Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_D08
         (348 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific tran...    24   1.4  
AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    24   1.4  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    24   1.4  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    24   1.9  
DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.       22   7.5  

>AY785361-1|AAV52865.1|  960|Anopheles gambiae male-specific
           transcription factor FRU-MA protein.
          Length = 960

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +1

Query: 58  SKNHTNHNQNRKAHRNGIKKPRKTRHESTLXHGSKIFKE 174
           S N++N+N N  ++ N         + ++L HG    KE
Sbjct: 196 SSNNSNNNNNSSSNNNNNTISSNNNNNNSLHHGPLRDKE 234



 Score = 21.4 bits (43), Expect = 9.9
 Identities = 7/23 (30%), Positives = 11/23 (47%)
 Frame = +1

Query: 70  TNHNQNRKAHRNGIKKPRKTRHE 138
           +N+N N   H   ++    T HE
Sbjct: 217 SNNNNNNSLHHGPLRDKELTEHE 239


>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +1

Query: 58  SKNHTNHNQNRKAHRNGIKKPRKTRHESTLXHGSKIFKE 174
           S N++N+N N  ++ N         + ++L HG    KE
Sbjct: 196 SSNNSNNNNNSSSNNNNNTISSNNNNNNSLHHGPLRDKE 234



 Score = 21.4 bits (43), Expect = 9.9
 Identities = 7/23 (30%), Positives = 11/23 (47%)
 Frame = +1

Query: 70  TNHNQNRKAHRNGIKKPRKTRHE 138
           +N+N N   H   ++    T HE
Sbjct: 217 SNNNNNNSLHHGPLRDKELTEHE 239


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 24.2 bits (50), Expect = 1.4
 Identities = 11/39 (28%), Positives = 19/39 (48%)
 Frame = +1

Query: 58  SKNHTNHNQNRKAHRNGIKKPRKTRHESTLXHGSKIFKE 174
           S N++N+N N  ++ N         + ++L HG    KE
Sbjct: 148 SSNNSNNNNNSSSNNNNNTISSNNNNNNSLHHGPLRDKE 186



 Score = 21.4 bits (43), Expect = 9.9
 Identities = 7/23 (30%), Positives = 11/23 (47%)
 Frame = +1

Query: 70  TNHNQNRKAHRNGIKKPRKTRHE 138
           +N+N N   H   ++    T HE
Sbjct: 169 SNNNNNNSLHHGPLRDKELTEHE 191


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 11/39 (28%), Positives = 18/39 (46%)
 Frame = +1

Query: 58  SKNHTNHNQNRKAHRNGIKKPRKTRHESTLXHGSKIFKE 174
           S N++N+N N   + N         + ++L HG    KE
Sbjct: 196 SSNNSNNNNNSSGNNNNNTISSNNNNNNSLHHGPLRDKE 234



 Score = 21.4 bits (43), Expect = 9.9
 Identities = 7/23 (30%), Positives = 11/23 (47%)
 Frame = +1

Query: 70  TNHNQNRKAHRNGIKKPRKTRHE 138
           +N+N N   H   ++    T HE
Sbjct: 217 SNNNNNNSLHHGPLRDKELTEHE 239


>DQ974170-1|ABJ52810.1|  511|Anopheles gambiae serpin 12 protein.
          Length = 511

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +2

Query: 71  QIITKTAKLTEMVSKSQGRPGTNPPLXMDPKFL 169
           +  T T +   M+ +SQG  G      +D KFL
Sbjct: 318 KFFTNTDERPVMMMRSQGTFGVGKDEQLDAKFL 350


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 287,668
Number of Sequences: 2352
Number of extensions: 4939
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 24935070
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)