Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_C17
(357 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P39019 Cluster: 40S ribosomal protein S19; n=127; Eukar... 83 1e-15
UniRef50_P40978 Cluster: 40S ribosomal protein S19; n=201; cellu... 80 1e-14
UniRef50_Q54X51 Cluster: 40S ribosomal protein S19; n=1; Dictyos... 71 6e-12
UniRef50_Q2M3Z3 Cluster: Ribosomal protein S19; n=1; Phytophthor... 67 7e-11
UniRef50_Q6V579 Cluster: Ribosomal protein S19S; n=4; Ascaridida... 62 2e-09
UniRef50_Q5D941 Cluster: SJCHGC06232 protein; n=2; Schistosoma j... 62 2e-09
UniRef50_P58234 Cluster: 40S ribosomal protein S19-A; n=19; Dika... 62 3e-09
UniRef50_Q5KQL3 Cluster: Putative ribosomal protein S19; n=1; Or... 60 1e-08
UniRef50_Q7XYZ1 Cluster: Putative 40S ribosomal protein S19; n=1... 57 1e-07
UniRef50_Q4MYX5 Cluster: 40S ribosomal protein S19, putative; n=... 57 1e-07
UniRef50_O15631 Cluster: 40S ribosomal protein S19; n=3; Entamoe... 50 1e-05
UniRef50_Q5CSY3 Cluster: 40S ribosomal protein S19; n=2; Cryptos... 49 2e-05
UniRef50_Q4Q2R6 Cluster: 40S ribosomal protein S19 protein, puta... 49 3e-05
UniRef50_A0CH22 Cluster: Chromosome undetermined scaffold_18, wh... 49 3e-05
UniRef50_UPI0000DA3B01 Cluster: PREDICTED: similar to 40S riboso... 48 4e-05
UniRef50_O27653 Cluster: 30S ribosomal protein S19e; n=12; Eurya... 44 6e-04
UniRef50_UPI00006D00E1 Cluster: Ribosomal protein S19e containin... 44 8e-04
UniRef50_A7I9J1 Cluster: Ribosomal protein S19e; n=1; Candidatus... 42 0.004
UniRef50_A7AM94 Cluster: 40S ribosomal protein S19, putative; n=... 41 0.007
UniRef50_A2EN51 Cluster: Ribosomal protein S19e, putative; n=4; ... 39 0.022
UniRef50_Q7RHC7 Cluster: Ribosomal protein S19e, putative; n=5; ... 38 0.067
UniRef50_Q4WJN7 Cluster: 40S ribosomal protein S19; n=3; Ascomyc... 38 0.067
UniRef50_Q9YD22 Cluster: 30S ribosomal protein S19e; n=18; Archa... 37 0.12
UniRef50_Q9AW29 Cluster: 40S ribosomal protein S19; n=1; Guillar... 36 0.16
UniRef50_O28210 Cluster: 30S ribosomal protein S19e; n=2; Euryar... 36 0.27
UniRef50_UPI00001CA3A8 Cluster: PREDICTED: similar to 40S riboso... 35 0.36
UniRef50_Q97CU4 Cluster: 30S ribosomal protein S19e; n=4; Thermo... 33 1.5
UniRef50_Q4RMM9 Cluster: Chromosome 10 SCAF15019, whole genome s... 32 3.4
UniRef50_A0JWK7 Cluster: Erythromycin esterase; n=3; Actinomycet... 32 3.4
UniRef50_Q54SX1 Cluster: Putative uncharacterized protein; n=1; ... 32 3.4
UniRef50_A7DPW7 Cluster: Ribosomal protein S19e; n=1; Candidatus... 31 7.7
>UniRef50_P39019 Cluster: 40S ribosomal protein S19; n=127;
Eukaryota|Rep: 40S ribosomal protein S19 - Homo sapiens
(Human)
Length = 145
Score = 83.0 bits (196), Expect = 1e-15
Identities = 46/95 (48%), Positives = 60/95 (63%)
Frame = +1
Query: 31 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPX*PXIGSMCVVLP 210
M VTVKDV Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAP
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAPYDENWFYTRAAST 60
Query: 211 SFVIFTFAHLXGVKTVTKIFGGRKRNGVTPSHFCR 315
+ ++ GV ++TKI+GGR+RNGV PSHF R
Sbjct: 61 ARHLYLRGG-AGVGSMTKIYGGRQRNGVMPSHFSR 94
>UniRef50_P40978 Cluster: 40S ribosomal protein S19; n=201; cellular
organisms|Rep: 40S ribosomal protein S19 - Oryza sativa
subsp. japonica (Rice)
Length = 146
Score = 79.8 bits (188), Expect = 1e-14
Identities = 42/91 (46%), Positives = 57/91 (62%)
Frame = +1
Query: 43 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPX*PXIGSMCVVLPSFVI 222
TVKDV + VK +AHLK++GK+++PE +D+VKTARFKEL P P + I
Sbjct: 8 TVKDVNPHEFVKAYSAHLKRSGKMELPEWVDIVKTARFKELPPYDPDWYYTRAASIARKI 67
Query: 223 FTFAHLXGVKTVTKIFGGRKRNGVTPSHFCR 315
+ + GV KI+GGR+RNG P HFC+
Sbjct: 68 YLRQGI-GVGGFQKIYGGRQRNGSRPPHFCK 97
>UniRef50_Q54X51 Cluster: 40S ribosomal protein S19; n=1;
Dictyostelium discoideum AX4|Rep: 40S ribosomal protein
S19 - Dictyostelium discoideum AX4
Length = 148
Score = 70.9 bits (166), Expect = 6e-12
Identities = 43/109 (39%), Positives = 60/109 (55%), Gaps = 4/109 (3%)
Frame = +1
Query: 37 SVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPX*PX-IGSMCVVLPS 213
+VT+KDV + + T A LKKTG+V++P+ D+ KTA ++EL P P I L
Sbjct: 5 AVTLKDVCPQEFIATYARFLKKTGRVQIPKWNDIAKTATYRELPPTNPDWIYYRIATLAR 64
Query: 214 FVIFTFAHLXGVKTVTKIFGGRKRNGVTPSHFCRVIR---QYCTQXLCN 351
V GV T ++FGG +RNGV P+HF V +YC + L N
Sbjct: 65 KVYIRGG--DGVATYRRVFGGNRRNGVRPNHFADVNGGNIRYCLKQLQN 111
>UniRef50_Q2M3Z3 Cluster: Ribosomal protein S19; n=1; Phytophthora
infestans|Rep: Ribosomal protein S19 - Phytophthora
infestans (Potato late blight fungus)
Length = 154
Score = 67.3 bits (157), Expect = 7e-11
Identities = 34/93 (36%), Positives = 54/93 (58%)
Frame = +1
Query: 31 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPX*PXIGSMCVVLP 210
+R VTV+DV+ + +K A HLK++GK+++P D+VKTA FKE +P P +
Sbjct: 10 VRGVTVRDVKPAEFIKAYAEHLKRSGKIELPAWWDVVKTASFKEYSPADPDWYYIRAASI 69
Query: 211 SFVIFTFAHLXGVKTVTKIFGGRKRNGVTPSHF 309
+ ++ GV ++ K++GG R GV HF
Sbjct: 70 ARKVY-LRQYTGVGSLKKVYGGAARKGVHRQHF 101
>UniRef50_Q6V579 Cluster: Ribosomal protein S19S; n=4;
Ascarididae|Rep: Ribosomal protein S19S - Parascaris
univalens
Length = 128
Score = 62.5 bits (145), Expect = 2e-09
Identities = 34/87 (39%), Positives = 50/87 (57%)
Frame = +1
Query: 55 VEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPX*PXIGSMCVVLPSFVIFTFA 234
++Q +IV+ +A LKK+GKVKVPE DLVK KELAP + + ++
Sbjct: 10 IDQHEIVRQIAGFLKKSGKVKVPEWSDLVKLGITKELAPVDSDWYYVRTASVARRLY-IR 68
Query: 235 HLXGVKTVTKIFGGRKRNGVTPSHFCR 315
GV + +++G KR GVTP+HF +
Sbjct: 69 SPTGVGALRRVYGSNKRRGVTPNHFAK 95
>UniRef50_Q5D941 Cluster: SJCHGC06232 protein; n=2; Schistosoma
japonicum|Rep: SJCHGC06232 protein - Schistosoma
japonicum (Blood fluke)
Length = 142
Score = 62.5 bits (145), Expect = 2e-09
Identities = 36/92 (39%), Positives = 51/92 (55%)
Frame = +1
Query: 31 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPX*PXIGSMCVVLP 210
M V+VKDV+ VK +A LKKTGKV++P+ D+VK + +LAP P V
