Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_C14
         (586 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    22   3.9  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    22   3.9  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   6.7  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   8.9  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   8.9  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   8.9  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    21   8.9  

>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 381 RVAVTAHEVDHVHVLITH 328
           R+  T +E DHV  LIT+
Sbjct: 165 RILKTKNECDHVQFLITN 182


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -2

Query: 381 RVAVTAHEVDHVHVLITH 328
           R+  T +E DHV  LIT+
Sbjct: 165 RILKTKNECDHVQFLITN 182


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 11/44 (25%), Positives = 20/44 (45%)
 Frame = +3

Query: 3   GFVLVKQFLVCDHLCIRGFVKNKIKYKMAAVQGPPGNKQWPARP 134
           G  L+++  VC    +R    +K +Y+M+  +      QW   P
Sbjct: 383 GAELMQETHVCFFSLLRDAFTSKGEYRMSTGEMKEAITQWQGNP 426


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +3

Query: 3   GFVLVKQFLVCDHLCIRGFVKN 68
           G  L K +L CD LC    + N
Sbjct: 105 GIHLCKLWLTCDVLCCTASILN 126


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +3

Query: 3   GFVLVKQFLVCDHLCIRGFVKN 68
           G  L K +L CD LC    + N
Sbjct: 105 GIHLCKLWLTCDVLCCTASILN 126


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +3

Query: 3   GFVLVKQFLVCDHLCIRGFVKN 68
           G  L K +L CD LC    + N
Sbjct: 105 GIHLCKLWLTCDVLCCTASILN 126


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 17/61 (27%), Positives = 25/61 (40%), Gaps = 6/61 (9%)
 Frame = +3

Query: 360 HVLLLQLGTAFFKLPGGELNPGEDXIDGLKRLL------TETLXRQDGVKQEWLIEDTIX 521
           H++    G   F+         +D +    RL+      TETL  Q G+K   LIE  + 
Sbjct: 17  HIIYSVAGLKIFEANPDTKRLYDDLLSNYNRLIRPVMNNTETLTVQLGLKLSQLIEMNLK 76

Query: 522 N 524
           N
Sbjct: 77  N 77


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,149
Number of Sequences: 438
Number of extensions: 2998
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16993167
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)