Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_C15
         (655 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    22   3.8  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    22   5.1  
AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor su...    22   5.1  
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   6.7  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   8.9  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   8.9  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   8.9  

>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/32 (28%), Positives = 20/32 (62%)
 Frame = +3

Query: 375 KRELERVKQDLISRKVAIQTLEPVVLELNLAD 470
           +RE+E+ K+DL S      T+E ++ + + ++
Sbjct: 91  RREVEKAKRDLSSVHKTTLTIENLLADYDFSE 122


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = -3

Query: 410 YQILFNSFEFSFP 372
           Y  LFN FEFS P
Sbjct: 354 YPHLFNFFEFSVP 366


>AF025669-1|AAB81523.1|  243|Tribolium castaneum GABA receptor
           subunit protein.
          Length = 243

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
 Frame = +3

Query: 186 YIGVPFVVGVTMYGV-INHLLQKKRRSTL 269
           Y G P  VGVTMY + I+ L + K   TL
Sbjct: 60  YGGPPVEVGVTMYVLSISSLSEVKMDFTL 88


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +3

Query: 336 YGQGCKIILASRRKRELERVKQDL 407
           YG  C+I +  RRK +  R+K+ L
Sbjct: 226 YGNNCEIDMYMRRKCQECRLKKCL 249


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 114 LYLLYYFCICS 82
           L+LL+ FC CS
Sbjct: 293 LFLLFVFCDCS 303


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 114 LYLLYYFCICS 82
           L+LL+ FC CS
Sbjct: 293 LFLLFVFCDCS 303


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 114 LYLLYYFCICS 82
           L+LL+ FC CS
Sbjct: 293 LFLLFVFCDCS 303


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,724
Number of Sequences: 336
Number of extensions: 4093
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)