Sbjct: 1 MAPVSVKDVDGHVFVKALAQFLKKTGKVRLPDWTDVVKLSSANQLAPYNP--DWFYVRCA 58
Query: 211 SFVIFTFAHLXGVKTVTKIFGGRKRNGVTPSH 306
+ + + G+ + K F +KRNGV PSH
Sbjct: 59 AILRHLYIRPTGLTGLCKAFSRKKRNGVKPSH 90
>UniRef50_P58234 Cluster: 40S ribosomal protein S19-A; n=19;
Dikarya|Rep: 40S ribosomal protein S19-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 144
Score = 62.1 bits (144), Expect = 3e-09
Identities = 34/92 (36%), Positives = 51/92 (55%)
Frame = +1
Query: 31 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPX*PXIGSMCVVLP 210
M V+VKDV+ K + AA LK++GK+ P+ +D+VKT KELAP P +
Sbjct: 1 MAGVSVKDVDAQKFITAYAAFLKRSGKMTTPQWIDIVKTGTHKELAPYDPDWYYVRAAAI 60
Query: 211 SFVIFTFAHLXGVKTVTKIFGGRKRNGVTPSH 306
+ I+ + GV + K++GG G+ PSH
Sbjct: 61 ARHIYLRKQV-GVGRLCKVYGGSVNRGMRPSH 91
>UniRef50_Q5KQL3 Cluster: Putative ribosomal protein S19; n=1; Oryza
sativa (japonica cultivar-group)|Rep: Putative ribosomal
protein S19 - Oryza sativa subsp. japonica (Rice)
Length = 166
Score = 60.1 bits (139), Expect = 1e-08
Identities = 42/111 (37%), Positives = 57/111 (51%), Gaps = 20/111 (18%)
Frame = +1
Query: 43 TVKDVEQDKIVKTVAAHLKKTGKV--------------------KVPEHMDLVKTARFKE 162
TVKDV + VK +AHLK++GK+ ++PE +D+VKTARFKE
Sbjct: 8 TVKDVNPHEFVKAYSAHLKRSGKLFVASQELLLLGNLRISFYQMELPEWVDIVKTARFKE 67
Query: 163 LAPX*PXIGSMCVVLPSFVIFTFAHLXGVKTVTKIFGGRKRNGVTPSHFCR 315
L P P + I+ + GV KI+GGR+RNG P HFC+
Sbjct: 68 LPPYDPDWYYTRAASIARKIYLRQGI-GVGGFQKIYGGRQRNGSRPPHFCK 117
>UniRef50_Q7XYZ1 Cluster: Putative 40S ribosomal protein S19; n=1;
Griffithsia japonica|Rep: Putative 40S ribosomal protein
S19 - Griffithsia japonica (Red alga)
Length = 150
Score = 56.8 bits (131), Expect = 1e-07
Identities = 31/86 (36%), Positives = 48/86 (55%)
Frame = +1
Query: 43 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPX*PXIGSMCVVLPSFVI 222
TVKDV + V T A+HLK+ G +++P +D +KTA +ELAP P + + + +
Sbjct: 12 TVKDVPAAEFVNTYASHLKRVGMIEIPPWVDTIKTAASRELAPYDPDWLYIRIASIARKL 71
Query: 223 FTFAHLXGVKTVTKIFGGRKRNGVTP 300
+ + G KI+G RKR G+ P
Sbjct: 72 YIRGGI-GTGEFRKIYGDRKRRGMKP 96
>UniRef50_Q4MYX5 Cluster: 40S ribosomal protein S19, putative; n=2;
Theileria|Rep: 40S ribosomal protein S19, putative -
Theileria parva
Length = 169
Score = 56.8 bits (131), Expect = 1e-07
Identities = 31/93 (33%), Positives = 48/93 (51%)
Frame = +1
Query: 37 SVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPX*PXIGSMCVVLPSF 216
+ ++KD D VK A H+K G ++ P+ +D KT+ KELAP P +
Sbjct: 25 NTSLKDCNPDLFVKAFAEHMKLKGYLECPKRLDYAKTSVAKELAPQDPDWFYIRAAAVLR 84
Query: 217 VIFTFAHLXGVKTVTKIFGGRKRNGVTPSHFCR 315
++ F GV + K++ +KRNG P+H CR
Sbjct: 85 HLY-FHPDSGVDRLRKVYSSKKRNGSAPNHTCR 116
>UniRef50_O15631 Cluster: 40S ribosomal protein S19; n=3; Entamoeba
histolytica|Rep: 40S ribosomal protein S19 - Entamoeba
histolytica
Length = 148
Score = 50.0 bits (114), Expect = 1e-05
Identities = 23/45 (51%), Positives = 30/45 (66%)
Frame = +1
Query: 46 VKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPX*P 180
