Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_C17
         (357 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   2.9  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    20   6.6  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    20   6.6  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    20   6.6  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    20   6.6  
AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory recept...    20   6.6  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    20   8.7  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       20   8.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    20   8.7  

>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 2.9
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 4   FFRLSTQGKMRSVTVKDVEQD 66
           +FRL+T+G  R V   D   D
Sbjct: 42  YFRLTTEGDCRDVVRCDKNSD 62


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 20.2 bits (40), Expect = 6.6
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 293 TPLRLRPPKILVT 255
           T +R+RPPK+  T
Sbjct: 79  TTVRVRPPKVYPT 91


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 20.2 bits (40), Expect = 6.6
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 293 TPLRLRPPKILVT 255
           T +R+RPPK+  T
Sbjct: 393 TTVRVRPPKVYPT 405


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 20.2 bits (40), Expect = 6.6
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 293 TPLRLRPPKILVT 255
           T +R+RPPK+  T
Sbjct: 626 TTVRVRPPKVYPT 638


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 20.2 bits (40), Expect = 6.6
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 293 TPLRLRPPKILVT 255
           T +R+RPPK+  T
Sbjct: 626 TTVRVRPPKVYPT 638


>AM292352-1|CAL23164.1|  250|Tribolium castaneum gustatory receptor
           candidate 31 protein.
          Length = 250

 Score = 20.2 bits (40), Expect = 6.6
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = -1

Query: 99  F*VSSDSFNNLVLFNIL 49
           F VSS S+N  VLF+ L
Sbjct: 230 FSVSSSSYNCEVLFSFL 246


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin
          deacetylase 2B protein.
          Length = 528

 Score = 19.8 bits (39), Expect = 8.7
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +1

Query: 4  FFRLSTQGKMRSV 42
          +FRL+T+G  R V
Sbjct: 42 YFRLTTEGDCRDV 54


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 19.8 bits (39), Expect = 8.7
 Identities = 7/24 (29%), Positives = 11/24 (45%)
 Frame = -1

Query: 276 PTKDLGDSLDSXQVSECKYDEGWQ 205
           P ++ G  +D     EC    GW+
Sbjct: 114 PCRNNGSCVDRIADFECNCKNGWK 137


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 19.8 bits (39), Expect = 8.7
 Identities = 10/30 (33%), Positives = 14/30 (46%)
 Frame = -1

Query: 294 NSITFAPTKDLGDSLDSXQVSECKYDEGWQ 205
           N    AP ++ G  LD      CK  +G+Q
Sbjct: 186 NECDSAPCQNGGTCLDLIGSYSCKCPKGFQ 215


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,307
Number of Sequences: 336
Number of extensions: 1499
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7193380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)