Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_D03
         (348 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   4.8  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   4.8  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    20   6.3  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    20   6.3  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    20   8.3  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 82  VHFHCSMEMTKYDIKNYLEKIYE 150
           +HFH S   +K + K  L K  E
Sbjct: 414 LHFHASWLKSKKEFKEELIKFIE 436


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 20.6 bits (41), Expect = 4.8
 Identities = 9/23 (39%), Positives = 12/23 (52%)
 Frame = +1

Query: 82  VHFHCSMEMTKYDIKNYLEKIYE 150
           +HFH S   +K + K  L K  E
Sbjct: 421 LHFHASWLKSKKEFKEELIKFIE 443


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 64  KQLPNIVHFHCSMEMTKYDIKN 129
           ++ PNI H  CS + T   + N
Sbjct: 9   RESPNIDHNSCSSDDTVLSVGN 30


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 20.2 bits (40), Expect = 6.3
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +2

Query: 8   HNLXYFCRI 34
           +N+ YFCRI
Sbjct: 330 YNILYFCRI 338


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 19.8 bits (39), Expect = 8.3
 Identities = 6/17 (35%), Positives = 12/17 (70%)
 Frame = -3

Query: 193 ISPYLFWSSHPQRVLHK 143
           ++PYLF+ +    +LH+
Sbjct: 118 VNPYLFYYAFSVALLHR 134


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,457
Number of Sequences: 336
Number of extensions: 1251
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  6876025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)