+KDV +K A HLKK+GK+++PE +D VKT KELAP P
Sbjct: 7 IKDVVAIDFIKAYAEHLKKSGKLEIPEWVDTVKTGMCKELAPLNP 51
>UniRef50_Q5CSY3 Cluster: 40S ribosomal protein S19; n=2;
Cryptosporidium|Rep: 40S ribosomal protein S19 -
Cryptosporidium parvum Iowa II
Length = 154
Score = 49.2 bits (112), Expect = 2e-05
Identities = 35/103 (33%), Positives = 53/103 (51%), Gaps = 6/103 (5%)
Frame = +1
Query: 43 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPX*PXIGSMCVVLPSFVI 222
T KDV +++ A LKK GK+ +PE +D VKTA KEL P S + + + I
Sbjct: 18 TAKDVPAGILIEKFAQQLKKGGKMTMPEWVDHVKTASSKELPPQ----NSDWLYIRAASI 73
Query: 223 FTFAHL---XGVKTVTKIFGGRKRNGVTPSHFC---RVIRQYC 333
++ GV ++K +G ++RNG +H R I +YC
Sbjct: 74 LRHLYVRPNVGVGALSKFYGRKQRNGTARNHSAVASRGIIRYC 116
>UniRef50_Q4Q2R6 Cluster: 40S ribosomal protein S19 protein,
putative; n=9; Trypanosomatidae|Rep: 40S ribosomal
protein S19 protein, putative - Leishmania major
Length = 172
Score = 48.8 bits (111), Expect = 3e-05
Identities = 29/94 (30%), Positives = 47/94 (50%)
Frame = +1
Query: 25 GKMRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPX*PXIGSMCVV 204
GK + T+KDV + +KT A H K+ GK+ VP +++K++ +E AP P +
Sbjct: 24 GKRKGATLKDVSAWRWIKTAARHFKQEGKIFVPNCTEIMKSSHGRERAPQNPDWYYIRCA 83
Query: 205 LPSFVIFTFAHLXGVKTVTKIFGGRKRNGVTPSH 306
I+ + G ++K FG +K G P H
Sbjct: 84 AVLRAIYLRPGV-GYGGLSKRFGNKKNYGSRPEH 116
>UniRef50_A0CH22 Cluster: Chromosome undetermined scaffold_18, whole
genome shotgun sequence; n=8; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_18,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 197
Score = 48.8 bits (111), Expect = 3e-05
Identities = 35/101 (34%), Positives = 48/101 (47%)
Frame = +1
Query: 43 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPX*PXIGSMCVVLPSFVI 222
TVKDV ++ A +LKK K+K+PE +VKT KE +P + + I
Sbjct: 57 TVKDVPAQDFIRGYAEYLKKNNKIKIPEWASIVKTGLGKETSPIDQDWMYVRAAALARKI 116
Query: 223 FTFAHLXGVKTVTKIFGGRKRNGVTPSHFCRVIRQYCTQXL 345
+ H GV +T +FG NG S +VIR Y Q L
Sbjct: 117 YVRGH-WGVGNLTHMFGSVNDNGKHESGSGKVIR-YLLQQL 155
>UniRef50_UPI0000DA3B01 Cluster: PREDICTED: similar to 40S ribosomal
protein S19; n=3; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S19 - Rattus norvegicus
Length = 268
Score = 48.4 bits (110), Expect = 4e-05
Identities = 22/37 (59%), Positives = 29/37 (78%)
Frame = +1
Query: 61 QDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAP 171
Q + V+ +AA LKK+GK+KVPE +D VK A+ KELAP
Sbjct: 156 QQEFVRALAAFLKKSGKLKVPEWVDTVKLAKHKELAP 192
>UniRef50_O27653 Cluster: 30S ribosomal protein S19e; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S19e -
Methanobacterium thermoautotrophicum
Length = 145
Score = 44.4 bits (100), Expect = 6e-04
Identities = 30/91 (32%), Positives = 42/91 (46%)
Frame = +1
Query: 43 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPX*PXIGSMCVVLPSFVI 222
TV DV D ++ VA LK KVK PE ++ VKT KE P P + +
Sbjct: 3 TVYDVPADLLINRVAEELKNDSKVKSPEWVNFVKTGVHKERRPENPDWWYVRAAALLRRV 62
