Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_D03
(348 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49254-1|CAA89220.1| 153|Homo sapiens L23-related gene protein. 97 1e-20
U26596-1|AAC50415.1| 153|Homo sapiens ribosomal protein L23-rel... 97 1e-20
BC027710-1|AAH27710.1| 153|Homo sapiens mitochondrial ribosomal... 97 1e-20
BC052988-1|AAH52988.1| 980|Homo sapiens retinoic acid induced 1... 30 1.7
AY317139-1|AAP84319.1| 983|Homo sapiens RAI14 isoform protein. 30 1.7
AF155135-1|AAF44722.1| 980|Homo sapiens novel retinal pigment e... 30 1.7
AB037755-1|BAA92572.1| 989|Homo sapiens KIAA1334 protein protein. 30 1.7
CR456352-1|CAG30238.1| 634|Homo sapiens Em:AC005500.4 protein. 29 4.0
BC015923-1|AAH15923.1| 634|Homo sapiens kelch-like 22 (Drosophi... 29 4.0
AK222850-1|BAD96570.1| 634|Homo sapiens kelch-like variant prot... 29 4.0
AK027266-1|BAB55007.1| 525|Homo sapiens protein ( Homo sapiens ... 29 4.0
BC003542-1|AAH03542.2| 860|Homo sapiens M-phase phosphoprotein,... 29 5.3
AL359457-4|CAI16671.1| 860|Homo sapiens M-phase phosphoprotein,... 29 5.3
AL354808-3|CAI41002.1| 860|Homo sapiens M-phase phosphoprotein,... 29 5.3
>Z49254-1|CAA89220.1| 153|Homo sapiens L23-related gene protein.
Length = 153
Score = 97.5 bits (232), Expect = 1e-20
Identities = 53/114 (46%), Positives = 68/114 (59%), Gaps = 1/114 (0%)
Frame = +1
Query: 1 GNPQLXVFLPNFWMKLVRPHPKQLPNIVHFHCSMEMTKYDIKNYLEKIYEVPVVDVRTKI 180
G PQL VF NF+++LVRP Q + V F MEMT+ D++NYLE IY VPV VRT++
Sbjct: 13 GGPQLRVFRTNFFIQLVRPGVAQPEDTVQFRIPMEMTRVDLRNYLEGIYNVPVAAVRTRV 72
Query: 181 NMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLF-EKSINEEEEHAKSL 339
G K+ + IK+ D KVA+V L TF +PDLF EK + E A L
Sbjct: 73 QHGSNKRRDHRNVRIKKPDYKVAYVQLAHGQTFTFPDLFPEKDESPEGSAADDL 126
>U26596-1|AAC50415.1| 153|Homo sapiens ribosomal protein
L23-related product protein.
Length = 153
Score = 97.5 bits (232), Expect = 1e-20
Identities = 53/114 (46%), Positives = 68/114 (59%), Gaps = 1/114 (0%)
Frame = +1
Query: 1 GNPQLXVFLPNFWMKLVRPHPKQLPNIVHFHCSMEMTKYDIKNYLEKIYEVPVVDVRTKI 180
G PQL VF NF+++LVRP Q + V F MEMT+ D++NYLE IY VPV VRT++
Sbjct: 13 GGPQLRVFRTNFFIQLVRPGVAQPEDTVQFRIPMEMTRVDLRNYLEGIYNVPVAAVRTRV 72
Query: 181 NMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLF-EKSINEEEEHAKSL 339
G K+ + IK+ D KVA+V L TF +PDLF EK + E A L
Sbjct: 73 QHGSNKRRDHRNVRIKKPDYKVAYVQLAHGQTFTFPDLFPEKDESPEGSAADDL 126
>BC027710-1|AAH27710.1| 153|Homo sapiens mitochondrial ribosomal
protein L23 protein.
