Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_C11
(654 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein. 25 0.48
AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein. 25 0.48
AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein. 25 0.48
AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein. 25 0.48
AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein. 25 0.48
AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein. 25 0.48
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 25 0.48
AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex det... 25 0.48
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 25 0.84
AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex det... 24 1.5
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 22 6.0
>AY569719-1|AAS86672.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.4 bits (53), Expect = 0.48
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +2
Query: 455 EKSTVESTLQKENSSQTEKTVLNITDDKGEND 550
E+ +++ L K N +TVL + +K EN+
Sbjct: 172 EREEIKNILNKTNEITEHRTVLAVNIEKSENE 203
>AY569718-1|AAS86671.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.4 bits (53), Expect = 0.48
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +2
Query: 455 EKSTVESTLQKENSSQTEKTVLNITDDKGEND 550
E+ +++ L K N +TVL + +K EN+
Sbjct: 172 EREEIKNILNKTNEITEHRTVLAVNIEKSENE 203
>AY569715-1|AAS86668.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.4 bits (53), Expect = 0.48
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +2
Query: 455 EKSTVESTLQKENSSQTEKTVLNITDDKGEND 550
E+ +++ L K N +TVL + +K EN+
Sbjct: 172 EREEIKNILNKTNEITEHRTVLAVNIEKSENE 203
>AY569714-1|AAS86667.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.4 bits (53), Expect = 0.48
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +2
Query: 455 EKSTVESTLQKENSSQTEKTVLNITDDKGEND 550
E+ +++ L K N +TVL + +K EN+
Sbjct: 172 EREEIKNILNKTNEITEHRTVLAVNIEKSENE 203
>AY569713-1|AAS86666.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.4 bits (53), Expect = 0.48
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +2
Query: 455 EKSTVESTLQKENSSQTEKTVLNITDDKGEND 550
E+ +++ L K N +TVL + +K EN+
Sbjct: 172 EREEIKNILNKTNEITEHRTVLAVNIEKSENE 203
>AY569711-1|AAS86664.1| 401|Apis mellifera feminizer protein.
Length = 401
Score = 25.4 bits (53), Expect = 0.48
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +2
Query: 455 EKSTVESTLQKENSSQTEKTVLNITDDKGEND 550
E+ +++ L K N +TVL + +K EN+
Sbjct: 172 EREEIKNILNKTNEITEHRTVLAVNIEKSENE 203
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 25.4 bits (53), Expect = 0.48
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +2
Query: 455 EKSTVESTLQKENSSQTEKTVLNITDDKGEND 550
E+ +++ L K N +TVL + +K EN+
Sbjct: 172 EREEIKNILNKTNEITEHRTVLAVNIEKSENE 203
>AY350616-1|AAQ57658.1| 401|Apis mellifera complementary sex
determiner protein.
Length = 401
Score = 25.4 bits (53), Expect = 0.48
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +2
Query: 455 EKSTVESTLQKENSSQTEKTVLNITDDKGEND 550
E+ +++ L K N +TVL + +K EN+
Sbjct: 172 EREEIKNILNKTNEITEHRTVLAVNIEKSENE 203
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 24.6 bits (51), Expect = 0.84
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +2
Query: 566 EDNEKTKKPSKSITDSSTWGEYASYITY 649
ED E + SKS T S W +A+ I +
Sbjct: 383 EDVENNSEVSKSRTKESAWRHFAAIIEW 410
Score = 21.8 bits (44), Expect = 6.0
Identities = 8/27 (29%), Positives = 15/27 (55%)
Frame = +3
Query: 528 LMIRVKMIRIIHLKIMKKQRNPPNLLL 608
L+ + + +H ++ NPPN+LL
Sbjct: 291 LICHILCMSDLHWQLPHNSTNPPNILL 317
>AY569694-1|AAS86647.1| 400|Apis mellifera complementary sex
determiner protein.
Length = 400
Score = 23.8 bits (49), Expect = 1.5
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +2
Query: 455 EKSTVESTLQKENSSQTEKTVLNITDDKGEND 550
E+ +++ L K N + TVL + +K EN+
Sbjct: 164 EREEIKNVLTKINKIKEHDTVLVVNIEKSENE 195
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 21.8 bits (44), Expect = 6.0
Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 2/30 (6%)
Frame = +2
Query: 527 TDDKGENDKDNTLEDNEKTKK--PSKSITD 610
TDDK +++ DN +N K++K P+ S +D
Sbjct: 85 TDDKDDDESDN---ENIKSQKEFPNSSSSD 111
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,002
Number of Sequences: 438
Number of extensions: 2687
Number of successful extensions: 14
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19804986
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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