Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_D03
(348 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000263-4|AAG00016.1| 159|Caenorhabditis elegans Hypothetical ... 87 4e-18
Z81558-3|CAB04541.1| 356|Caenorhabditis elegans Hypothetical pr... 30 0.52
U40948-2|AAA81728.1| 147|Caenorhabditis elegans Ribosomal prote... 29 0.91
Z75542-3|CAA99860.1| 359|Caenorhabditis elegans Hypothetical pr... 29 1.2
U88169-2|AAB42234.1| 342|Caenorhabditis elegans Hypothetical pr... 28 2.1
AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase... 27 2.8
AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase... 27 2.8
AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying de... 27 2.8
AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying de... 27 2.8
Z81109-5|CAB03251.1| 588|Caenorhabditis elegans Hypothetical pr... 27 3.7
Z83317-3|CAB05897.1| 217|Caenorhabditis elegans Hypothetical pr... 27 4.9
Z81529-9|CAB04302.1| 277|Caenorhabditis elegans Hypothetical pr... 27 4.9
AF301606-1|AAG30870.1| 277|Caenorhabditis elegans cadmium-induc... 27 4.9
Z99280-3|CAE18018.1| 215|Caenorhabditis elegans Hypothetical pr... 26 6.4
Z69383-3|CAA93409.1| 261|Caenorhabditis elegans Hypothetical pr... 26 6.4
AF003136-5|AAK21372.1| 203|Caenorhabditis elegans Hypothetical ... 26 6.4
Z82287-3|CAB05313.3| 772|Caenorhabditis elegans Hypothetical pr... 26 8.5
AF040661-18|AAG24217.1| 336|Caenorhabditis elegans Serpentine r... 26 8.5
>AF000263-4|AAG00016.1| 159|Caenorhabditis elegans Hypothetical
protein T08B2.8 protein.
Length = 159
Score = 86.6 bits (205), Expect = 4e-18
Identities = 50/124 (40%), Positives = 74/124 (59%), Gaps = 9/124 (7%)
Frame = +1
Query: 1 GNPQLXVFLPNFWMKLVRPHP---KQLP-NIVHFHCSMEMTKYDIKNYLEKIYEVPVVDV 168
GNPQ VFLP+FWM +V +LP N V F M+++DI+ YL KIY++PV DV
Sbjct: 12 GNPQRRVFLPDFWMAVVESPSVGRNRLPRNCVKFEVDPRMSRHDIREYLTKIYDLPVRDV 71
Query: 169 RTKINMGKF----KKD-VVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEEHAK 333
RT++ MG K D K + K++D K+A+V + K F YP +FE ++ E+ E K
Sbjct: 72 RTEVQMGDITWNSKLDHQYKKAMWKDEDKKIAYVFMSKGFEFSYPQMFE-ALEEDLELVK 130
Query: 334 SLXE 345
++ +
Sbjct: 131 AMKQ 134
>Z81558-3|CAB04541.1| 356|Caenorhabditis elegans Hypothetical
protein F59D12.3 protein.
Length = 356
Score = 29.9 bits (64), Expect = 0.52
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +1
Query: 172 TKINMGKFKKDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEEHAKSL 339
TKIN+GK K V + K++ K AF ++ F+ + FEK + + +S+
Sbjct: 33 TKINLGKVKTTVEAPFKNKKNRKKSAFPNKQRSRFFQTFNRFEKLLRGNYNYLRSI 88
>U40948-2|AAA81728.1| 147|Caenorhabditis elegans Ribosomal protein,
large subunitprotein 25.1 protein.
Length = 147
Score = 29.1 bits (62), Expect = 0.91
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +1
Query: 76 NIVHFHCSMEMTKYDIKNYLEKIYEVPVVDVRTKINMGKFKKDVVK 213
N + F S + KY IK+ + K+Y V + V T I + KK V+
Sbjct: 85 NTLVFIVSNDANKYQIKDAVHKLYNVQALKVNTLITPLQQKKAYVR 130
>Z75542-3|CAA99860.1| 359|Caenorhabditis elegans Hypothetical
protein F55D12.3 protein.
Length = 359
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/66 (27%), Positives = 34/66 (51%)
Frame = +1
Query: 46 LVRPHPKQLPNIVHFHCSMEMTKYDIKNYLEKIYEVPVVDVRTKINMGKFKKDVVKGYVI 225
++ + K+ N + +C TKY Y+E I + V+ ++TK ++ F +VI
Sbjct: 285 ILTEYQKKYSNTLFHYCRTVNTKYGPSRYIEIISLINVI-LKTKSDVDNFSNIF---HVI 340
Query: 226 KEDDVK 243
+ +DVK
Sbjct: 341 QPEDVK 346
>U88169-2|AAB42234.1| 342|Caenorhabditis elegans Hypothetical
protein T03F1.6a protein.
Length = 342
Score = 27.9 bits (59), Expect = 2.1
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +1
Query: 73 PNIVHFHCSMEMTKYDIKNYLEKIYEVPVVDVR 171
PN+ HFHCS+ + D+ + PV R
Sbjct: 290 PNLQHFHCSLPHDEIDLSQEFLALLNEPVRKTR 322
>AF188477-1|AAF01458.1| 1418|Caenorhabditis elegans phospholipase C
beta protein.
Length = 1418
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 163 DVRTKINMGKFKKDVVKGYVIKED 234
DV ++NMGKF+ + GY++K D
Sbjct: 847 DVYMQLNMGKFEYNGGSGYLLKPD 870
>AF179426-1|AAF05701.1| 1431|Caenorhabditis elegans phospholipase C
beta homolog EGL-8 protein.
