Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_C14
         (586 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         23   9.6  
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         23   9.6  
DQ370042-1|ABD18603.1|  194|Anopheles gambiae putative TIL domai...    23   9.6  
AJ439398-3|CAD28126.1|  566|Anopheles gambiae putative 5' nucleo...    23   9.6  

>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +3

Query: 105 PGNKQWPARPGLQHQISQNPSMNLTLNRSINLYPLTN 215
           P + Q P  P  QH   Q PS   +   SI+ + +TN
Sbjct: 98  PHHHQLPHHPHHQHHPQQQPSPQTSPPASIS-FSITN 133


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 13/37 (35%), Positives = 18/37 (48%)
 Frame = +3

Query: 105 PGNKQWPARPGLQHQISQNPSMNLTLNRSINLYPLTN 215
           P + Q P  P  QH   Q PS   +   SI+ + +TN
Sbjct: 98  PHHHQLPHHPHHQHHPQQQPSPQTSPPASIS-FSITN 133


>DQ370042-1|ABD18603.1|  194|Anopheles gambiae putative TIL domain
           polypeptide protein.
          Length = 194

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 10/19 (52%), Positives = 11/19 (57%)
 Frame = -1

Query: 382 PSCSNST*GRPCSCTNNTP 326
           PS   S+ G PC  TNN P
Sbjct: 176 PSYIRSSDGGPCIPTNNCP 194


>AJ439398-3|CAD28126.1|  566|Anopheles gambiae putative 5'
           nucleotidase protein.
          Length = 566

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 20/66 (30%), Positives = 27/66 (40%), Gaps = 1/66 (1%)
 Frame = +3

Query: 198 LYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGV-LLVHEHGLPHVLLL 374
           LYPLT          FE+  +V  R +    E C  G  R V  V  L  E+   + + L
Sbjct: 47  LYPLTIIHLNDFHARFEETNTVSTRCKPDEGERCIGGYARVVSRVKSLQQEYADRNPIYL 106

Query: 375 QLGTAF 392
             G +F
Sbjct: 107 NAGDSF 112


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 596,113
Number of Sequences: 2352
Number of extensions: 11666
Number of successful extensions: 20
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55927431
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)