Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_C17
(357 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118868-1|AAM50728.1| 156|Drosophila melanogaster GM26647p pro... 101 2e-22
AF216206-1|AAF65682.1| 156|Drosophila melanogaster ribosomal pr... 101 2e-22
AE014298-2436|AAN09413.1| 156|Drosophila melanogaster CG4464-PC... 101 2e-22
AE014298-2435|AAN09412.1| 156|Drosophila melanogaster CG4464-PB... 101 2e-22
AE014298-2434|AAF48633.1| 156|Drosophila melanogaster CG4464-PA... 101 2e-22
X73153-1|CAA51677.1| 156|Drosophila melanogaster ribosomal prot... 101 3e-22
AY119257-1|AAM51117.1| 155|Drosophila melanogaster SD22440p pro... 72 2e-13
AE014297-3411|AAN13960.1| 155|Drosophila melanogaster CG5338-PB... 72 2e-13
BT012454-1|AAS93725.1| 902|Drosophila melanogaster RE64461p pro... 27 5.3
AF145672-1|AAD38647.1| 1189|Drosophila melanogaster BcDNA.GH1217... 27 5.3
AE013599-184|AAF57363.1| 1688|Drosophila melanogaster CG3274-PA ... 27 5.3
>AY118868-1|AAM50728.1| 156|Drosophila melanogaster GM26647p
protein.
Length = 156
Score = 101 bits (243), Expect = 2e-22
Identities = 53/97 (54%), Positives = 66/97 (68%), Gaps = 2/97 (2%)
Frame = +1
Query: 31 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPX*PXIGSMCVVLP 210
M VTVKD++Q + K VA LKKTGK+KVP+ MD+VKTA+FKELAP P V
Sbjct: 1 MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDP---DWFYVRC 57
Query: 211 SFVIFTFAHL--XGVKTVTKIFGGRKRNGVTPSHFCR 315
+ ++ H GV ++TKI+GGRKRNGV PSHFCR
Sbjct: 58 ASILRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCR 94
>AF216206-1|AAF65682.1| 156|Drosophila melanogaster ribosomal
protein S19 protein.
Length = 156
Score = 101 bits (243), Expect = 2e-22
Identities = 53/97 (54%), Positives = 66/97 (68%), Gaps = 2/97 (2%)
Frame = +1
Query: 31 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPX*PXIGSMCVVLP 210
M VTVKD++Q + K VA LKKTGK+KVP+ MD+VKTA+FKELAP P V
Sbjct: 1 MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDP---DWFYVRC 57
Query: 211 SFVIFTFAHL--XGVKTVTKIFGGRKRNGVTPSHFCR 315
+ ++ H GV ++TKI+GGRKRNGV PSHFCR
Sbjct: 58 ASILRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCR 94
>AE014298-2436|AAN09413.1| 156|Drosophila melanogaster CG4464-PC,
isoform C protein.
Length = 156
Score = 101 bits (243), Expect = 2e-22
Identities = 53/97 (54%), Positives = 66/97 (68%), Gaps = 2/97 (2%)
Frame = +1
Query: 31 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPX*PXIGSMCVVLP 210
M VTVKD++Q + K VA LKKTGK+KVP+ MD+VKTA+FKELAP P V
Sbjct: 1 MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDP---DWFYVRC 57
Query: 211 SFVIFTFAHL--XGVKTVTKIFGGRKRNGVTPSHFCR 315
+ ++ H GV ++TKI+GGRKRNGV PSHFCR
Sbjct: 58 ASILRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCR 94
>AE014298-2435|AAN09412.1| 156|Drosophila melanogaster CG4464-PB,
isoform B protein.
Length = 156
Score = 101 bits (243), Expect = 2e-22
Identities = 53/97 (54%), Positives = 66/97 (68%), Gaps = 2/97 (2%)
Frame = +1
Query: 31 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPX*PXIGSMCVVLP 210
M VTVKD++Q + K VA LKKTGK+KVP+ MD+VKTA+FKELAP P V
Sbjct: 1 MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDP---DWFYVRC 57
Query: 211 SFVIFTFAHL--XGVKTVTKIFGGRKRNGVTPSHFCR 315
+ ++ H GV ++TKI+GGRKRNGV PSHFCR
Sbjct: 58 ASILRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCR 94
>AE014298-2434|AAF48633.1| 156|Drosophila melanogaster CG4464-PA,
isoform A protein.
