Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_D05
(654 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF164152-1|AAD47076.1| 261|Anopheles gambiae ribosomal protein ... 279 7e-77
AY994095-1|AAX86008.1| 144|Anopheles gambiae unknown protein. 27 0.39
AJ439353-4|CAD27926.1| 338|Anopheles gambiae putative hox prote... 25 2.8
AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical prote... 25 2.8
AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical prote... 25 2.8
DQ989013-1|ABK97614.1| 378|Anopheles gambiae gustatory receptor... 24 4.8
CR954257-4|CAJ14155.1| 196|Anopheles gambiae predicted protein ... 23 8.4
AY330177-1|AAQ16283.1| 166|Anopheles gambiae odorant-binding pr... 23 8.4
AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha ... 23 8.4
AJ439060-4|CAD27755.1| 151|Anopheles gambiae putative sRNP prot... 23 8.4
>AF164152-1|AAD47076.1| 261|Anopheles gambiae ribosomal protein L8
protein.
Length = 261
Score = 279 bits (683), Expect = 7e-77
Identities = 124/150 (82%), Positives = 139/150 (92%)
Frame = +1
Query: 205 RGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIV 384
RGAPLAVV+FRDPY+F+ K+LFIA EG+YTGQFVYCG++A L++GNV+P+G MPEGTIV
Sbjct: 54 RGAPLAVVNFRDPYRFRLSKQLFIAAEGMYTGQFVYCGRRAQLQIGNVIPIGLMPEGTIV 113
Query: 385 CNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGG 564
CNLEEK GDRG+LAR SGN+A+VI HNPD KRTRVKLPSGAKKVLPS+NR MVGIVAGGG
Sbjct: 114 CNLEEKTGDRGKLARTSGNYASVIAHNPDTKRTRVKLPSGAKKVLPSANRAMVGIVAGGG 173
Query: 565 RIDKPILKAGRAYHKYKVKRNCWPYVRGVA 654
RIDKPILKAGRAYHKYKVKRNCWP VRGVA
Sbjct: 174 RIDKPILKAGRAYHKYKVKRNCWPKVRGVA 203
Score = 59.7 bits (138), Expect = 8e-11
Identities = 28/32 (87%), Positives = 29/32 (90%)
Frame = +2
Query: 44 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSL 139
MGRVIRAQRKGAGSVF +HTKKRKG PKLR L
Sbjct: 1 MGRVIRAQRKGAGSVFRAHTKKRKGQPKLRHL 32
Score = 42.7 bits (96), Expect = 1e-05
Identities = 20/34 (58%), Positives = 24/34 (70%)
Frame = +3
Query: 102 RRRGKALLNFAL*XYAERHGYIKGVVKDIIHDPG 203
+R+G+ L YAERHGY+KGVVK II DPG
Sbjct: 22 KRKGQPKLRHL--DYAERHGYLKGVVKQIIQDPG 53
>AY994095-1|AAX86008.1| 144|Anopheles gambiae unknown protein.
Length = 144
Score = 27.5 bits (58), Expect = 0.39
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +1
Query: 523 SSNRGMVGIVAGGGRIDKPILKAGRAYHK 609
S+ + +G V GG D IL GRAYH+
Sbjct: 81 SAGQVPLGAVVGGHTSDGEILYVGRAYHE 109
>AJ439353-4|CAD27926.1| 338|Anopheles gambiae putative hox protein
protein.
Length = 338
Score = 24.6 bits (51), Expect = 2.8
Identities = 7/15 (46%), Positives = 13/15 (86%)
Frame = +3
Query: 525 KQQRHGRYCCWRWTY 569
+QQ+HG++CC R ++
Sbjct: 280 QQQQHGQHCCCRGSH 294
>AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 24.6 bits (51), Expect = 2.8
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 153 RHGYIKGVVKDIIHDP 200
R+ +K ++KDI+HDP
Sbjct: 737 RYTMLKDMIKDIMHDP 752
>AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 24.6 bits (51), Expect = 2.8
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +3
Query: 153 RHGYIKGVVKDIIHDP 200
R+ +K ++KDI+HDP
Sbjct: 737 RYTMLKDMIKDIMHDP 752
>DQ989013-1|ABK97614.1| 378|Anopheles gambiae gustatory receptor 24
protein.
Length = 378
Score = 23.8 bits (49), Expect = 4.8
Identities = 14/43 (32%), Positives = 22/43 (51%)
Frame = -1
Query: 426 CQTTSITHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLA 298
C+T SIT + LRH +S ++S +L ++KLA
Sbjct: 180 CETLSITAKILAEDFQRALRHVGPAAKVSEYRSLWL-RLSKLA 221
>CR954257-4|CAJ14155.1| 196|Anopheles gambiae predicted protein
protein.
Length = 196
Score = 23.0 bits (47), Expect = 8.4
Identities = 8/23 (34%), Positives = 13/23 (56%)
Frame = +3
Query: 219 GCCTLPRSIQVQDKEGALHCSRR 287
GCC LP + Q K+ + + + R
Sbjct: 16 GCCALPANTNAQTKQDSSNNNNR 38
>AY330177-1|AAQ16283.1| 166|Anopheles gambiae odorant-binding
protein AgamOBP50 protein.
Length = 166
Score = 23.0 bits (47), Expect = 8.4
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = -1
Query: 318 STINKLACVEPFGSNEELLPCLEL 247
S + KL C+ PF + ++ C +L
Sbjct: 8 SVVGKLTCLSPFLQSIKVASCCQL 31
>AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha 1
chain precursor protein.
Length = 801
Score = 23.0 bits (47), Expect = 8.4
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +3
Query: 198 PG*RCTFGCCTLPRSIQVQDKEG 266
PG CT G C LP+ + G
Sbjct: 84 PGKNCTSGGCCLPKCFAEKGNRG 106
>AJ439060-4|CAD27755.1| 151|Anopheles gambiae putative sRNP
protein.
Length = 151
Score = 23.0 bits (47), Expect = 8.4
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -2
Query: 575 LSIRPPPATIPTM 537
+ +RPPP +PTM
Sbjct: 114 MGMRPPPMMVPTM 126
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 745,743
Number of Sequences: 2352
Number of extensions: 15653
Number of successful extensions: 36
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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