Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_C14
(586 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1630 - 34896021-34896143,34896329-34896403,34896500-348965... 144 6e-35
08_02_0586 - 19024584-19024655,19024745-19024855,19024967-190250... 83 2e-16
06_02_0109 - 11919279-11920109 29 2.1
06_01_0520 + 3761990-3762327,3763304-3763589,3763746-3763820,376... 29 2.7
11_03_0071 - 9589669-9590079,9592113-9592334,9592455-9592608,959... 28 6.3
02_01_0382 - 2772378-2773544 28 6.3
11_06_0498 - 24344454-24344660,24344840-24344944,24345324-243454... 27 8.3
09_06_0317 - 22265786-22267618,22267874-22268446,22268546-222686... 27 8.3
01_05_0356 - 21338488-21340062 27 8.3
>04_04_1630 -
34896021-34896143,34896329-34896403,34896500-34896556,
34897176-34897352,34897426-34897492,34898043-34898101,
34898188-34898241,34898455-34898604,34898709-34898918,
34898980-34899039,34899399-34899527,34899616-34899720,
34899935-34900024,34900630-34900695,34901047-34901115,
34901348-34901467,34901572-34901634,34901681-34901817,
34902070-34902160,34902298-34902463,34902700-34904172,
34905666-34905940,34906322-34906819,34906996-34907145,
34907840-34907911,34908006-34908266,34908478-34908558,
34908745-34908996,34909323-34909382,34909602-34909853,
34910385-34910549,34910589-34910849,34911267-34912307,
34913398-34913457,34914055-34914165,34914448-34914534,
34915227-34915300,34915397-34915490,34915644-34915689,
34916397-34916521
Length = 2501
Score = 144 bits (348), Expect = 6e-35
Identities = 66/119 (55%), Positives = 78/119 (65%), Gaps = 1/119 (0%)
Frame = +3
Query: 192 INLYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHGLPHVLL 371
+N+YPL NYTFGTKEP EKD SV RF RM+ + K GMR SVE +LLV EH PH+LL
Sbjct: 9 VNVYPLANYTFGTKEPKMEKDTSVADRFARMKVNYMKEGMRTSVEAILLVQEHNHPHILL 68
Query: 372 LQLGTAFFKLPGGELNPGEDXIDGLKRLLTETL-XRQDGVKQEWLIEDTIXNWWRPNFE 545
LQ+G F KLPGG L PGE+ I+GLKR L L W + + + WWRPNFE
Sbjct: 69 LQIGNTFCKLPGGRLKPGENEIEGLKRKLCSKLAVNSPSFPPNWQVGECVAVWWRPNFE 127
>08_02_0586 -
19024584-19024655,19024745-19024855,19024967-19025053,
19025154-19025245,19025456-19025595,19025689-19025867
Length = 226
Score = 82.6 bits (195), Expect = 2e-16
Identities = 50/129 (38%), Positives = 65/129 (50%), Gaps = 11/129 (8%)
Frame = +3
Query: 192 INLYPLTNYTFGTKEPLFEKDAS----VPARFQRMREEFCKIGMRRSVEGVLLVHEHGLP 359
+ +YPL Y FG ++ + R R++ F G+R SV GVLLV P
Sbjct: 23 VEIYPLCRYYFGARDVAAGGAGAGLETAADRALRLKANFAAHGLRTSVHGVLLVELFDHP 82
Query: 360 HVLLLQLGTAFFKLPGGELNPGEDXIDGLKRLLTETL------XRQDG-VKQEWLIEDTI 518
HVLLLQ+ + F LPGG L PGE + GLKR L+ L +DG EW I + I
Sbjct: 83 HVLLLQVRNSSFLLPGGRLRPGEQDVQGLKRKLSTKLSVAGHQDDEDGDGDDEWQIGECI 142
Query: 519 XNWWRPNFE 545
WWR F+
Sbjct: 143 GMWWRSEFD 151
>06_02_0109 - 11919279-11920109
Length = 276
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = -3
Query: 581 RDVRWNVWILRWFEIRSPPVPYCVFNEPFLFDTVLSA*SLCEKPLQTINXIL 426
RD RW VW +W+ + P P + P T A C PLQ IL
Sbjct: 210 RDARWVVWYSQWYHLSRMPSP----SSPQASSTSSGA-GGCRPPLQPAAQIL 256
>06_01_0520 +
3761990-3762327,3763304-3763589,3763746-3763820,
3764013-3764961,3766967-3767064,3768144-3768284,
3768758-3768874,3768924-3769013,3769014-3771818
Length = 1632
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +3
Query: 63 KNKIKYKMAAVQGPPGNKQWPARPGLQHQISQNPSMNLTLNRSINLYPL 209
KNK++Y ++ Q NK WP P L ++ N++L + + L L
Sbjct: 657 KNKLRYGLSHQQIMDLNKTWPLHPILLIHLASELPKNVSLMQVVRLLHL 705
>11_03_0071 -
9589669-9590079,9592113-9592334,9592455-9592608,
9592981-9593212,9593303-9593558,9593850-9593870
Length = 431
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +3
Query: 132 PGLQHQISQNPSMNLTLNRSINLYPLTNYTFGTKEPLFE 248
PGL + +N S+NL + N+ L Y + TK + E
Sbjct: 24 PGLNDTVFKNESLNLMSVQHQNIVKLIGYCYETKNKVVE 62
>02_01_0382 - 2772378-2773544
Length = 388
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = -2
Query: 297 KTPLASSGTSPGPMRPSRTAA 235
K P+ASS TSP P R R+A+
Sbjct: 5 KQPMASSSTSPSPSRLPRSAS 25
>11_06_0498 -
24344454-24344660,24344840-24344944,24345324-24345407,
24345523-24345615,24345795-24345920,24347157-24347315,
24347398-24347475,24348316-24348375,24349433-24349555,
24349961-24350041
Length = 371
Score = 27.5 bits (58), Expect = 8.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = -3
Query: 197 INRPIES*IHAWVLAYLML*SWSRRPLFVTGR 102
I RP++S + W L+ L L +W P FV +
Sbjct: 260 IGRPVKSLLAVWGLSGLKLKTWVEAPSFVRAK 291
>09_06_0317 -
22265786-22267618,22267874-22268446,22268546-22268677,
22268931-22269137,22269287-22269388,22270742-22271032
Length = 1045
Score = 27.5 bits (58), Expect = 8.3
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -3
Query: 284 HPLEPRRDRCVLLEQRLLSSERVIRKWIQINRPI 183
H +EPR DR +L E + SS R W+ +P+
Sbjct: 445 HEVEPRIDREMLPEGQPFSSSRGSSLWLSHEKPL 478
>01_05_0356 - 21338488-21340062
Length = 524
Score = 27.5 bits (58), Expect = 8.3
Identities = 19/66 (28%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +3
Query: 234 EPLFEKDASVPARFQRMREEFCKIGM-RRSVEGVLLVHEHGLPHVLLLQLGTAFFKLPGG 410
E ++ P F+ +F G RR G+ L E +P++L L L ++LP G
Sbjct: 435 ERFLAREGKAPVDFRGKEADFIPFGSGRRLCPGIPLA-ERVMPYILALMLREFEWRLPDG 493
Query: 411 ELNPGE 428
++P E
Sbjct: 494 -VSPEE 498
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,196,443
Number of Sequences: 37544
Number of extensions: 301452
Number of successful extensions: 770
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 767
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1376330256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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