Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_C15
(655 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY217747-1|AAP45005.1| 246|Apis mellifera short-chain dehydroge... 53 3e-09
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 26 0.37
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 26 0.37
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 22 6.0
DQ435331-1|ABD92646.1| 135|Apis mellifera OBP14 protein. 22 6.0
AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor typ... 22 6.0
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 22 6.0
DQ435337-1|ABD92652.1| 135|Apis mellifera OBP20 protein. 21 7.9
DQ435336-1|ABD92651.1| 135|Apis mellifera OBP19 protein. 21 7.9
AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 21 7.9
AB095514-1|BAC76336.1| 72|Apis mellifera ecdyson receptor prot... 21 7.9
>AY217747-1|AAP45005.1| 246|Apis mellifera short-chain
dehydrogenase/reductase protein.
Length = 246
Score = 52.8 bits (121), Expect = 3e-09
Identities = 35/125 (28%), Positives = 68/125 (54%)
Frame = +3
Query: 276 KVVLITGASSGIGEALAHVFYGQGCKIILASRRKRELERVKQDLISRKVAIQTLEPVVLE 455
+V L+TGA+SGIG+ L G+G K+I + + +++ + ++L S+ + V L+
Sbjct: 8 EVALVTGANSGIGKCLIECLVGKGMKVIGIAPQVDKMKTLVEELKSKPGKL-----VPLQ 62
Query: 456 LNLADIDNMYLFVEKVYGICGHVDILVNNGGVTHRGSILNTKTDVDQKIMFINYFGSVAL 635
+L++ +++ +E V G +DIL+NN + ++ N + +KI IN G +
Sbjct: 63 CDLSNQNDILKVIEWVEKNLGAIDILINNATINIDVTLQNDEVLDWKKIFDINLLGLTCM 122
Query: 636 TKAVL 650
+ VL
Sbjct: 123 IQEVL 127
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 25.8 bits (54), Expect = 0.37
Identities = 27/112 (24%), Positives = 44/112 (39%), Gaps = 4/112 (3%)
Frame = +3
Query: 327 HVFYGQGCKIILASRRKRELERVKQDLISRKVAIQTLEPVVLELNLADIDNMYLFVEKVY 506
HV+ GC I+ + + R + L+S V +Q VV L + + + + V
Sbjct: 1520 HVWPDNGCPILYFTIQYRPINEFHWTLVSNSVKMQR-RFVVTNLQPSSVYQLKVETHNVA 1578
Query: 507 GICGHVDI----LVNNGGVTHRGSILNTKTDVDQKIMFINYFGSVALTKAVL 650
G + L G ++ RG D K+M +VAL AV+
Sbjct: 1579 G-SNQAEFTFVTLTKEGELSKRGIASTVPFYADVKVMLPLIVATVALVVAVV 1629
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 25.8 bits (54), Expect = 0.37
Identities = 27/112 (24%), Positives = 44/112 (39%), Gaps = 4/112 (3%)
Frame = +3
Query: 327 HVFYGQGCKIILASRRKRELERVKQDLISRKVAIQTLEPVVLELNLADIDNMYLFVEKVY 506
HV+ GC I+ + + R + L+S V +Q VV L + + + + V
Sbjct: 1516 HVWPDNGCPILYFTIQYRPINEFHWTLVSNSVKMQR-RFVVTNLQPSSVYQLKVETHNVA 1574
Query: 507 GICGHVDI----LVNNGGVTHRGSILNTKTDVDQKIMFINYFGSVALTKAVL 650
G + L G ++ RG D K+M +VAL AV+
Sbjct: 1575 G-SNQAEFTFVTLTKEGELSKRGIASTVPFYADVKVMLPLIVATVALVVAVV 1625
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.8 bits (44), Expect = 6.0
Identities = 14/29 (48%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Frame = +3
Query: 186 YIGVPFVVGVTMYGV-INHLLQKKRRSTL 269
Y G P VGVTMY + I+ L + K TL
Sbjct: 31 YGGPPVEVGVTMYVLSISSLSEVKMDFTL 59
>DQ435331-1|ABD92646.1| 135|Apis mellifera OBP14 protein.
Length = 135
Score = 21.8 bits (44), Expect = 6.0
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = -2
Query: 120 KTLYLLYYFCIC 85
KT+ L++ FC+C
Sbjct: 2 KTIVLIFGFCVC 13
>AF498306-5|AAM19330.1| 456|Apis mellifera dopamine receptor type
D2 protein.
Length = 456
Score = 21.8 bits (44), Expect = 6.0
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +1
Query: 364 LLGGKENSKELNRI*YPGKLPSKLLNQ 444
LLG +E +LNR Y P + +Q
Sbjct: 8 LLGSEEEGNQLNRSFYSASYPPQNRSQ 34
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -3
Query: 386 EFSFPPRSKDN 354
E FPPRSK N
Sbjct: 425 ELGFPPRSKKN 435
>DQ435337-1|ABD92652.1| 135|Apis mellifera OBP20 protein.
Length = 135
Score = 21.4 bits (43), Expect = 7.9
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = -2
Query: 120 KTLYLLYYFCIC 85
KT+ +++ FCIC
Sbjct: 2 KTIVVIFAFCIC 13
>DQ435336-1|ABD92651.1| 135|Apis mellifera OBP19 protein.
Length = 135
Score = 21.4 bits (43), Expect = 7.9
Identities = 6/12 (50%), Positives = 10/12 (83%)
Frame = -2
Query: 120 KTLYLLYYFCIC 85
KT+ +++ FCIC
Sbjct: 2 KTIVVIFAFCIC 13
>AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A
isoform protein.
Length = 567
Score = 21.4 bits (43), Expect = 7.9
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 336 YGQGCKIILASRRKRELERVKQDL 407
YG C+I + RRK + R+K+ L
Sbjct: 225 YGNNCEIDMYMRRKCQECRLKKCL 248
>AB095514-1|BAC76336.1| 72|Apis mellifera ecdyson receptor
protein.
Length = 72
Score = 21.4 bits (43), Expect = 7.9
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +3
Query: 336 YGQGCKIILASRRKRELERVKQDL 407
YG C+I + RRK + R+K+ L
Sbjct: 22 YGNNCEIDMYMRRKCQECRLKKCL 45
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,516
Number of Sequences: 438
Number of extensions: 4720
Number of successful extensions: 20
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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