51%), Positives = 17/27 (62%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVK 119 M I +KTL GK I LEVE S ++K Sbjct: 1 MHISIKTLEGKRIKLEVEDSSNTIDLK 27 >At5g42220.1 68418.m05139 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain Length = 879 Score = 64.9 bits (151), Expect = 4e-11 Identities = 28/70 (40%), Positives = 46/70 (65%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 +++ +KTL +T T +V ++T+ K KI + G+P QQRLIF G+ L+D LS+Y+ Sbjct: 24 LELNIKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSEYH 83 Query: 219 IQKESTLHLV 248 ++ TLHL+ Sbjct: 84 LENGHTLHLI 93 >At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative similar to SP|P39940 Ubiquitin--protein ligase RSP5 (EC 6.3.2.-) {Saccharomyces cerevisiae}; contains Pfam profiles PF00240: Ubiquitin family, PF00632: HECT-domain (ubiquitin-transferase) Length = 873 Score = 61.3 bits (142), Expect = 5e-10 Identities = 29/72 (40%), Positives = 51/72 (70%), Gaps = 1/72 (1%) Frame = +3 Query: 36 KMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSD 212 ++QIFV+ ++G KTI + E DT+E + +I+ K IP +QR+I+ GKQL+ +L+ Sbjct: 94 RLQIFVRMMSGGKTIVIHAEKYDTVEKLHQRIEWKTKIPALEQRVIYKGKQLQRENSLTY 153 Query: 213 YNIQKESTLHLV 248 Y+I+++++L LV Sbjct: 154 YSIEQDASLQLV 165 >At5g38470.1 68418.m04650 DNA repair protein RAD23, putative similar to DNA repair by nucleotide excision (NER) RAD23 protein, isoform I GI:1914683 from [Daucus carota] Length = 378 Score = 54.8 bits (126), Expect = 4e-08 Identities = 28/67 (41%), Positives = 42/67 (62%), Gaps = 2/67 (2%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPNQQRLIFAGKQLEDGRTLSD 212 M+IFVKTL+G +EV+P+D + +VK I+ +G P +Q LI GK L+D TL + Sbjct: 1 MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAEYPAAKQMLIHQGKVLKDETTLEE 60 Query: 213 YNIQKES 233 N+ + S Sbjct: 61 NNVVENS 67 >At2g17190.1 68415.m01985 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain Length = 538 Score = 53.2 bits (122), Expect = 1e-07 Identities = 24/72 (33%), Positives = 40/72 (55%) Frame = +3 Query: 33 VKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSD 212 V + + V+ G ++ T+E+ K I +P NQQRLI+ G+ L+D +TL Sbjct: 16 VAVAVNVRCSNGTKFSVTTSLDSTVESFKELIAQNSDVPANQQRLIYKGRILKDDQTLLS 75 Query: 213 YNIQKESTLHLV 248 Y +Q + T+H+V Sbjct: 76 YGLQADHTVHMV 87 >At2g17200.1 68415.m01986 ubiquitin family protein weak similarity to PLIC-2 (ubiquitin-like type II) [Homo sapiens] GI:9937505; contains Pfam profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N domain Length = 551 Score = 52.4 bits (120), Expect = 2e-07 Identities = 21/66 (31%), Positives = 38/66 (57%) Frame = +3 Query: 51 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKE 230 ++ G +++ T+E+ K + +P NQQRLI+ G+ L+D +TL Y +Q + Sbjct: 22 IRCSNGTKFSVKTSLDSTVESFKELVAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81 Query: 231 STLHLV 248 T+H+V Sbjct: 82 HTIHMV 87 >At4g02970.1 68417.m00404 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain Length = 270 Score = 50.4 bits (115), Expect = 9e-07 Identities = 25/69 (36%), Positives = 40/69 (57%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 M +++ T TG + ++ ++ +T+ +K KI+ +GIP ++Q L GK LED DY Sbjct: 1 MNVYIDTETGSSFSITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60 Query: 219 IQKESTLHL 245 I ES L L Sbjct: 61 ILFESRLLL 69 >At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N domain; Length = 299 Score = 49.6 bits (113), Expect = 2e-06 Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 3/68 (4%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLS 209 M+IFVKTL G +EV+P D++ +VK I+ +G