Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_C18
         (489 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U57847-1|AAB02266.1|   84|Homo sapiens ribosomal protein S27 pro...   165   5e-41
L19739-1|AAA59867.1|   84|Homo sapiens metallopanstimulin protein.    165   5e-41
BC070219-1|AAH70219.1|   84|Homo sapiens ribosomal protein S27 (...   165   5e-41
BC002658-1|AAH02658.1|   84|Homo sapiens ribosomal protein S27 (...   165   5e-41
AL358472-19|CAI14033.1|   84|Homo sapiens ribosomal protein S27 ...   165   5e-41
AB061845-1|BAB79483.1|   84|Homo sapiens ribosomal protein S27 p...   165   5e-41
BC003667-1|AAH03667.1|   84|Homo sapiens ribosomal protein S27-l...   160   3e-39
BC047648-1|AAH47648.1|  113|Homo sapiens RPS27L protein protein.      142   6e-34
AB007162-1|BAA25825.1|   69|Homo sapiens ribosomal protein S27 p...   135   7e-32
AL358472-18|CAI14032.1|   66|Homo sapiens ribosomal protein S27 ...    73   4e-13

>U57847-1|AAB02266.1|   84|Homo sapiens ribosomal protein S27
           protein.
          Length = 84

 Score =  165 bits (402), Expect = 5e-41
 Identities = 72/84 (85%), Positives = 76/84 (90%)
 Frame = +1

Query: 40  MPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCS 219
           MPLA DLLHPSP  E+RKHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCS
Sbjct: 1   MPLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCS 60

Query: 220 TILCQPTGGRARLTEGCSFRRKQH 291
           T+LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 61  TVLCQPTGGKARLTEGCSFRRKQH 84


>L19739-1|AAA59867.1|   84|Homo sapiens metallopanstimulin protein.
          Length = 84

 Score =  165 bits (402), Expect = 5e-41
 Identities = 72/84 (85%), Positives = 76/84 (90%)
 Frame = +1

Query: 40  MPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCS 219
           MPLA DLLHPSP  E+RKHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCS
Sbjct: 1   MPLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCS 60

Query: 220 TILCQPTGGRARLTEGCSFRRKQH 291
           T+LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 61  TVLCQPTGGKARLTEGCSFRRKQH 84


>BC070219-1|AAH70219.1|   84|Homo sapiens ribosomal protein S27
           (metallopanstimulin 1) protein.
          Length = 84

 Score =  165 bits (402), Expect = 5e-41
 Identities = 72/84 (85%), Positives = 76/84 (90%)
 Frame = +1

Query: 40  MPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCS 219
           MPLA DLLHPSP  E+RKHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCS
Sbjct: 1   MPLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCS 60

Query: 220 TILCQPTGGRARLTEGCSFRRKQH 291
           T+LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 61  TVLCQPTGGKARLTEGCSFRRKQH 84


>BC002658-1|AAH02658.1|   84|Homo sapiens ribosomal protein S27
           (metallopanstimulin 1) protein.
          Length = 84

 Score =  165 bits (402), Expect = 5e-41
 Identities = 72/84 (85%), Positives = 76/84 (90%)
 Frame = +1

Query: 40  MPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCS 219
           MPLA DLLHPSP  E+RKHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCS
Sbjct: 1   MPLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCS 60

Query: 220 TILCQPTGGRARLTEGCSFRRKQH 291
           T+LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 61  TVLCQPTGGKARLTEGCSFRRKQH 84


>AL358472-19|CAI14033.1|   84|Homo sapiens ribosomal protein S27
           (metallopanstimulin 1) protein.
          Length = 84

 Score =  165 bits (402), Expect = 5e-41
 Identities = 72/84 (85%), Positives = 76/84 (90%)
 Frame = +1

Query: 40  MPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCS 219
           MPLA DLLHPSP  E+RKHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCS
Sbjct: 1   MPLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCS 60

Query: 220 TILCQPTGGRARLTEGCSFRRKQH 291
           T+LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 61  TVLCQPTGGKARLTEGCSFRRKQH 84


>AB061845-1|BAB79483.1|   84|Homo sapiens ribosomal protein S27
           protein.
          Length = 84

 Score =  165 bits (402), Expect = 5e-41
 Identities = 72/84 (85%), Positives = 76/84 (90%)
 Frame = +1

Query: 40  MPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCS 219
           MPLA DLLHPSP  E+RKHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCS
Sbjct: 1   MPLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCS 60

Query: 220 TILCQPTGGRARLTEGCSFRRKQH 291
           T+LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 61  TVLCQPTGGKARLTEGCSFRRKQH 84


>BC003667-1|AAH03667.1|   84|Homo sapiens ribosomal protein S27-like
           protein.
          Length = 84

 Score =  160 bits (388), Expect = 3e-39
 Identities = 70/84 (83%), Positives = 75/84 (89%)
 Frame = +1

Query: 40  MPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCS 219
           MPLA DLLHPS   E++KHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCS
Sbjct: 1   MPLARDLLHPSLEEEKKKHKEKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCS 60

Query: 220 TILCQPTGGRARLTEGCSFRRKQH 291
           T+LCQPTGG+ARLTEGCSFRRKQH
Sbjct: 61  TVLCQPTGGKARLTEGCSFRRKQH 84


>BC047648-1|AAH47648.1|  113|Homo sapiens RPS27L protein protein.
          Length = 113

 Score =  142 bits (344), Expect = 6e-34
 Identities = 65/91 (71%), Positives = 72/91 (79%)
 Frame = +1

Query: 4   CWLFRLCIKAVTMPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFS 183
           C L  + I    + LA DLLHPS   E++KHK KRLV  PNSYFMDVKCPGCYKITTVFS
Sbjct: 5   CGLKLIVIICFFVQLARDLLHPSLEEEKKKHKKKRLVQSPNSYFMDVKCPGCYKITTVFS 64

Query: 184 HAQRVVVCAGCSTILCQPTGGRARLTEGCSF 276
           HAQ VV+C GCST+LCQPTGG+ARLTEG SF
Sbjct: 65  HAQTVVLCVGCSTVLCQPTGGKARLTEGISF 95


>AB007162-1|BAA25825.1|   69|Homo sapiens ribosomal protein S27
           protein.
          Length = 69

 Score =  135 bits (327), Expect = 7e-32
 Identities = 58/69 (84%), Positives = 62/69 (89%)
 Frame = +1

Query: 55  DLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPGCYKITTVFSHAQRVVVCAGCSTILCQ 234
           DLLHPSP  E+RKHK KRLV  PNSYFMDVKCPGCYKITTVFSHAQ VV+C GCST+LCQ
Sbjct: 1   DLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQ 60

Query: 235 PTGGRARLT 261
           PTGG+ARLT
Sbjct: 61  PTGGKARLT 69


>AL358472-18|CAI14032.1|   66|Homo sapiens ribosomal protein S27
           (metallopanstimulin 1) protein.
          Length = 66

 Score = 73.3 bits (172), Expect = 4e-13
 Identities = 32/39 (82%), Positives = 33/39 (84%)
 Frame = +1

Query: 40  MPLAIDLLHPSPASERRKHKLKRLVPHPNSYFMDVKCPG 156
           MPLA DLLHPSP  E+RKHK KRLV  PNSYFMDVKCPG
Sbjct: 1   MPLAKDLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPG 39


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,225,520
Number of Sequences: 237096
Number of extensions: 1233034
Number of successful extensions: 3063
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3017
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3063
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4366354454
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)