Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_D01
(507 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450 monoo... 31 0.009
DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450 monoo... 21 7.3
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 21 7.3
AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropi... 21 7.3
AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein. 21 7.3
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 21 9.7
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 21 9.7
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 21 9.7
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 21 9.7
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 21 9.7
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 21 9.7
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 21 9.7
AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase... 21 9.7
>DQ244075-1|ABB36785.1| 548|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 548
Score = 30.7 bits (66), Expect = 0.009
Identities = 24/99 (24%), Positives = 45/99 (45%), Gaps = 4/99 (4%)
Frame = +3
Query: 195 PGPWGLPIVGYLPFIDRY-HPHITLTNLSK---TYGAIYGLKMGSIYAVVLSDHKLVRDA 362
PGP LP++G +D + P + + K + + + +G + L D + V
Sbjct: 45 PGPPALPLIGNA--LDLFGSPDAMFSQVLKKAENFKDVVKIWVGPKLVICLIDPRDVEII 102
Query: 363 FSKDSFSGRAPLYLTHGLMNGNGIICAEGGLWRDXRKLI 479
S + + ++ Y G+G++ + G WR+ RKLI
Sbjct: 103 LSSNVYIDKSTEYRFFKPWLGDGLLISTGQKWRNHRKLI 141
>DQ244074-1|ABB36784.1| 517|Apis mellifera cytochrome P450
monooxygenase protein.
Length = 517
Score = 21.0 bits (42), Expect = 7.3
Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +3
Query: 93 LYLSSNMDLYFIWLVT-FVAGFWIFKKIKEWQNLPPGPWGLPIVG 224
++++S+ ++ W T A K K +P GP+ LPI G
Sbjct: 20 IFVTSHRPAWWFWTATSHEASAPAEGKFKTVSKVP-GPFSLPIFG 63
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 21.0 bits (42), Expect = 7.3
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = -2
Query: 359 ISYKFMIR*HYSIYAAHFETV 297
+SY ++R HYS+ + + T+
Sbjct: 233 LSYNILLRRHYSMNSTTYVTL 253
Score = 21.0 bits (42), Expect = 7.3
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +2
Query: 368 KRQFFWTSTSLLNTW 412
K+Q+ W TS+L W
Sbjct: 385 KKQYTWRHTSVLIGW 399
>AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropin
releasing hormone-binding protein protein.
Length = 332
Score = 21.0 bits (42), Expect = 7.3
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -2
Query: 206 PRSGGQILPFLYFFENPKP 150
P+SG F F +NP+P
Sbjct: 176 PKSGKGFSLFARFLKNPRP 194
>AB022908-1|BAA86909.1| 493|Apis mellifera amylase protein.
Length = 493
Score = 21.0 bits (42), Expect = 7.3
Identities = 5/10 (50%), Positives = 8/10 (80%)
Frame = +2
Query: 416 YEWKWNYLCR 445
+EWKWN + +
Sbjct: 37 FEWKWNDIAK 46
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 20.6 bits (41), Expect = 9.7
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 205 GGYLSSVICLSLIAI 249
GG LSSV+ LSL ++
Sbjct: 13 GGRLSSVLSLSLTSL 27
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 20.6 bits (41), Expect = 9.7
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 205 GGYLSSVICLSLIAI 249
GG LSSV+ LSL ++
Sbjct: 13 GGRLSSVLSLSLTSL 27
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 20.6 bits (41), Expect = 9.7
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 205 GGYLSSVICLSLIAI 249
GG LSSV+ LSL ++
Sbjct: 13 GGRLSSVLSLSLTSL 27
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 20.6 bits (41), Expect = 9.7
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = +1
Query: 205 GGYLSSVICLSLIAI 249
GG LSSV+ LSL ++
Sbjct: 13 GGRLSSVLSLSLTSL 27
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 20.6 bits (41), Expect = 9.7
Identities = 6/15 (40%), Positives = 11/15 (73%)
Frame = +1
Query: 205 GGYLSSVICLSLIAI 249
GGYL + CL+++ +
Sbjct: 379 GGYLLGIQCLTVVCL 393
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 20.6 bits (41), Expect = 9.7
Identities = 8/26 (30%), Positives = 17/26 (65%)
Frame = +2
Query: 29 IPIIGLYYIWLTRFNDTQLISTVSIK 106
+P+I +Y + + + ND+ ++S V K
Sbjct: 788 LPMIPVYCVPVPQVNDSTILSPVREK 813
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 20.6 bits (41), Expect = 9.7
Identities = 8/17 (47%), Positives = 12/17 (70%)
Frame = -1
Query: 387 VQKNCLLRTHLLQVYDQ 337
+Q N + +THLLQ D+
Sbjct: 153 LQLNVIQQTHLLQTADK 169
>AB204558-1|BAD89803.1| 1143|Apis mellifera nitric oxide synthase
protein.
Length = 1143
Score = 20.6 bits (41), Expect = 9.7
Identities = 5/12 (41%), Positives = 10/12 (83%)
Frame = -2
Query: 149 SHERYQPNKIKV 114
+H+RY PN +++
Sbjct: 805 AHDRYLPNSLRI 816
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,475
Number of Sequences: 438
Number of extensions: 4064
Number of successful extensions: 14
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13986774
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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