Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_C14
(586 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC001403-1|AAH01403.1| 227|Homo sapiens nudix (nucleoside dipho... 227 2e-59
AJ001810-1|CAA05026.1| 227|Homo sapiens pre-mRNA cleavage facto... 227 2e-59
BX537360-1|CAD97606.1| 227|Homo sapiens hypothetical protein pr... 225 7e-59
CR456919-1|CAG33200.1| 227|Homo sapiens CPSF5 protein. 225 1e-58
EF452237-1|ABO40480.1| 975|Homo sapiens NOD5 protein. 29 9.1
DQ839131-1|ABH07519.1| 463|Homo sapiens lipid storage droplet p... 29 9.1
BC131524-1|AAI31525.1| 463|Homo sapiens lipid storage droplet p... 29 9.1
BC110890-1|AAI10891.1| 975|Homo sapiens NLRX1 protein protein. 29 9.1
BC013199-1|AAH13199.3| 708|Homo sapiens NLRX1 protein protein. 29 9.1
AY245437-1|AAP31240.1| 975|Homo sapiens NOD26 protein. 29 9.1
AK127689-1|BAC87086.1| 138|Homo sapiens protein ( Homo sapiens ... 29 9.1
AK025131-1|BAB15075.1| 554|Homo sapiens protein ( Homo sapiens ... 29 9.1
AB094095-1|BAC76049.1| 975|Homo sapiens DLNB26 protein. 29 9.1
>BC001403-1|AAH01403.1| 227|Homo sapiens nudix (nucleoside
diphosphate linked moiety X)-type motif 21 protein.
Length = 227
Score = 227 bits (556), Expect = 2e-59
Identities = 102/124 (82%), Positives = 113/124 (91%)
Frame = +3
Query: 174 LTLNRSINLYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHG 353
LTL R+INLYPLTNYTFGTKEPL+EKD+SV ARFQRMREEF KIGMRR+VEGVL+VHEH
Sbjct: 31 LTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHR 90
Query: 354 LPHVLLLQLGTAFFKLPGGELNPGEDXIDGLKRLLTETLXRQDGVKQEWLIEDTIXNWWR 533
LPHVLLLQLGT FFKLPGGELNPGED ++GLKRL+TE L RQDGV Q+W+I+D I NWWR
Sbjct: 91 LPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGNWWR 150
Query: 534 PNFE 545
PNFE
Sbjct: 151 PNFE 154
>AJ001810-1|CAA05026.1| 227|Homo sapiens pre-mRNA cleavage factor I
25 kDa subunit protein.
Length = 227
Score = 227 bits (556), Expect = 2e-59
Identities = 102/124 (82%), Positives = 113/124 (91%)
Frame = +3
Query: 174 LTLNRSINLYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHG 353
LTL R+INLYPLTNYTFGTKEPL+EKD+SV ARFQRMREEF KIGMRR+VEGVL+VHEH
Sbjct: 31 LTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHR 90
Query: 354 LPHVLLLQLGTAFFKLPGGELNPGEDXIDGLKRLLTETLXRQDGVKQEWLIEDTIXNWWR 533
LPHVLLLQLGT FFKLPGGELNPGED ++GLKRL+TE L RQDGV Q+W+I+D I NWWR
Sbjct: 91 LPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGNWWR 150
Query: 534 PNFE 545
PNFE
Sbjct: 151 PNFE 154
>BX537360-1|CAD97606.1| 227|Homo sapiens hypothetical protein
protein.
Length = 227
Score = 225 bits (551), Expect = 7e-59
Identities = 101/124 (81%), Positives = 113/124 (91%)
Frame = +3
Query: 174 LTLNRSINLYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHG 353
LTL R+INLYPLTNYTFGTKEPL+EKD+SV ARFQRMREEF KIGMRR+VEGVL+VHEH
Sbjct: 31 LTLERTINLYPLTNYTFGTKEPLYEKDSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHR 90
Query: 354 LPHVLLLQLGTAFFKLPGGELNPGEDXIDGLKRLLTETLXRQDGVKQEWLIEDTIXNWWR 533
LPHVLLLQLGT FFKLPGGEL+PGED ++GLKRL+TE L RQDGV Q+W+I+D I NWWR
Sbjct: 91 LPHVLLLQLGTTFFKLPGGELDPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGNWWR 150
Query: 534 PNFE 545
PNFE
Sbjct: 151 PNFE 154
>CR456919-1|CAG33200.1| 227|Homo sapiens CPSF5 protein.
Length = 227
Score = 225 bits (549), Expect = 1e-58
Identities = 101/124 (81%), Positives = 112/124 (90%)
Frame = +3
Query: 174 LTLNRSINLYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHG 353
LTL R+INLYPLTNYTFGTKEPL+EK +SV ARFQRMREEF KIGMRR+VEGVL+VHEH
Sbjct: 31 LTLERTINLYPLTNYTFGTKEPLYEKGSSVAARFQRMREEFDKIGMRRTVEGVLIVHEHR 90
Query: 354 LPHVLLLQLGTAFFKLPGGELNPGEDXIDGLKRLLTETLXRQDGVKQEWLIEDTIXNWWR 533
LPHVLLLQLGT FFKLPGGELNPGED ++GLKRL+TE L RQDGV Q+W+I+D I NWWR
Sbjct: 91 LPHVLLLQLGTTFFKLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGNWWR 150
Query: 534 PNFE 545
PNFE
Sbjct: 151 PNFE 154
>EF452237-1|ABO40480.1| 975|Homo sapiens NOD5 protein.