P +Q LI GK L+D T+ Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60 Query: 210 DYNIQKES 233 + + + S Sbjct: 61 ENKVAENS 68 >At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N domain; Length = 419 Score = 49.6 bits (113), Expect = 2e-06 Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 3/68 (4%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLS 209 M+IFVKTL G +EV+P D++ +VK I+ +G P +Q LI GK L+D T+ Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60 Query: 210 DYNIQKES 233 + + + S Sbjct: 61 ENKVAENS 68 >At3g13235.1 68416.m01666 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain Length = 414 Score = 48.4 bits (110), Expect = 4e-06 Identities = 22/70 (31%), Positives = 43/70 (61%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 M+I V T + ITL+V+ +T+ENVKA ++ + +P QQ+L++ G ++ + LS Sbjct: 1 MRITVMTAGEQIITLDVDSQETVENVKALLEVESNVPIQQQQLLYNGNEMGNSDKLSALG 60 Query: 219 IQKESTLHLV 248 ++ + L ++ Sbjct: 61 VKDDDLLMMM 70 >At1g79650.3 68414.m09289 DNA repair protein RAD23, putative similar to DNA repair by nucleotide excision (NER) RAD23 protein, isoform II GI:1914685 from [Daucus carota]; contains Pfam profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N domain Length = 351 Score = 48.4 bits (110), Expect = 4e-06 Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 3/70 (4%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLS 209 M++ VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60 Query: 210 DYNIQKESTL 239 + + +E L Sbjct: 61 ENKVTEEGFL 70 >At1g79650.2 68414.m09288 DNA repair protein RAD23, putative similar to DNA repair by nucleotide excision (NER) RAD23 protein, isoform II GI:1914685 from [Daucus carota]; contains Pfam profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N domain Length = 365 Score = 48.4 bits (110), Expect = 4e-06 Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 3/70 (4%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLS 209 M++ VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60 Query: 210 DYNIQKESTL 239 + + +E L Sbjct: 61 ENKVTEEGFL 70 >At1g79650.1 68414.m09287 DNA repair protein RAD23, putative similar to DNA repair by nucleotide excision (NER) RAD23 protein, isoform II GI:1914685 from [Daucus carota]; contains Pfam profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N domain Length = 371 Score = 48.4 bits (110), Expect = 4e-06 Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 3/70 (4%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLS 209 M++ VKTL G + V PSDTI VK I+D +G P QQ LI GK L+D +L Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60 Query: 210 DYNIQKESTL 239 + + +E L Sbjct: 61 ENKVTEEGFL 70 >At1g16190.1 68414.m01939 DNA repair protein RAD23, putative similar to DNA repair by nucleotide excision (NER) RAD23 protein, isoform II GI:1914685 from [Daucus carota] Length = 368 Score = 48.4 bits (110), Expect = 4e-06 Identities = 29/70 (41%), Positives = 39/70 (55%), Gaps = 3/70 (4%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPNQQRLIFAGKQLEDGRTLS 209 M++ VKTL G + V P+DTI VK I+D K+ P QQ LI GK L+D TL Sbjct: 1 MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60 Query: 210 DYNIQKESTL 239 + + +E L Sbjct: 61 ENKVTEEGFL 70 >At4g03350.1 68417.m00457 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain Length = 263 Score = 47.6 bits (108), Expect = 6e-06 Identities = 24/67 (35%), Positives = 38/67 (56%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 M + + T TG + ++ ++ +T+ +K KI+ +GIP ++Q L GK LED DY Sbjct: 1 MNVDIDTETGSSFSITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60 