Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_D03
         (348 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071415-1|AAL49037.1|  150|Drosophila melanogaster RE49852p pro...   160   4e-40
AE014296-445|AAF47639.1|  150|Drosophila melanogaster CG1320-PA ...   160   4e-40
BT001385-1|AAN71140.1|  374|Drosophila melanogaster GH03795p pro...    27   4.9  
AE014296-1720|AAF50217.1|  374|Drosophila melanogaster CG18178-P...    27   4.9  

>AY071415-1|AAL49037.1|  150|Drosophila melanogaster RE49852p
           protein.
          Length = 150

 Score =  160 bits (389), Expect = 4e-40
 Identities = 71/116 (61%), Positives = 91/116 (78%)
 Frame = +1

Query: 1   GNPQLXVFLPNFWMKLVRPHPKQLPNIVHFHCSMEMTKYDIKNYLEKIYEVPVVDVRTKI 180
           GNPQL VFLPNFWMKL+RP  +Q PN+V F  SMEMTKYD++NYLEKIY++PVVDVRT+I
Sbjct: 12  GNPQLRVFLPNFWMKLIRPTEEQPPNVVTFSVSMEMTKYDVRNYLEKIYKLPVVDVRTRI 71

Query: 181 NMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEEHAKSLXES 348
            MG+ KKD   GY+ K+DDVK+A+VTLP+  +F +PD F +   ++ +  KSL ES
Sbjct: 72  AMGETKKDQTYGYITKKDDVKLAYVTLPREESFVFPDFFSEKAEKQAKEEKSLDES 127


>AE014296-445|AAF47639.1|  150|Drosophila melanogaster CG1320-PA
           protein.
          Length = 150

 Score =  160 bits (389), Expect = 4e-40
 Identities = 71/116 (61%), Positives = 91/116 (78%)
 Frame = +1

Query: 1   GNPQLXVFLPNFWMKLVRPHPKQLPNIVHFHCSMEMTKYDIKNYLEKIYEVPVVDVRTKI 180
           GNPQL VFLPNFWMKL+RP  +Q PN+V F  SMEMTKYD++NYLEKIY++PVVDVRT+I
Sbjct: 12  GNPQLRVFLPNFWMKLIRPTEEQPPNVVTFSVSMEMTKYDVRNYLEKIYKLPVVDVRTRI 71

Query: 181 NMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEEHAKSLXES 348
            MG+ KKD   GY+ K+DDVK+A+VTLP+  +F +PD F +   ++ +  KSL ES
Sbjct: 72  AMGETKKDQTYGYITKKDDVKLAYVTLPREESFVFPDFFSEKAEKQAKEEKSLDES 127


>BT001385-1|AAN71140.1|  374|Drosophila melanogaster GH03795p
           protein.
          Length = 374

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 15/38 (39%), Positives = 24/38 (63%)
 Frame = +1

Query: 157 VVDVRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKT 270
           +VD ++K +  +  KD+ K  + K+D  K  FV+LPKT
Sbjct: 141 LVDFKSKEDRDQAFKDI-KASIEKDDKHKGLFVSLPKT 177


>AE014296-1720|AAF50217.1|  374|Drosophila melanogaster CG18178-PA
           protein.
          Length = 374

 Score = 27.5 bits (58), Expect = 4.9
 Identities = 15/38 (39%), Positives = 24/38 (63%)
 Frame = +1

Query: 157 VVDVRTKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKT 270
           +VD ++K +  +  KD+ K  + K+D  K  FV+LPKT
Sbjct: 141 LVDFKSKEDRDQAFKDI-KASIEKDDKHKGLFVSLPKT 177


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,654,637
Number of Sequences: 53049
Number of extensions: 206873
Number of successful extensions: 865
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 634
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 865
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 817309116
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)