Length = 975
Score = 29.5 bits (63), Expect = 9.1
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = -1
Query: 202 YKLIDLLRVKFMLGFWLI*CCSPGRAGHCL--LPGGP*TAAILYLILFLTKPRMQR 41
++L+ + R + L F+L C PGRAG + +P A LY++L L K +Q+
Sbjct: 463 FQLLHIFR-RDALRFFLAPCVEPGRAGTFVFTVPAMQEYLAALYIVLGLRKTTLQK 517
>DQ839131-1|ABH07519.1| 463|Homo sapiens lipid storage droplet
protein 5 protein.
Length = 463
Score = 29.5 bits (63), Expect = 9.1
Identities = 18/54 (33%), Positives = 22/54 (40%)
Frame = -2
Query: 483 RLVCXKSL*EASSNHQXHPLQGSVLHLAT*KTPCRVAVTAHEVDHVHVLITHLQ 322
R C S+ HPL GS LA C +T +DH L+ HLQ
Sbjct: 33 RATCTAVCDVYSAAKDRHPLLGSACRLAE---NCVCGLTTRALDHAQPLLEHLQ 83
>BC131524-1|AAI31525.1| 463|Homo sapiens lipid storage droplet
protein 5 protein.
Length = 463
Score = 29.5 bits (63), Expect = 9.1
Identities = 18/54 (33%), Positives = 22/54 (40%)
Frame = -2
Query: 483 RLVCXKSL*EASSNHQXHPLQGSVLHLAT*KTPCRVAVTAHEVDHVHVLITHLQ 322
R C S+ HPL GS LA C +T +DH L+ HLQ
Sbjct: 33 RATCTAVCDVYSAAKDRHPLLGSACRLAE---NCVCGLTTRALDHAQPLLEHLQ 83
>BC110890-1|AAI10891.1| 975|Homo sapiens NLRX1 protein protein.
Length = 975
Score = 29.5 bits (63), Expect = 9.1
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = -1
Query: 202 YKLIDLLRVKFMLGFWLI*CCSPGRAGHCL--LPGGP*TAAILYLILFLTKPRMQR 41
++L+ + R + L F+L C PGRAG + +P A LY++L L K +Q+
Sbjct: 463 FQLLHIFR-RDALRFFLAPCVEPGRAGTFVFTVPAMQEYLAALYIVLGLRKTTLQK 517
>BC013199-1|AAH13199.3| 708|Homo sapiens NLRX1 protein protein.
Length = 708
Score = 29.5 bits (63), Expect = 9.1
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = -1
Query: 202 YKLIDLLRVKFMLGFWLI*CCSPGRAGHCL--LPGGP*TAAILYLILFLTKPRMQR 41
++L+ + R + L F+L C PGRAG + +P A LY++L L K +Q+
Sbjct: 250 FQLLHIFR-RDALRFFLAPCVEPGRAGTFVFTVPAMQEYLAALYIVLGLRKTTLQK 304
>AY245437-1|AAP31240.1| 975|Homo sapiens NOD26 protein.
Length = 975
Score = 29.5 bits (63), Expect = 9.1
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = -1
Query: 202 YKLIDLLRVKFMLGFWLI*CCSPGRAGHCL--LPGGP*TAAILYLILFLTKPRMQR 41
++L+ + R + L F+L C PGRAG + +P A LY++L L K +Q+
Sbjct: 463 FQLLHIFR-RDALRFFLAPCVEPGRAGTFVFTVPAMQEYLAALYIVLGLRKTTLQK 517
>AK127689-1|BAC87086.1| 138|Homo sapiens protein ( Homo sapiens
cDNA FLJ45787 fis, clone NETRP2008582, weakly similar
to Adipophilin. ).
Length = 138
Score = 29.5 bits (63), Expect = 9.1
Identities = 18/54 (33%), Positives = 22/54 (40%)
Frame = -2
Query: 483 RLVCXKSL*EASSNHQXHPLQGSVLHLAT*KTPCRVAVTAHEVDHVHVLITHLQ 322
R C S+ HPL GS LA C +T +DH L+ HLQ
Sbjct: 33 RATCTAVCDVYSAAKDRHPLLGSACRLAE---NCVCGLTTRALDHAQPLLEHLQ 83
>AK025131-1|BAB15075.1| 554|Homo sapiens protein ( Homo sapiens
cDNA: FLJ21478 fis, clone COL05012. ).
Length = 554
Score = 29.5 bits (63), Expect = 9.1
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = -1
Query: 202 YKLIDLLRVKFMLGFWLI*CCSPGRAGHCL--LPGGP*TAAILYLILFLTKPRMQR 41
++L+ + R + L F+L C PGRAG + +P A LY++L L K +Q+
Sbjct: 42 FQLLHIFR-RDALRFFLAPCVEPGRAGTFVFTVPAMQEYLAALYIVLGLRKTTLQK 96
>AB094095-1|BAC76049.1| 975|Homo sapiens DLNB26 protein.
Length = 975
Score = 29.5 bits (63), Expect = 9.1
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Frame = -1
Query: 202 YKLIDLLRVKFMLGFWLI*CCSPGRAGHCL--LPGGP*TAAILYLILFLTKPRMQR 41
++L+ + R + L F+L C PGRAG + +P A LY++L L K +Q+
Sbjct: 463 FQLLHIFR-RDALRFFLAPCVEPGRAGTFVFTVPAMQEYLAALYIVLGLRKTTLQK 517
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,569,254
Number of Sequences: 237096
Number of extensions: 1729376
Number of successful extensions: 4882
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 4226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4872
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6098631048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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