Query: 219 IQKESTL 239 I ES L Sbjct: 61 ILFESLL 67 >At5g11080.1 68418.m01294 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain Length = 352 Score = 47.2 bits (107), Expect = 8e-06 Identities = 26/71 (36%), Positives = 45/71 (63%), Gaps = 1/71 (1%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQ-RLIFAGKQLEDGRTLSDY 215 ++I +K L T TL VE + + ++K I G+ P +Q RL+F G+ L++ + LSDY Sbjct: 11 IRIKIKILHSTTHTLSVERTIPVRDLKQDICYYCGVSPERQPRLLFRGRVLKNDQRLSDY 70 Query: 216 NIQKESTLHLV 248 ++++ TL+LV Sbjct: 71 HVEEGHTLYLV 81 >At4g03370.1 68417.m00459 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain Length = 295 Score = 46.8 bits (106), Expect = 1e-05 Identities = 22/69 (31%), Positives = 41/69 (59%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 M++ V+ +G T ++++ DT+ K KI+ + IP ++Q + F GK LED + +++ Sbjct: 1 MKMTVENESGSTFSIDIGLQDTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWD 60 Query: 219 IQKESTLHL 245 I + LHL Sbjct: 61 ILQNPLLHL 69 >At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13 [Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains Pfam domains, PF00439: Bromodomain and PF00240: Ubiquitin family Length = 1919 Score = 46.0 bits (104), Expect = 2e-05 Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 1/74 (1%) Frame = +3 Query: 30 RVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQ-RLIFAGKQLEDGRTL 206 R M+I VK+L GK L V +++ +++AK K + ++ + GK+L+D ++L Sbjct: 658 RGSMKIIVKSLGGKGSKLHVGIEESVSSLRAKASRKLDFKETEAVKMFYKGKELDDEKSL 717 Query: 207 SDYNIQKESTLHLV 248 + N+Q S +HL+ Sbjct: 718 AAQNVQPNSLVHLI 731 >At4g01000.1 68417.m00135 ubiquitin family protein low similarity to SP|P13117 Ubiquitin. {Neurospora crassa}; contains Pfam profile PF00240: Ubiquitin family Length = 415 Score = 45.2 bits (102), Expect = 3e-05 Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 1/71 (1%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVE-PSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 215 +Q FV+ L GK++TL P E +K +I ++ IP + QRLI G Q+ DG +S Sbjct: 9 LQFFVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQRLISGGYQISDGSAIS-- 66 Query: 216 NIQKESTLHLV 248 Q ++T++LV Sbjct: 67 --QPDATVNLV 75 >At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase family protein / ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain Length = 566 Score = 44.4 bits (100), Expect = 6e-05 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 2/68 (2%) Frame = +3 Query: 51 VKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPNQQRLIFAGKQLEDGRTLSDYNIQ 224 VKT GK VE I VK +I K G + P++Q +++ G++LED ++D Sbjct: 115 VKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRN 174 Query: 225 KESTLHLV 248 +S LHL+ Sbjct: 175 DDSVLHLL 182 >At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase family protein / ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain Length = 566 Score = 44.4 bits (100), Expect = 6e-05 Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 2/68 (2%) Frame = +3 Query: 51 VKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPNQQRLIFAGKQLEDGRTLSDYNIQ 224 VKT GK VE I VK +I K G + P++Q +++ G++LED ++D Sbjct: 115 VKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRN 174 Query: 225 KESTLHLV 248 +S LHL+ Sbjct: 175 DDSVLHLL 182 >At4g05230.1 68417.m00789 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain Length = 206 Score = 44.0 bits (99), Expect = 8e-05 Identities = 22/69 (31%), Positives = 37/69 (53%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 M +F +T +G T +E+ DT+ +K KI+ + IP ++Q L+F G L+D + Sbjct: 1 MDVFFETRSGSTFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQDHLDIEQCV 60 Query: 219 IQKESTLHL 245 I S + L Sbjct: 61 ILNHSRIQL 69 >At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding bromodomain-containing protein low similarity to SP|P51123 Transcription initiation factor TFIID 230 kDa subunit {Drosophila melanogaster}; contains Pfam profiles: PF00439 bromodomain, PF00240: Ubiquitin family Length = 1700 Score = 44.0 bits (99), Expect = 8e-05 Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 1/77 (1%) Frame = +3 Query: 21 SVRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQ-RLIFAGKQLEDG 197 +++ M+I + L GK L V +++ ++KAK K + ++ + GK+LED Sbjct: 494 AIKLQTMKIKLSNLGGKGSLLTVGREESVSSLKAKASRKLDFKETEAVKMFYMGKELEDE 553 Query: 198 RTLSDYNIQKESTLHLV 248 ++L++ N+Q S +HL+ Sbjct: 554 KSLAEQNVQPNSLVHLL 570 >At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquitin SP:P42740 from [Aglaothamnion neglectum] Length = 79 Score = 43.6 bits (98), Expect = 1e-04 Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 3/72 (4%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGK---QLEDGRTLS 209 MQ+F+ GK +EVE + TI ++K KI D G+ Q L GK ++ G T+ Sbjct: 1 MQVFIIDEDGKKYCVEVEKTTTIADMKTKIYDATGMENAYQYLEHRGKIVLEVHGGTTMD 60 Query: 210 DYNIQKESTLHL 245 DY I+ H+ Sbjct: 61 DYKIKACDIFHM 72 >At2g30100.1 68415.m03663 ubiquitin family protein low similarity to SP|Q9UQ13 Leucine-rich repeat protein SHOC-2 (Ras-binding protein Sur-8) {Homo sapiens}; contains Pfam profiles PF00240: Ubiquitin family, PF01535: PPR repeat, PF00560: Leucine Rich Repeat Length = 897 Score = 42.7 bits (96), Expect = 2e-04 Identities = 21/61 (34%), Positives = 36/61 (59%) Frame = +3 Query: 66 GKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 245 GK+I L V P T++++K+++Q + P Q+LIF GK L + TL ++ + L L Sbjct: 544 GKSIPLSVSPDCTVKDLKSQLQPITNVLPRGQKLIFKGKVLVETSTLKQSDVGSGAKLML 603 Query: 246 V 248 + Sbjct: 604 M 604 >At5g16090.1 68418.m01880 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain Length = 142 Score = 41.1 bits (92), Expect = 5e-04 Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 3/73 (4%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLIFAGKQLEDGRTLS 209 M+I VKTL G +EV+P+D++ VK I+ G P QQ LI ++L D T+ Sbjct: 1 MKIIVKTLKGIRFEIEVKPNDSVAEVKKNIETVMGASEYPAAQQILIHKREKLRDETTME 60 Query: 210 DYNIQKESTLHLV 248 + +S + ++ Sbjct: 61 ANKVFDKSVIAII 73 >At3g06455.1 68416.m00747 splicing factor-related contains weak similarity to Swiss-Prot:Q12874 splicing factor 3A subunit 3 (Spliceosome associated protein 61, SAP 61, SF3a60) [Homo sapiens] Length = 366 Score = 40.3 bits (90), Expect = 0.001 Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 1/71 (1%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEV-EPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 215 +Q FV+ L GK++TL P E +K +I ++ IP + QRLI G Q+ +S Sbjct: 9 LQFFVRLLDGKSVTLTFSSPIACGEQIKQRIFEQTKIPTHLQRLISGGFQIPGASAIS-- 66 Query: 216 NIQKESTLHLV 248 Q ++T++LV Sbjct: 67 --QSDTTMNLV 75 >At4g03360.1 68417.m00458 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain Length = 284 Score = 39.9 bits (89), Expect = 0.001 Identities = 20/69 (28%), Positives = 39/69 (56%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 +++ ++ +G + T++V DT+ +K KI+ +G P ++Q LIF K L+D + Sbjct: 2 IKVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 61 Query: 219 IQKESTLHL 245 I+ S + L Sbjct: 62 IRHNSRILL 70 >At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase family protein / ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain, Pfam profile PF00454: