Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_C14
         (586 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79755-4|CAB02106.1|  227|Caenorhabditis elegans Hypothetical pr...   187   4e-48
U21318-2|AAC46668.1|  285|Caenorhabditis elegans Collagen protei...    31   0.46 
Z81057-4|CAB02918.1|  559|Caenorhabditis elegans Hypothetical pr...    28   5.6  
Z68113-3|CAA92150.1|  333|Caenorhabditis elegans Hypothetical pr...    28   5.6  
Z68104-8|CAA92117.1| 1077|Caenorhabditis elegans Hypothetical pr...    27   9.8  
Z66563-4|CAA91470.1| 1077|Caenorhabditis elegans Hypothetical pr...    27   9.8  
AF435953-1|AAL30829.1| 1077|Caenorhabditis elegans eIF2 alpha ki...    27   9.8  
AF193341-1|AAF61201.1| 1077|Caenorhabditis elegans eukaryotic tr...    27   9.8  

>Z79755-4|CAB02106.1|  227|Caenorhabditis elegans Hypothetical
           protein F43G9.5 protein.
          Length = 227

 Score =  187 bits (456), Expect = 4e-48
 Identities = 83/121 (68%), Positives = 97/121 (80%)
 Frame = +3

Query: 183 NRSINLYPLTNYTFGTKEPLFEKDASVPARFQRMREEFCKIGMRRSVEGVLLVHEHGLPH 362
           NR+IN+YPLTNYTFGTK+   EKD SVP RF+RM++E+  +GMRRSVE VL+VHEH LPH
Sbjct: 31  NRTINVYPLTNYTFGTKDAQAEKDKSVPERFKRMKDEYEVMGMRRSVEAVLIVHEHSLPH 90

Query: 363 VLLLQLGTAFFKLPGGELNPGEDXIDGLKRLLTETLXRQDGVKQEWLIEDTIXNWWRPNF 542
           +LLLQ+GT F+KLPGGEL  GED I G+ RLL ETL R DG   EW IED I NWWRPNF
Sbjct: 91  ILLLQIGTTFYKLPGGELELGEDEISGVTRLLNETLGRTDGETNEWTIEDEIGNWWRPNF 150

Query: 543 E 545
           +
Sbjct: 151 D 151


>U21318-2|AAC46668.1|  285|Caenorhabditis elegans Collagen protein
           75 protein.
          Length = 285

 Score = 31.5 bits (68), Expect = 0.46
 Identities = 19/56 (33%), Positives = 26/56 (46%)
 Frame = +3

Query: 9   VLVKQFLVCDHLCIRGFVKNKIKYKMAAVQGPPGNKQWPARPGLQHQISQNPSMNL 176
           +L +Q   C  +C  G  K K  YK   + GPPG   WP  PG++    +  S  L
Sbjct: 119 ILYQQVFGC-RICPYG-PKGKSGYK--GIDGPPGIPGWPGEPGVRGMNGERGSTGL 170


>Z81057-4|CAB02918.1|  559|Caenorhabditis elegans Hypothetical
           protein F10D11.5 protein.
          Length = 559

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 14/28 (50%), Positives = 19/28 (67%), Gaps = 2/28 (7%)
 Frame = +3

Query: 138 LQHQISQNP--SMNLTLNRSINLYPLTN 215
           L+H+I   P  S+NLT+NR  N+  LTN
Sbjct: 165 LEHEIQSKPARSVNLTVNRVWNIKCLTN 192


>Z68113-3|CAA92150.1|  333|Caenorhabditis elegans Hypothetical
           protein E03G2.4 protein.
          Length = 333

 Score = 27.9 bits (59), Expect = 5.6
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = +3

Query: 81  KMAAVQGPPGNKQWPARPGLQ 143
           ++A ++GPPG    P  PGLQ
Sbjct: 253 EVAGLEGPPGQSGLPGMPGLQ 273


>Z68104-8|CAA92117.1| 1077|Caenorhabditis elegans Hypothetical
           protein F46C3.1 protein.
          Length = 1077

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = -3

Query: 152 YLML*SWSRRPLFVTGRPLNCCHLIFDLIFNKTAYAEMI 36
           YL+L S  +R  F    P+     IF  IFN TA    +
Sbjct: 426 YLVLESEPQRVKFKVNSPITLMQTIFSYIFNPTAVVSFL 464


>Z66563-4|CAA91470.1| 1077|Caenorhabditis elegans Hypothetical
           protein F46C3.1 protein.
          Length = 1077

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = -3

Query: 152 YLML*SWSRRPLFVTGRPLNCCHLIFDLIFNKTAYAEMI 36
           YL+L S  +R  F    P+     IF  IFN TA    +
Sbjct: 426 YLVLESEPQRVKFKVNSPITLMQTIFSYIFNPTAVVSFL 464


>AF435953-1|AAL30829.1| 1077|Caenorhabditis elegans eIF2 alpha
           kinase protein.
          Length = 1077

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = -3

Query: 152 YLML*SWSRRPLFVTGRPLNCCHLIFDLIFNKTAYAEMI 36
           YL+L S  +R  F    P+     IF  IFN TA    +
Sbjct: 426 YLVLESEPQRVKFKVNSPITLMQTIFSYIFNPTAVVSFL 464


>AF193341-1|AAF61201.1| 1077|Caenorhabditis elegans eukaryotic
           translation initiationfactor 2 alpha kinase PEK protein.
          Length = 1077

 Score = 27.1 bits (57), Expect = 9.8
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = -3

Query: 152 YLML*SWSRRPLFVTGRPLNCCHLIFDLIFNKTAYAEMI 36
           YL+L S  +R  F    P+     IF  IFN TA    +
Sbjct: 426 YLVLESEPQRVKFKVNSPITLMQTIFSYIFNPTAVVSFL 464


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,018,085
Number of Sequences: 27780
Number of extensions: 264590
Number of successful extensions: 894
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 894
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1226509528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)