Query: 223 FTFAHLXGVKTVTKIFGGRKRNGVTPSHFCR 315
+ + GV ++ +GG+K G P F R
Sbjct: 63 YIDGPV-GVNSLRTHYGGKKDRGSRPEKFRR 92
>UniRef50_UPI00006D00E1 Cluster: Ribosomal protein S19e containing
protein; n=1; Tetrahymena thermophila SB210|Rep:
Ribosomal protein S19e containing protein - Tetrahymena
thermophila SB210
Length = 155
Score = 44.0 bits (99), Expect = 8e-04
Identities = 26/83 (31%), Positives = 39/83 (46%)
Frame = +1
Query: 43 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPX*PXIGSMCVVLPSFVI 222
TVKDV ++ A+HLKK K+ +PE T+ +ELAP + + +
Sbjct: 9 TVKDVAAADFIREYASHLKKANKLSIPEFTQWTTTSVARELAPQDSDWVYIRTAALARKV 68
Query: 223 FTFAHLXGVKTVTKIFGGRKRNG 291
+ H G+ T+ IFG K G
Sbjct: 69 YLKPH-TGISTLKHIFGSNKDRG 90
>UniRef50_A7I9J1 Cluster: Ribosomal protein S19e; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S19e -
Methanoregula boonei (strain 6A8)
Length = 199
Score = 41.5 bits (93), Expect = 0.004
Identities = 27/89 (30%), Positives = 39/89 (43%)
Frame = +1
Query: 43 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPX*PXIGSMCVVLPSFVI 222
TV DV D +++ VA LKK ++K P KT KE+ P P +
Sbjct: 3 TVYDVPADHLIRKVAEELKKRQEIKPPAWAAFAKTGVHKEMPPEDPDWWFTRAAAVLRRV 62
Query: 223 FTFAHLXGVKTVTKIFGGRKRNGVTPSHF 309
+ L GV+ + +GG K G P+ F
Sbjct: 63 YVDGPL-GVERMRSFYGGSKNRGSKPNAF 90
>UniRef50_A7AM94 Cluster: 40S ribosomal protein S19, putative; n=1;
Babesia bovis|Rep: 40S ribosomal protein S19, putative -
Babesia bovis
Length = 171
Score = 40.7 bits (91), Expect = 0.007
Identities = 25/95 (26%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Frame = +1
Query: 37 SVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPX*P---XIGSMCVVL 207
+ ++ D + D + A ++ + P+ +D VKT+ KELAP P I S ++
Sbjct: 25 NTSLNDCQPDVFIAAFAQQMELKNYIDPPKWIDYVKTSCAKELAPQDPKWFYIRSAAILR 84
Query: 208 PSFVIFTFAHLXGVKTVTKIFGGRKRNGVTPSHFC 312
+ F G+ + +++ RKR G P+H C
Sbjct: 85 HLY----FHPDEGIGRLRRVYASRKRRGCAPNHTC 115
Score = 31.9 bits (69), Expect = 3.4
Identities = 11/14 (78%), Positives = 13/14 (92%)
Frame = +3
Query: 186 WFYVRCAAILRHIY 227
WFY+R AAILRH+Y
Sbjct: 74 WFYIRSAAILRHLY 87
>UniRef50_A2EN51 Cluster: Ribosomal protein S19e, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S19e,
putative - Trichomonas vaginalis G3
Length = 148
Score = 39.1 bits (87), Expect = 0.022
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +1
Query: 49 KDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAP 171
+++ D +V +A H + T ++ PE DLVKTA K+LAP
Sbjct: 14 REIAADVLVNALAKHYQDTQVIRNPEWADLVKTASLKQLAP 54
>UniRef50_Q7RHC7 Cluster: Ribosomal protein S19e, putative; n=5;
Plasmodium|Rep: Ribosomal protein S19e, putative -
Plasmodium yoelii yoelii
Length = 193
Score = 37.5 bits (83), Expect = 0.067
Identities = 24/88 (27%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = +1
Query: 46 VKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPX*PXIGSMCVVLPSFVIF 225
+KDV+ + + A +LK K+ P+ + VKT + ++LAP + S +
Sbjct: 50 IKDVDAELFISAYAKYLKLHNKITFPKWCNFVKTGKGRKLAPL--DEDWYFIKTSSILRR 107