Length = 1431
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 163 DVRTKINMGKFKKDVVKGYVIKED 234
DV ++NMGKF+ + GY++K D
Sbjct: 848 DVYMQLNMGKFEYNGGSGYLLKPD 871
>AF068714-6|AAL77167.1| 1419|Caenorhabditis elegans Egg laying
defective protein 8,isoform a protein.
Length = 1419
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 163 DVRTKINMGKFKKDVVKGYVIKED 234
DV ++NMGKF+ + GY++K D
Sbjct: 848 DVYMQLNMGKFEYNGGSGYLLKPD 871
>AF068714-5|AAL77168.1| 1431|Caenorhabditis elegans Egg laying
defective protein 8,isoform b protein.
Length = 1431
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/24 (45%), Positives = 17/24 (70%)
Frame = +1
Query: 163 DVRTKINMGKFKKDVVKGYVIKED 234
DV ++NMGKF+ + GY++K D
Sbjct: 848 DVYMQLNMGKFEYNGGSGYLLKPD 871
>Z81109-5|CAB03251.1| 588|Caenorhabditis elegans Hypothetical
protein R10D12.8 protein.
Length = 588
Score = 27.1 bits (57), Expect = 3.7
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = +1
Query: 82 VHFHCSMEMTKYDIKNYLEK 141
+HFHC + TKYD +K
Sbjct: 63 IHFHCLTQNTKYDFFQIFDK 82
>Z83317-3|CAB05897.1| 217|Caenorhabditis elegans Hypothetical
protein F13G11.2 protein.
Length = 217
Score = 26.6 bits (56), Expect = 4.9
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +1
Query: 70 LPNIVHFHCSMEMTKYDIKNYLE 138
+PN FHC+++ K D +NYLE
Sbjct: 27 IPN--QFHCNIKNLKRDAQNYLE 47
>Z81529-9|CAB04302.1| 277|Caenorhabditis elegans Hypothetical
protein F35E8.11 protein.
Length = 277
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 130 YLEKIYEVPVVDVRTKINMGKFKKDVVKGYVIK 228
YL+ + VP + + I+ +KKDVV Y +K
Sbjct: 19 YLKNFFTVPSIKPKPDIHKKDYKKDVVYLYQMK 51
>AF301606-1|AAG30870.1| 277|Caenorhabditis elegans
cadmium-inducible lysosomal proteinCDR-1 protein.
Length = 277
Score = 26.6 bits (56), Expect = 4.9
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +1
Query: 130 YLEKIYEVPVVDVRTKINMGKFKKDVVKGYVIK 228
YL+ + VP + + I+ +KKDVV Y +K
Sbjct: 19 YLKNFFTVPSIKPKPDIHKKDYKKDVVYLYQMK 51
>Z99280-3|CAE18018.1| 215|Caenorhabditis elegans Hypothetical
protein Y57G11B.7 protein.
Length = 215
Score = 26.2 bits (55), Expect = 6.4
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +1
Query: 70 LPNIVHFHCSMEMTKYDIKNYLE 138
+PN H HCS++ D +NYLE
Sbjct: 25 IPN--HLHCSIKNLTRDAQNYLE 45
>Z69383-3|CAA93409.1| 261|Caenorhabditis elegans Hypothetical
protein F13E9.6 protein.
Length = 261
Score = 26.2 bits (55), Expect = 6.4
Identities = 13/47 (27%), Positives = 27/47 (57%)
Frame = +1
Query: 97 SMEMTKYDIKNYLEKIYEVPVVDVRTKINMGKFKKDVVKGYVIKEDD 237
+ + K+++K + K YEV +++ K+N ++ ++ YVIK D
Sbjct: 37 NQKRVKFEVKTKVGKKYEVRTLEILQKLNKSGKQEWIL--YVIKYSD 81
>AF003136-5|AAK21372.1| 203|Caenorhabditis elegans Hypothetical
protein F28B3.4 protein.
Length = 203
Score = 26.2 bits (55), Expect = 6.4
Identities = 19/79 (24%), Positives = 35/79 (44%)
Frame = +1
Query: 25 LPNFWMKLVRPHPKQLPNIVHFHCSMEMTKYDIKNYLEKIYEVPVVDVRTKINMGKFKKD 204
L N W+ L+ HP +P + CS+ + + + L + ++ +++ G K
Sbjct: 19 LNNSWLFLLVLHPFDIPLYISKSCSLLLQIMNDPDTLPDEVREKLAELDLELSEGDITK- 77
Query: 205 VVKGYVIKEDDVKVAFVTL 261
KGY K D + F +L
Sbjct: 78 --KGYDKKRDALLAPFKSL 94
>Z82287-3|CAB05313.3| 772|Caenorhabditis elegans Hypothetical
protein ZK550.3 protein.
Length = 772
Score = 25.8 bits (54), Expect = 8.5
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +1
Query: 199 KDVVKGYVIKEDDVKVAFVTLPKTMTFKYPDLFEKSINEEEEHAK 333
++VV+ + +E +V AF TL M +PD K + + H K
Sbjct: 123 ENVVEPLLTEEYEVNFAFQTLVLKMLTDWPDCNRKLFDADLHHIK 167
>AF040661-18|AAG24217.1| 336|Caenorhabditis elegans Serpentine
receptor, class h protein60 protein.
Length = 336
Score = 25.8 bits (54), Expect = 8.5
Identities = 9/30 (30%), Positives = 15/30 (50%)
Frame = +1
Query: 73 PNIVHFHCSMEMTKYDIKNYLEKIYEVPVV 162
PN+++ C T +D +YL Y V +
Sbjct: 4 PNLINSTCRENYTYFDSSDYLRNAYHVTAI 33
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,739,679
Number of Sequences: 27780
Number of extensions: 114626
Number of successful extensions: 320
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 318
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 461821634
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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