Length = 156
Score = 101 bits (243), Expect = 2e-22
Identities = 53/97 (54%), Positives = 66/97 (68%), Gaps = 2/97 (2%)
Frame = +1
Query: 31 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPX*PXIGSMCVVLP 210
M VTVKD++Q + K VA LKKTGK+KVP+ MD+VKTA+FKELAP P V
Sbjct: 1 MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDP---DWFYVRC 57
Query: 211 SFVIFTFAHL--XGVKTVTKIFGGRKRNGVTPSHFCR 315
+ ++ H GV ++TKI+GGRKRNGV PSHFCR
Sbjct: 58 ASILRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCR 94
>X73153-1|CAA51677.1| 156|Drosophila melanogaster ribosomal protein
S19 protein.
Length = 156
Score = 101 bits (242), Expect = 3e-22
Identities = 52/97 (53%), Positives = 66/97 (68%), Gaps = 2/97 (2%)
Frame = +1
Query: 31 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAPX*PXIGSMCVVLP 210
M VTVKD++Q + K VA LKKTGK+KVP+ MD++KTA+FKELAP P V
Sbjct: 1 MPGVTVKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIIKTAKFKELAPYDP---DWFYVRC 57
Query: 211 SFVIFTFAHL--XGVKTVTKIFGGRKRNGVTPSHFCR 315
+ ++ H GV ++TKI+GGRKRNGV PSHFCR
Sbjct: 58 ASILRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCR 94
>AY119257-1|AAM51117.1| 155|Drosophila melanogaster SD22440p
protein.
Length = 155
Score = 72.1 bits (169), Expect = 2e-13
Identities = 40/96 (41%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Frame = +1
Query: 31 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAP-X*PXIGSMCVVL 207
M VTVK+++Q + K +AA LKK+GK+ VPE +KT +FKE AP + C +
Sbjct: 1 MPGVTVKEIDQHVLTKNMAAFLKKSGKIFVPEQAVYMKTGKFKETAPTDDDWFYTRCASI 60
Query: 208 PSFVIFTFAHLXGVKTVTKIFGGRKRNGVTPSHFCR 315
+ GV TK++ GRKRNGV PS CR
Sbjct: 61 MRHLYLRSP--AGVGAFTKVYSGRKRNGVRPSKHCR 94
>AE014297-3411|AAN13960.1| 155|Drosophila melanogaster CG5338-PB
protein.
Length = 155
Score = 72.1 bits (169), Expect = 2e-13
Identities = 40/96 (41%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Frame = +1
Query: 31 MRSVTVKDVEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTARFKELAP-X*PXIGSMCVVL 207
M VTVK+++Q + K +AA LKK+GK+ VPE +KT +FKE AP + C +
Sbjct: 1 MPGVTVKEIDQHVLTKNMAAFLKKSGKIFVPEQAVYMKTGKFKETAPTDDDWFYTRCASI 60
Query: 208 PSFVIFTFAHLXGVKTVTKIFGGRKRNGVTPSHFCR 315
+ GV TK++ GRKRNGV PS CR
Sbjct: 61 MRHLYLRSP--AGVGAFTKVYSGRKRNGVRPSKHCR 94
>BT012454-1|AAS93725.1| 902|Drosophila melanogaster RE64461p
protein.
Length = 902
Score = 27.5 bits (58), Expect = 5.3
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 55 VEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTAR 153
VEQ ++ + +H +K GK+ V HM + R
Sbjct: 699 VEQAELYRIYLSHCQKAGKLSVVNHMQFPRLVR 731
>AF145672-1|AAD38647.1| 1189|Drosophila melanogaster BcDNA.GH12174
protein.
Length = 1189
Score = 27.5 bits (58), Expect = 5.3
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 55 VEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTAR 153
VEQ ++ + +H +K GK+ V HM + R
Sbjct: 200 VEQAELYRIYLSHCQKAGKLSVVNHMQFPRLVR 232
>AE013599-184|AAF57363.1| 1688|Drosophila melanogaster CG3274-PA
protein.
Length = 1688
Score = 27.5 bits (58), Expect = 5.3
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +1
Query: 55 VEQDKIVKTVAAHLKKTGKVKVPEHMDLVKTAR 153
VEQ ++ + +H +K GK+ V HM + R
Sbjct: 699 VEQAELYRIYLSHCQKAGKLSVVNHMQFPRLVR 731
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,204,991
Number of Sequences: 53049
Number of extensions: 271589
Number of successful extensions: 683
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 667
length of database: 24,988,368
effective HSP length: 76
effective length of database: 20,956,644
effective search space used: 880179048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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