Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_C19
(601 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex det... 28 0.061
DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex det... 26 0.32
DQ494417-1|ABF55368.1| 42|Apis mellifera telomerase reverse tr... 25 0.43
DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex det... 24 0.99
DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex det... 24 0.99
DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex det... 24 0.99
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 24 0.99
DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex det... 23 2.3
U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive o... 22 4.0
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 22 4.0
AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin ... 22 4.0
AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive... 21 9.2
>DQ325082-1|ABD14096.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 28.3 bits (60), Expect = 0.061
Identities = 9/22 (40%), Positives = 16/22 (72%)
Frame = -1
Query: 589 ITNKTYNSKSSHKYEYTNKCFK 524
++NKT ++ +++KY Y N C K
Sbjct: 85 LSNKTIHNNNNYKYNYNNNCKK 106
>DQ325083-1|ABD14097.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 25.8 bits (54), Expect = 0.32
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = -1
Query: 589 ITNKTYNSKSSHKYEYTNK 533
++NKT ++ +++KY Y NK
Sbjct: 85 LSNKTIHNNNNYKYNYNNK 103
>DQ494417-1|ABF55368.1| 42|Apis mellifera telomerase reverse
transcriptase protein.
Length = 42
Score = 25.4 bits (53), Expect = 0.43
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -3
Query: 191 MKHFLFRKLKWNFRYCFKQYCEFYQVFFK 105
M +F + LK +F F+QYC +++ K
Sbjct: 2 MDNFTLQSLKKDFGTYFQQYCLHHKILIK 30
>DQ325080-1|ABD14094.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 24.2 bits (50), Expect = 0.99
Identities = 7/23 (30%), Positives = 16/23 (69%)
Frame = -1
Query: 589 ITNKTYNSKSSHKYEYTNKCFKS 521
++NKT ++ +++KY Y N + +
Sbjct: 85 LSNKTIHNNNNYKYNYNNNNYNN 107
>DQ325079-1|ABD14093.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 24.2 bits (50), Expect = 0.99
Identities = 7/23 (30%), Positives = 16/23 (69%)
Frame = -1
Query: 589 ITNKTYNSKSSHKYEYTNKCFKS 521
++NKT ++ +++KY Y N + +
Sbjct: 85 LSNKTIHNNNNYKYNYNNNNYNN 107
>DQ325078-1|ABD14092.1| 184|Apis mellifera complementary sex
determiner protein.
Length = 184
Score = 24.2 bits (50), Expect = 0.99
Identities = 7/23 (30%), Positives = 16/23 (69%)
Frame = -1
Query: 589 ITNKTYNSKSSHKYEYTNKCFKS 521
++NKT ++ +++KY Y N + +
Sbjct: 85 LSNKTIHNNNNYKYNYNNNNYNN 107
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 24.2 bits (50), Expect = 0.99
Identities = 7/23 (30%), Positives = 16/23 (69%)
Frame = -1
Query: 589 ITNKTYNSKSSHKYEYTNKCFKS 521
++NKT ++ +++KY Y N + +
Sbjct: 318 LSNKTIHNNNNYKYNYNNNNYNN 340
>DQ325081-1|ABD14095.1| 186|Apis mellifera complementary sex
determiner protein.
Length = 186
Score = 23.0 bits (47), Expect = 2.3
Identities = 6/23 (26%), Positives = 16/23 (69%)
Frame = -1
Query: 589 ITNKTYNSKSSHKYEYTNKCFKS 521
++N+T ++ +++KY Y N + +
Sbjct: 85 LSNRTIHNNNNYKYNYNNNNYNN 107
>U70841-1|AAC47455.1| 377|Apis mellifera ultraviolet sensitive
opsin protein.
Length = 377
Score = 22.2 bits (45), Expect = 4.0
Identities = 7/28 (25%), Positives = 17/28 (60%)
Frame = +3
Query: 444 LRESLDTRILSTCTFNLLKIMRMVYLLL 527
L + DT++ TC F ++ +++++L
Sbjct: 211 LTDDEDTKVFVTCIFIWAYVIPLIFIIL 238
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 22.2 bits (45), Expect = 4.0
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +3
Query: 444 LRESLDTRILSTC 482
+RESLDT+ L C
Sbjct: 334 IRESLDTQFLQVC 346
>AF004168-1|AAC13417.1| 377|Apis mellifera blue-sensitive opsin
protein.
Length = 377
Score = 22.2 bits (45), Expect = 4.0
Identities = 7/28 (25%), Positives = 17/28 (60%)
Frame = +3
Query: 444 LRESLDTRILSTCTFNLLKIMRMVYLLL 527
L + DT++ TC F ++ +++++L
Sbjct: 211 LTDDEDTKVFVTCIFIWAYVIPLIFIIL 238
>AF004169-1|AAC13418.1| 371|Apis mellifera ultraviolet-sensitive
opsin protein.
Length = 371
Score = 21.0 bits (42), Expect = 9.2
Identities = 7/27 (25%), Positives = 16/27 (59%)
Frame = +3
Query: 471 LSTCTFNLLKIMRMVYLLLKHLFVYSY 551
L++C+F+ L + + + +F +SY
Sbjct: 194 LTSCSFDYLTDTNEIRIFVATIFTFSY 220
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,053
Number of Sequences: 438
Number of extensions: 2875
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17604432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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