Phosphatidylinositol 3- and 4-kinase Length = 574 Score = 39.5 bits (88), Expect = 0.002 Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 3/71 (4%) Frame = +3 Query: 45 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKE---GIPPNQQRLIFAGKQLEDGRTLSDY 215 I V+T+ GK L VE S + VK +I KE GIP + + L G++L+D R ++D Sbjct: 111 ISVRTVDGKEFELVVERSRNVGYVKQQIASKEKELGIPRDHE-LTLDGEELDDQRLITDL 169 Query: 216 NIQKESTLHLV 248 ++ +HL+ Sbjct: 170 CQNGDNVIHLL 180 >At4g02950.1 68417.m00402 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain Length = 318 Score = 39.5 bits (88), Expect = 0.002 Identities = 20/69 (28%), Positives = 38/69 (55%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYN 218 + + ++ +G + T++V DT+ +K KI+ +G P ++Q LIF K L+D + Sbjct: 36 ISVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 95 Query: 219 IQKESTLHL 245 I+ S + L Sbjct: 96 IRHNSRILL 104 >At1g53980.1 68414.m06149 polyubiquitin-related contains similarity to polyubiquitin GI:166336 from (Aglaothamnion neglectum) Length = 91 Score = 39.5 bits (88), Expect = 0.002 Identities = 22/49 (44%), Positives = 28/49 (57%) Frame = +3 Query: 6 LWYGDSVRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 152 L G + M IFV TL GKT LEV+ S+ I+ VK I D+ +PP Sbjct: 38 LGLGQGPQGEMMSIFVSTLKGKTFNLEVKGSEIIQQVKNMIHDQ--VPP 84 Score = 28.7 bits (61), Expect = 3.1 Identities = 13/27 (48%), Positives = 18/27 (66%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVK 119 M+I +KT GKTI LE+E S ++K Sbjct: 1 MKILIKTEKGKTINLELEDSSETIDIK 27 >At4g05250.1 68417.m00793 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain Length = 318 Score = 38.7 bits (86), Expect = 0.003 Identities = 19/52 (36%), Positives = 31/52 (59%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 194 M +F +T +G +E+ DT+ +K KI+ + IP ++Q LIF G L+D Sbjct: 1 MDVFFETQSGDKFEIELGYWDTMLEIKEKIEKYQCIPVSKQTLIFQGVVLQD 52 >At4g05310.1 68417.m00809 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain Length = 415 Score = 37.1 bits (82), Expect = 0.009 Identities = 18/47 (38%), Positives = 29/47 (61%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAG 179 M+ V+ L G + +EVE +DT+ VK KI+ + +P ++Q LI G Sbjct: 1 MKFVVEILGGSSFEIEVERTDTLLVVKQKIEKSQRVPVSKQTLIVDG 47 >At4g05270.1 68417.m00797 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain Length = 129 Score = 37.1 bits (82), Expect = 0.009 Identities = 19/47 (40%), Positives = 28/47 (59%) Frame = +3 Query: 39 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAG 179 M+ V+ L G + LEV+ DT+ VK KI+ + IP ++Q LI G Sbjct: 1 MKFLVENLNGSSFELEVDYRDTLLVVKQKIERSQHIPVSKQTLIVDG 47 >At5g14360.1 68418.m01678 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain Length = 163 Score = 34.7 bits (76), Expect = 0.047 Identities = 15/38 (39%), Positives = 22/38 (57%) Frame = +3 Query: 81 LEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 194 L +E + T +K + G+ P QQRL+F GK+ ED Sbjct: 83 LSIEATSTFGELKMVLSLLTGLEPKQQRLVFKGKERED 120 >At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase family protein similar to phosphatidylinositol 4-kinase type-II beta [Homo sapiens] GI:20159767; contains Pfam profile PF00454: Phosphatidylinositol 3- and 4-kinase Length = 630 Score = 34.3 bits (75), Expect = 0.062 Identities = 18/56 (32%), Positives = 29/56 (51%) Frame = +3 Query: 36 KMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRT 203 + ++FV+T TG + LE++ SD VK K+Q P + L F L++ T Sbjct: 40 RRRVFVQTETGCVLGLELDRSDNAHTVKRKLQVALNFPIEESSLTFGDLVLKNDLT 95 >At1g11970.1 68414.m01383 hypothetical protein Length = 99 Score = 33.5 bits (73), Expect = 0.11 