Query: 226 TFAHL-XGVKTVTKIFGGRKRNGVTPSH 306
+ H GV + + F ++R GV P+H
Sbjct: 108 LYIHPDIGVGFLRRQFSYKQRRGVAPNH 135
>UniRef50_Q4WJN7 Cluster: 40S ribosomal protein S19; n=3;
Ascomycota|Rep: 40S ribosomal protein S19 - Aspergillus
fumigatus (Sartorya fumigata)
Length = 221
Score = 37.5 bits (83), Expect = 0.067
Identities = 26/94 (27%), Positives = 44/94 (46%), Gaps = 3/94 (3%)
Frame = +1
Query: 34 RSVTVKDVE---QDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPX*PXIGSMCVV 204
+++ ++DVE K + +A LK+ GK+ +P +D VKT+ EL P +
Sbjct: 73 QNLQIEDVEILTAQKFIAAYSAFLKRQGKLPIPGWVDTVKTSCSNELPPQDSDWYYVRAA 132
Query: 205 LPSFVIFTFAHLXGVKTVTKIFGGRKRNGVTPSH 306
+ I+ GV + K+ G K G P+H
Sbjct: 133 AVARHIY-MRKTVGVGRLRKVHGSTKNRGSRPNH 165
Score = 32.3 bits (70), Expect = 2.5
Identities = 11/16 (68%), Positives = 14/16 (87%)
Frame = +3
Query: 186 WFYVRCAAILRHIYIR 233
W+YVR AA+ RHIY+R
Sbjct: 126 WYYVRAAAVARHIYMR 141
>UniRef50_Q9YD22 Cluster: 30S ribosomal protein S19e; n=18;
Archaea|Rep: 30S ribosomal protein S19e - Aeropyrum
pernix
Length = 153
Score = 36.7 bits (81), Expect = 0.12
Identities = 26/91 (28%), Positives = 38/91 (41%), Gaps = 1/91 (1%)
Frame = +1
Query: 40 VTVKDVEQDKIVKTVAAHLK-KTGKVKVPEHMDLVKTARFKELAPX*PXIGSMCVVLPSF 216
V +V D +++ VA LK K +VK P KT KE P +
Sbjct: 2 VNALEVPADLLIRRVARKLKEKYPQVKPPAWAYFAKTGPHKERPPTDRDWWYVRAASILR 61
Query: 217 VIFTFAHLXGVKTVTKIFGGRKRNGVTPSHF 309
++ G++T I+GGR+ G P HF
Sbjct: 62 KLYKSPEPIGIETFRTIYGGRQNRGSAPEHF 92
>UniRef50_Q9AW29 Cluster: 40S ribosomal protein S19; n=1; Guillardia
theta|Rep: 40S ribosomal protein S19 - Guillardia theta
(Cryptomonas phi)
Length = 143
Score = 36.3 bits (80), Expect = 0.16
Identities = 18/82 (21%), Positives = 43/82 (52%), Gaps = 2/82 (2%)
Frame = +1
Query: 46 VKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPX*P--XIGSMCVVLPSFV 219
+KD+ +D + A L+K+G++ +P +++ K++ K+ +P M ++ F
Sbjct: 5 LKDIPKDVFINYYAEFLEKSGQINIPSWIEICKSSSLKKYSPNQSNWIFKRMASIIIKFY 64
Query: 220 IFTFAHLXGVKTVTKIFGGRKR 285
I+ G + + +I+ G+K+
Sbjct: 65 IY---KKLGTRQLVRIYNGKKK 83
>UniRef50_O28210 Cluster: 30S ribosomal protein S19e; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S19e -
Archaeoglobus fulgidus
Length = 147
Score = 35.5 bits (78), Expect = 0.27
Identities = 28/89 (31%), Positives = 40/89 (44%)
Frame = +1
Query: 43 TVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPX*PXIGSMCVVLPSFVI 222
TV DV D ++K VA LK V PE VKT KE +P + + +
Sbjct: 3 TVYDVPADLLIKRVAERLKDM--VAPPEWAKYVKTGVHKERSPEQDDWWYLRLASIFRRV 60
Query: 223 FTFAHLXGVKTVTKIFGGRKRNGVTPSHF 309
+ + G++ + +GGRKR G P F
Sbjct: 61 YIDGPV-GIERLRTFYGGRKRRGSKPPKF 88
>UniRef50_UPI00001CA3A8 Cluster: PREDICTED: similar to 40S ribosomal
protein S19; n=1; Rattus norvegicus|Rep: PREDICTED:
similar to 40S ribosomal protein S19 - Rattus norvegicus
Length = 131
Score = 35.1 bits (77), Expect = 0.36
Identities = 34/96 (35%), Positives = 42/96 (43%), Gaps = 1/96 (1%)
Frame = +1
