Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_C09
         (655 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            25   2.1  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    25   2.8  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   8.4  

>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 12/40 (30%), Positives = 18/40 (45%)
 Frame = +3

Query: 300 CWIH*DPSWTTRSVDCLGGAYV*RLSTSLLQKLVQMQEEG 419
           C  + D SW++  VDC    Y  RL   +     Q+  +G
Sbjct: 762 CTCYHDQSWSSNVVDCSRAGYDDRLPDQIPMDSTQIYLDG 801


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 7/23 (30%), Positives = 16/23 (69%)
 Frame = +1

Query: 325 GLRALLTVWAEHMSEDCRRRFYK 393
           G+R   ++WAE +  +CR+++ +
Sbjct: 770 GIRYASSIWAESLKFECRKQWLR 792


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 18/67 (26%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
 Frame = +1

Query: 451  ELGRKSIEKDFKKMIRYCSVVRV--IAHTQMKLLKQRQKKAHIMEIQLNGGTIEDKVKWA 624
            EL RK  E    +++     VR+  IAH+ +K+    ++      +Q     I  + +WA
Sbjct: 2556 ELARKQGEPKPMELLDVKCHVRLAEIAHSLLKVSPYDRESMACRGLQRYMQCIFPRAEWA 2615

Query: 625  XEHLEKP 645
             +H  KP
Sbjct: 2616 DDHGMKP 2622


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 715,403
Number of Sequences: 2352
Number of extensions: 14345
Number of successful extensions: 14
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)