Length = 153
Score = 97.5 bits (232), Expect = 1e-20
Identities = 53/114 (46%), Positives = 68/114 (59%), Gaps = 1/114 (0%)
Frame = +1
Query: 1 GNPQLXVFLPNFWMKLVRPHPKQLPNIVHFHCSMEMTKYDIKNYLEKIYEVPVVDVRTKI 180
G PQL VF NF+++LVRP Q + V F MEMT+ D++NYLE IY VPV VRT++
Sbjct: 13 GGPQLRVFRTNFFIQLVRPGVAQPEDTVQFRIPMEMTRVDLRNYLEGIYNVPVAAVRTRV 72
Query: 181 NMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLF-EKSINEEEEHAKSL 339
G K+ + IK+ D KVA+V L TF +PDLF EK + E A L
Sbjct: 73 QHGSNKRRDHRNVRIKKPDYKVAYVQLAHGQTFTFPDLFPEKDESPEGSAADDL 126
>BC052988-1|AAH52988.1| 980|Homo sapiens retinoic acid induced 14
protein.
Length = 980
Score = 30.3 bits (65), Expect = 1.7
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 8/106 (7%)
Frame = +1
Query: 40 MKLVRPHPKQLPNIVHFHC------SMEMTKYDIKNYLEKIY--EVPVVDVRTKINMGKF 195
MKL P+ + N HFH + + K D++N LE+ + V ++ K+ + +
Sbjct: 506 MKLGLVSPESMDNYSHFHELRVTEEEINVLKQDLQNALEESERNKEKVRELEEKL-VERE 564
Query: 196 KKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEEHAK 333
K V+K V + +++K ++ ++ + M + LFEK +EE K
Sbjct: 565 KGTVIKPPVEEYEEMKSSYCSVIENMNKEKAFLFEKYQEAQEEIMK 610
>AY317139-1|AAP84319.1| 983|Homo sapiens RAI14 isoform protein.
Length = 983
Score = 30.3 bits (65), Expect = 1.7
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 8/106 (7%)
Frame = +1
Query: 40 MKLVRPHPKQLPNIVHFHC------SMEMTKYDIKNYLEKIY--EVPVVDVRTKINMGKF 195
MKL P+ + N HFH + + K D++N LE+ + V ++ K+ + +
Sbjct: 509 MKLGLVSPESMDNYSHFHELRVTEEEINVLKQDLQNALEESERNKEKVRELEEKL-VERE 567
Query: 196 KKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEEHAK 333
K V+K V + +++K ++ ++ + M + LFEK +EE K
Sbjct: 568 KGTVIKPPVEEYEEMKSSYCSVIENMNKEKAFLFEKYQEAQEEIMK 613
>AF155135-1|AAF44722.1| 980|Homo sapiens novel retinal pigment
epithelial cell protein protein.
Length = 980
Score = 30.3 bits (65), Expect = 1.7
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 8/106 (7%)
Frame = +1
Query: 40 MKLVRPHPKQLPNIVHFHC------SMEMTKYDIKNYLEKIY--EVPVVDVRTKINMGKF 195
MKL P+ + N HFH + + K D++N LE+ + V ++ K+ + +
Sbjct: 506 MKLGLVSPESMDNYSHFHELRVTEEEINVLKQDLQNALEESERNKEKVRELEEKL-VERE 564
Query: 196 KKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEEHAK 333
K V+K V + +++K ++ ++ + M + LFEK +EE K
Sbjct: 565 KGTVIKPPVEEYEEMKSSYCSVIENMNKEKAFLFEKYQEAQEEIMK 610
>AB037755-1|BAA92572.1| 989|Homo sapiens KIAA1334 protein protein.
Length = 989
Score = 30.3 bits (65), Expect = 1.7
Identities = 28/106 (26%), Positives = 53/106 (50%), Gaps = 8/106 (7%)
Frame = +1
Query: 40 MKLVRPHPKQLPNIVHFHC------SMEMTKYDIKNYLEKIY--EVPVVDVRTKINMGKF 195
MKL P+ + N HFH + + K D++N LE+ + V ++ K+ + +
Sbjct: 515 MKLGLVSPESMDNYSHFHELRVTEEEINVLKQDLQNALEESERNKEKVRELEEKL-VERE 573
Query: 196 KKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEEHAK 333
K V+K V + +++K ++ ++ + M + LFEK +EE K
Sbjct: 574 KGTVIKPPVEEYEEMKSSYCSVIENMNKEKAFLFEKYQEAQEEIMK 619
>CR456352-1|CAG30238.1| 634|Homo sapiens Em:AC005500.4 protein.
Length = 634
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 10 QLXVFLPNFWMKLVRPHPKQLPNIVHFHCSMEMTKYDIKNYLE 138
+L + L N LV Q+P I+HF C M+ D +N L+
Sbjct: 112 ELELSLSNVQETLVAACQLQIPEIIHFCCDFLMSWVDEENILD 154
>BC015923-1|AAH15923.1| 634|Homo sapiens kelch-like 22 (Drosophila)
protein.
Length = 634
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 10 QLXVFLPNFWMKLVRPHPKQLPNIVHFHCSMEMTKYDIKNYLE 138
+L + L N LV Q+P I+HF C M+ D +N L+
Sbjct: 112 ELELSLSNVQETLVAACQLQIPEIIHFCCDFLMSWVDEENILD 154
>AK222850-1|BAD96570.1| 634|Homo sapiens kelch-like variant
protein.
Length = 634
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 10 QLXVFLPNFWMKLVRPHPKQLPNIVHFHCSMEMTKYDIKNYLE 138
+L + L N LV Q+P I+HF C M+ D +N L+
Sbjct: 112 ELELSLSNVQETLVAACQLQIPEIIHFCCDFLMSWVDEENILD 154
>AK027266-1|BAB55007.1| 525|Homo sapiens protein ( Homo sapiens
cDNA FLJ14360 fis, clone HEMBA1000488, weakly similar to
RING CANAL PROTEIN. ).
Length = 525
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 10 QLXVFLPNFWMKLVRPHPKQLPNIVHFHCSMEMTKYDIKNYLE 138
+L + L N LV Q+P I+HF C M+ D +N L+
Sbjct: 112 ELELSLSNVQETLVAACQLQIPEIIHFCCDFLMSWVDEENILD 154
>BC003542-1|AAH03542.2| 860|Homo sapiens M-phase phosphoprotein,
mpp8 protein.
Length = 860
Score = 28.7 bits (61), Expect = 5.3
Identities = 21/71 (29%), Positives = 36/71 (50%)
Frame = +1
Query: 133 LEKIYEVPVVDVRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFEKSIN 312
LE E V D+RTK + + K+++ + K+D+VK L K + DL K+
Sbjct: 186 LESSLESLVFDLRTKKRISEAKEELKESKKPKKDEVKET-KELKKVKKGEIRDLKTKTRE 244
Query: 313 EEEEHAKSLXE 345
+ +E+ K+ E
Sbjct: 245 DPKENRKTKKE 255
>AL359457-4|CAI16671.1| 860|Homo sapiens M-phase phosphoprotein,
mpp protein.
Length = 860
Score = 28.7 bits (61), Expect = 5.3
Identities = 21/71 (29%), Positives = 36/71 (50%)
Frame = +1
Query: 133 LEKIYEVPVVDVRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFEKSIN 312
LE E V D+RTK + + K+++ + K+D+VK L K + DL K+
Sbjct: 186 LESSLESLVFDLRTKKRISEAKEELKESKKPKKDEVKET-KELKKVKKGEIRDLKTKTRE 244
Query: 313 EEEEHAKSLXE 345
+ +E+ K+ E
Sbjct: 245 DPKENRKTKKE 255
>AL354808-3|CAI41002.1| 860|Homo sapiens M-phase phosphoprotein,
mpp protein.
Length = 860
Score = 28.7 bits (61), Expect = 5.3
Identities = 21/71 (29%), Positives = 36/71 (50%)
Frame = +1
Query: 133 LEKIYEVPVVDVRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFEKSIN 312
LE E V D+RTK + + K+++ + K+D+VK L K + DL K+
Sbjct: 186 LESSLESLVFDLRTKKRISEAKEELKESKKPKKDEVKET-KELKKVKKGEIRDLKTKTRE 244
Query: 313 EEEEHAKSLXE 345
+ +E+ K+ E
Sbjct: 245 DPKENRKTKKE 255
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,953,972
Number of Sequences: 237096
Number of extensions: 641780
Number of successful extensions: 1017
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1017
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1017
length of database: 76,859,062
effective HSP length: 80
effective length of database: 57,891,382
effective search space used: 2026198370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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