Identities = 14/40 (35%), Positives = 26/40 (65%) Frame = +3 Query: 30 RVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 149 R + ++ + L+ K I +E++P D IE +K I+++ GIP Sbjct: 40 RQRFKVKSQFLSEKKIDIEIDPMDKIEQIKEGIEEEIGIP 79 >At5g40630.1 68418.m04932 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain Length = 165 Score = 33.1 bits (72), Expect = 0.14 Identities = 17/59 (28%), Positives = 30/59 (50%) Frame = +3 Query: 18 DSVRRVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED 194 DS + + V T++ + + ++ + T +K I GI +QRL+F GK+ ED Sbjct: 72 DSNTEDLISLRVSTVSQLSYEISIDANSTFGELKMMIAIVSGIEAKEQRLLFRGKERED 130 >At2g12550.1 68415.m01357 ubiquitin-associated (UBA)/TS-N domain-containing protein low similarity to NUB1 (NEDD8-interacting protein) [Homo sapiens] GI:13383476; contains Pfam profile PF00627: UBA/TS-N domain Length = 562 Score = 31.5 bits (68), Expect = 0.44 Identities = 20/58 (34%), Positives = 33/58 (56%), Gaps = 5/58 (8%) Frame = +3 Query: 81 LEVEPSD-TIENVKAKIQDKEGIPPNQQRLIFAGKQLEDG----RTLSDYNIQKESTL 239 LEVE + T+ ++ ++ + G+ P +LIFAGK L+D TLS I++ S + Sbjct: 14 LEVELENWTLNMLRDEVAKRSGLDPESIKLIFAGKILKDDGDATLTLSQLGIKENSKI 71 >At1g64470.1 68414.m07309 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain Length = 213 Score = 31.5 bits (68), Expect = 0.44 Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 2/70 (2%) Frame = +3 Query: 45 IFVKTLTGKTITLEVEPSDTIENVKAKI-QDKEGIPP-NQQRLIFAGKQLEDGRTLSDYN 218 + V T GK V+ + +K +I ++ +G P + Q ++F G++L+D R + Sbjct: 113 VTVITTCGKVFQFHVDRRRNVGYLKKRISKEGKGFPEVDDQEILFKGEKLDDNRIIDGIC 172 Query: 219 IQKESTLHLV 248 S +HL+ Sbjct: 173 KDGNSVIHLL 182 >At3g14130.1 68416.m01787 (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative similar to Chain A, Glycolate Oxidase (E.C.1.1.3.15) Mutant With Tyr 24 Replaced By Phe (Y24f) gi|999542 Length = 363 Score = 29.9 bits (64), Expect = 1.3 Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 2/42 (4%) Frame = -3 Query: 248 HQVEGGF--LLDIVVREGTSIFQLLSSEDQPLLIGRDSLFVL 129 H V+G LLD VR GT +F+ L+ Q +LIGR ++ L Sbjct: 272 HAVKGRIPVLLDGGVRRGTDVFKALALGAQAVLIGRPIVYGL 313 >At1g22050.1 68414.m02758 ubiquitin family protein contains INTERPRO:IPR000626 ubiquitin domain Length = 119 Score = 29.9 bits (64), Expect = 1.3 Identities = 19/46 (41%), Positives = 28/46 (60%), Gaps = 7/46 (15%) Frame = +3 Query: 96 SDTIENVKAKI-----QDKEGIPP--NQQRLIFAGKQLEDGRTLSD 212 S T+ ++K K+ +DKE P N +LI AGK LE+ RTL++ Sbjct: 28 SMTVSSLKEKLISQWPKDKENTPKTVNDMKLINAGKILENNRTLAE 73 >At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / ubiquitin family protein similar to SP|Q15459 Splicing factor 3 subunit 1 (Spliceosome associated protein 114) {Homo sapiens}; contains Pfam profiles PF00240: Ubiquitin family, PF01805: Surp module Length = 785 Score = 29.9 bits (64), Expect = 1.3 Identities = 14/42 (33%), Positives = 25/42 (59%) Frame = +3 Query: 96 SDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 221 S+ + ++K KI + IP N+Q+L L+D +L+ YN+ Sbjct: 726 SENVGSLKEKIAGEIQIPANKQKLSGKAGFLKDNMSLAHYNV 767 >At5g12280.1 68418.m01444 hypothetical protein Length = 419 Score = 29.5 bits (63), Expect = 1.8 Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%) Frame = +3 Query: 69 KTITLEVEP-SDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNI 221 K + + V+ S+ + ++K KI + P N+Q+L L+D +L+ YN+ Sbjct: 357 KVVKITVQSLSENVASLKEKISGEIQFPTNKQKLRGKAGFLKDNTSLAHYNV 408 >At3g14150.1 68416.m01789 (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative similar to (S)-2-hydroxy-acid oxidase, peroxisomal (Glycolate oxidase, GOX) (Short chain alpha-hydroxy acid oxidase) [Spinacia oleracea] SWISS-PROT:P05414 Length = 363 Score = 29.1 bits (62), Expect = 2.3 Identities = 15/33 (45%), Positives = 21/33 (63%) Frame = -3 Query: 227 LLDIVVREGTSIFQLLSSEDQPLLIGRDSLFVL 129 LLD VR GT +F+ L+ Q +LIGR ++ L Sbjct: 281 LLDGGVRRGTDVFKALALGAQAVLIGRPIIYGL 313 >At1g47680.1 68414.m05297 hypothetical protein Length = 104 Score = 29.1 bits (62), Expect = 2.3 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%) Frame = +3 Query: 90 EPSDTIENVKAKIQDKEG-IPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 245 E D +E++ K ++ G + +L +G+Q+ R L DY +Q E+T L Sbjct: 31 EEDDGMEDITKKYHNEVGEVVQGVPQLRRSGRQISQSRYLEDYVMQSETTYGL 83 >At2g25840.2 68415.m03101 tRNA synthetase class I (W and Y) family protein contains Pfam profile: PF00579 tRNA synthetases class I (W and Y) Length = 412 Score = 28.3 bits (60), Expect = 4.1 Identities = 14/42 (33%), Positives = 20/42 (47%) Frame = -3 Query: 521 LEGTYLFVVVFEDHRAVTLPAVVTVLHHRHEHSGAALLACAL 396 L+ TY + + DH A+TLP L + A LAC + Sbjct: 92 LQDTYETLFIIVDHHAITLPYDTRQLGKATTDTAALYLACGI 133 >At2g25840.1 68415.m03100 tRNA synthetase class I (W and Y) family protein contains Pfam profile: PF00579 tRNA synthetases class I (W and Y) Length = 408 Score = 28.3 bits (60), Expect = 4.1 Identities = 14/42 (33%), Positives = 20/42 (47%) Frame = -3 Query: 521 LEGTYLFVVVFEDHRAVTLPAVVTVLHHRHEHSGAALLACAL 396 L+ TY + + DH A+TLP L + A LAC + Sbjct: 92 LQDTYETLFIIVDHHAITLPYDTRQLGKATTDTAALYLACGI 133 >At4g18360.1 68417.m02723 (S)-2-hydroxy-acid oxidase, peroxisomal, putative / glycolate oxidase, putative / short chain alpha-hydroxy acid oxidase, putative similar to (S)-2-hydroxy-acid oxidase, peroxisomal (Glycolate oxidase, GOX) (Short chain alpha-hydroxy acid oxidase) [Spinacia oleracea] SWISS-PROT:P05414 Length = 368 Score = 27.9 bits (59), Expect = 5.4 Identities = 14/32 (43%), Positives = 19/32 (59%) Frame = -3 Query: 224 LDIVVREGTSIFQLLSSEDQPLLIGRDSLFVL 129 LD VR GT +F+ L+ + +GR SLF L Sbjct: 284 LDGGVRRGTDVFKALALGASGVFVGRPSLFSL 315 >At2g20420.1 68415.m02383 succinyl-CoA ligase [GDP-forming] beta-chain, mitochondrial, putative / succinyl-CoA synthetase, beta chain, putative / SCS-beta, putative identical to SP|O82662 Succinyl-CoA ligase [GDP-forming] beta-chain, mitochondrial precursor (EC 6.2.1.4) (Succinyl-CoA synthetase, beta chain) (SCS- beta) {Arabidopsis thaliana}; similar to SP|O97580 Succinyl-CoA ligase [ADP-forming] beta-chain, mitochondrial precursor (EC 6.2.1.5) {Sus scrofa}; contains Pfam profiles PF00549: CoA-ligase, PF02222: ATP-grasp domain Length = 421 Score = 27.5 bits (58), Expect = 7.1 Identities = 15/51 (29%), Positives = 26/51 (50%) Frame = +3 Query: 96 SDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 248 + ++E VK IQD + PN+ L+ + L GR L + + +H+V Sbjct: 51 ASSLEEVKKAIQD---VFPNESELVVKSQILAGGRGLGTFKSGLKGGVHIV 98 Database: arabidopsis Posted date: Oct 4, 2007 10:56 AM Number of letters in database: 12,070,560 Number of sequences in database: 28,952 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 12,492,204 Number of Sequences: 28952 Number of extensions: 245282 Number of successful extensions: 803 Number of sequences better than 10.0: 75 Number of HSP's better than 10.0 without gapping: 718 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 797 length of database: 12,070,560 effective HSP length: 77 effective length of database: 9,841,256 effective search space used: 1180950720 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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