Query: 31 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKT-ARFKELAPX*PXIGSMCVVL 207
M VTVKDV Q + V+ +AA LKK+ VK+ EL P S+ VV
Sbjct: 1 MPGVTVKDVNQQEFVRALAAFLKKSPNGWTQSSWPNVKSLPHTHELLPQHSNCTSV-VVR 59
Query: 208 PSFVIFTFAHLXGVKTVTKIFGGRKRNGVTPSHFCR 315
V + GR+RNGV PSHF R
Sbjct: 60 GKGVGMLVPRPRSTED-----RGRQRNGVRPSHFNR 90
>UniRef50_Q97CU4 Cluster: 30S ribosomal protein S19e; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S19e -
Thermoplasma volcanium
Length = 150
Score = 33.1 bits (72), Expect = 1.5
Identities = 17/44 (38%), Positives = 24/44 (54%)
Frame = +1
Query: 40 VTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAP 171
V+VK V D ++ V+ LK+ K+K P + VKT KE P
Sbjct: 2 VSVKYVPSDMLINYVSGKLKEEKKIKEPNWVKFVKTGVSKEKPP 45
>UniRef50_Q4RMM9 Cluster: Chromosome 10 SCAF15019, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 10 SCAF15019, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 1378
Score = 31.9 bits (69), Expect = 3.4
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Frame = -1
Query: 336 RAILPDDPAEM*RCNSITFAPTKDL---GDSLDSXQVSECKY-DEGWQHNAHRTNXGSXR 169
+ LPD M CN+ +F P K++ + L ++ Y + WQ NAHR
Sbjct: 100 KVTLPDAFLPMDVCNAWSFIPDKNMVCCPEQLLRVILAHIHYMPDHWQGNAHRYETRDQF 159
Query: 168 SQLFEASCLYKIHVL 124
SQLF+ ++ + L
Sbjct: 160 SQLFQYKAVFILEEL 174
>UniRef50_A0JWK7 Cluster: Erythromycin esterase; n=3;
Actinomycetales|Rep: Erythromycin esterase -
Arthrobacter sp. (strain FB24)
Length = 443
Score = 31.9 bits (69), Expect = 3.4
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +1
Query: 4 FFRLSTQGKMRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELA 168
++R+ QG S V+D+ V ++AHL K + EH V AR ++A
Sbjct: 245 YYRIMVQGSRESWNVRDLHMADTVDRLSAHLGPASKGIIWEHNTHVGDARATDMA 299
>UniRef50_Q54SX1 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 951
Score = 31.9 bits (69), Expect = 3.4
Identities = 19/58 (32%), Positives = 32/58 (55%)
Frame = -1
Query: 228 CKYDEGWQHNAHRTNXGSXRSQLFEASCLYKIHVLRYLDFARFF*VSSDSFNNLVLFN 55
C ++ G +++ H+ RSQLF AS + + YL+ F +SSD F+N+ +N
Sbjct: 752 CSFESGEEYHHHKHE--ESRSQLF-ASIWVNNYSIVYLNLENFPFLSSDFFSNINQYN 806
>UniRef50_A7DPW7 Cluster: Ribosomal protein S19e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
S19e - Candidatus Nitrosopumilus maritimus SCM1
Length = 150
Score = 30.7 bits (66), Expect = 7.7
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +3
Query: 186 WFYVRCAAILRHIYIRSPXWSQDCHQD 266
W++ RCA+I+R IY+ P + +D
Sbjct: 49 WWHTRCASIMRKIYLHGPIGINELRKD 75
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 328,534,487
Number of Sequences: 1657284
Number of extensions: 5563190
Number of successful extensions: 13773
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 13432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13744
length of database: 575,637,011
effective HSP length: 90
effective length of database: 426,481,451
effective search space used: 11941480628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -