Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_B18
(656 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U75467-1|AAB18341.1| 724|Drosophila melanogaster Atu protein. 37 0.028
AY075403-1|AAL68232.1| 725|Drosophila melanogaster LD30655p pro... 37 0.028
AE014297-303|AAF51991.1| 725|Drosophila melanogaster CG1433-PA ... 37 0.028
AY122082-1|AAM52594.1| 928|Drosophila melanogaster AT26096p pro... 31 1.4
AE014296-2489|AAF49656.2| 1190|Drosophila melanogaster CG7003-PA... 31 1.8
BT015206-1|AAT94435.1| 932|Drosophila melanogaster RE62451p pro... 30 2.4
AF162793-1|AAD50780.1| 1257|Drosophila melanogaster XPG variant ... 30 2.4
AF162792-1|AAD50779.1| 1236|Drosophila melanogaster XPG protein. 30 2.4
AF144092-1|AAD38375.1| 1236|Drosophila melanogaster nucleotide e... 30 2.4
AF125578-1|AAD47568.1| 1236|Drosophila melanogaster DNA repair e... 30 2.4
AE014134-1515|AAO41169.1| 1236|Drosophila melanogaster CG10890-P... 30 2.4
AE014134-1514|AAF52678.1| 1236|Drosophila melanogaster CG10890-P... 30 2.4
AE014134-1513|AAG22424.1| 1257|Drosophila melanogaster CG10890-P... 30 2.4
Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia poly... 29 4.2
U97685-1|AAB58311.1| 986|Drosophila melanogaster replication fa... 29 4.2
L17340-1|AAA28573.1| 986|Drosophila melanogaster transcription ... 29 4.2
BT003618-1|AAO39621.1| 986|Drosophila melanogaster GH06471p pro... 29 4.2
AY122077-1|AAM52589.1| 1008|Drosophila melanogaster AT18625p pro... 29 4.2
AE014297-166|AAF52082.1| 986|Drosophila melanogaster CG1119-PA,... 29 4.2
AE014297-165|AAX52937.1| 1008|Drosophila melanogaster CG1119-PB,... 29 4.2
AE014296-326|AAF47543.2| 1062|Drosophila melanogaster CG7971-PA,... 29 4.2
AE014296-325|AAZ66051.1| 849|Drosophila melanogaster CG7971-PD,... 29 4.2
AE014296-324|AAF47542.2| 1107|Drosophila melanogaster CG7971-PC,... 29 4.2
BT015197-1|AAT94426.1| 954|Drosophila melanogaster RE71183p pro... 29 5.6
AF217651-4|AAF35310.1| 769|Drosophila melanogaster c12.2 protein. 29 5.6
AE014298-1328|AAN09251.1| 1386|Drosophila melanogaster CG12149-P... 29 5.6
AE014296-2238|AAF49848.1| 954|Drosophila melanogaster CG11274-P... 29 5.6
BT016045-1|AAV36930.1| 383|Drosophila melanogaster LP19870p pro... 29 7.3
AE014297-989|AAF54415.3| 383|Drosophila melanogaster CG8319-PA ... 29 7.3
BT003619-1|AAO39622.1| 1167|Drosophila melanogaster GH12052p pro... 28 9.7
AY089552-1|AAL90290.1| 1253|Drosophila melanogaster LD30834p pro... 28 9.7
AY052127-1|AAK93551.1| 1062|Drosophila melanogaster SD07741p pro... 28 9.7
AE014297-2213|AAF55319.2| 1298|Drosophila melanogaster CG14896-P... 28 9.7
AE014296-1190|AAX52757.1| 1644|Drosophila melanogaster CG33556-P... 28 9.7
AB061681-1|BAC76439.1| 1644|Drosophila melanogaster ah1644 protein. 28 9.7
>U75467-1|AAB18341.1| 724|Drosophila melanogaster Atu protein.
Length = 724
Score = 36.7 bits (81), Expect = 0.028
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +1
Query: 433 KKRERQITPSPELKKASSDEEEVISLPTKRKRIRLNPVDSD-DSDVENKA 579
KK+ R+ + S + KK S + ++ PTK K+ RL DSD + DV KA
Sbjct: 248 KKKARKASGSDQEKKKSGSDSDIEESPTKAKKSRLIDTDSDSNQDVGKKA 297
>AY075403-1|AAL68232.1| 725|Drosophila melanogaster LD30655p
protein.
Length = 725
Score = 36.7 bits (81), Expect = 0.028
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +1
Query: 433 KKRERQITPSPELKKASSDEEEVISLPTKRKRIRLNPVDSD-DSDVENKA 579
KK+ R+ + S + KK S + ++ PTK K+ RL DSD + DV KA
Sbjct: 249 KKKARKASGSDQEKKKSGSDSDIEESPTKAKKSRLIDTDSDSNQDVGKKA 298
>AE014297-303|AAF51991.1| 725|Drosophila melanogaster CG1433-PA
protein.
Length = 725
Score = 36.7 bits (81), Expect = 0.028
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Frame = +1
Query: 433 KKRERQITPSPELKKASSDEEEVISLPTKRKRIRLNPVDSD-DSDVENKA 579
KK+ R+ + S + KK S + ++ PTK K+ RL DSD + DV KA
Sbjct: 249 KKKARKASGSDQEKKKSGSDSDIEESPTKAKKSRLIDTDSDSNQDVGKKA 298
>AY122082-1|AAM52594.1| 928|Drosophila melanogaster AT26096p
protein.
Length = 928
Score = 31.1 bits (67), Expect = 1.4
Identities = 19/62 (30%), Positives = 31/62 (50%)
Frame = +1
Query: 397 RKSSKKGIHLENKKRERQITPSPELKKASSDEEEVISLPTKRKRIRLNPVDSDDSDVENK 576
R ++ + LE + +R ITP + KA E P+K L DSD++D+E +
Sbjct: 207 RGTTADWLGLEQEPDQRPITPKAQTAKAQPSSES----PSKNTADILRLPDSDENDMEQE 262
Query: 577 AD 582
A+
Sbjct: 263 AE 264
>AE014296-2489|AAF49656.2| 1190|Drosophila melanogaster CG7003-PA
protein.
Length = 1190
Score = 30.7 bits (66), Expect = 1.8
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 5/48 (10%)
Frame = +3
Query: 276 MSKRNSTGAA----NTLFNYFTKTPP-TNKKLKADATEDTDCNGSPKK 404
MSK+ +T NTL NYF+K+P KKL D D + S K+
Sbjct: 1 MSKKLNTSVGGTPTNTLLNYFSKSPAFDKKKLTPSVKTDPDASKSEKE 48
>BT015206-1|AAT94435.1| 932|Drosophila melanogaster RE62451p
protein.
Length = 932
Score = 30.3 bits (65), Expect = 2.4
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 279 SKRNSTGAANTLFNYFTK-TPPTNKKLKADATEDTDCNGSPKKQ 407
S S G T +F K TP + +K +DA ED+D SP K+
Sbjct: 742 SNETSPGTPKTPKPFFRKRTPKSGRKRASDANEDSDEEVSPTKR 785
>AF162793-1|AAD50780.1| 1257|Drosophila melanogaster XPG variant
protein.
Length = 1257
Score = 30.3 bits (65), Expect = 2.4
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 279 SKRNSTGAANTLFNYFTK-TPPTNKKLKADATEDTDCNGSPKKQ 407
S S G T +F K TP + +K +DA ED+D SP K+
Sbjct: 763 SNETSPGTPKTPKPFFRKRTPKSGRKRASDANEDSDEEVSPTKR 806
>AF162792-1|AAD50779.1| 1236|Drosophila melanogaster XPG protein.
Length = 1236
Score = 30.3 bits (65), Expect = 2.4
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 279 SKRNSTGAANTLFNYFTK-TPPTNKKLKADATEDTDCNGSPKKQ 407
S S G T +F K TP + +K +DA ED+D SP K+
Sbjct: 742 SNETSPGTPKTPKPFFRKRTPKSGRKRASDANEDSDEEVSPTKR 785
>AF144092-1|AAD38375.1| 1236|Drosophila melanogaster nucleotide
excision repair proteinMUS201 protein.
Length = 1236
Score = 30.3 bits (65), Expect = 2.4
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 279 SKRNSTGAANTLFNYFTK-TPPTNKKLKADATEDTDCNGSPKKQ 407
S S G T +F K TP + +K +DA ED+D SP K+
Sbjct: 742 SNETSPGTPKTPKPFFRKRTPKSGRKRASDANEDSDEEVSPTKR 785
>AF125578-1|AAD47568.1| 1236|Drosophila melanogaster DNA repair
endonuclease protein.
Length = 1236
Score = 30.3 bits (65), Expect = 2.4
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 279 SKRNSTGAANTLFNYFTK-TPPTNKKLKADATEDTDCNGSPKKQ 407
S S G T +F K TP + +K +DA ED+D SP K+
Sbjct: 742 SNETSPGTPKTPKPFFRKRTPKSGRKRASDANEDSDEEVSPTKR 785
>AE014134-1515|AAO41169.1| 1236|Drosophila melanogaster CG10890-PC,
isoform C protein.
Length = 1236
Score = 30.3 bits (65), Expect = 2.4
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 279 SKRNSTGAANTLFNYFTK-TPPTNKKLKADATEDTDCNGSPKKQ 407
S S G T +F K TP + +K +DA ED+D SP K+
Sbjct: 742 SNETSPGTPKTPKPFFRKRTPKSGRKRASDANEDSDEEVSPTKR 785
>AE014134-1514|AAF52678.1| 1236|Drosophila melanogaster CG10890-PB,
isoform B protein.
Length = 1236
Score = 30.3 bits (65), Expect = 2.4
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 279 SKRNSTGAANTLFNYFTK-TPPTNKKLKADATEDTDCNGSPKKQ 407
S S G T +F K TP + +K +DA ED+D SP K+
Sbjct: 742 SNETSPGTPKTPKPFFRKRTPKSGRKRASDANEDSDEEVSPTKR 785
>AE014134-1513|AAG22424.1| 1257|Drosophila melanogaster CG10890-PA,
isoform A protein.
Length = 1257
Score = 30.3 bits (65), Expect = 2.4
Identities = 17/44 (38%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Frame = +3
Query: 279 SKRNSTGAANTLFNYFTK-TPPTNKKLKADATEDTDCNGSPKKQ 407
S S G T +F K TP + +K +DA ED+D SP K+
Sbjct: 763 SNETSPGTPKTPKPFFRKRTPKSGRKRASDANEDSDEEVSPTKR 806
>Z27119-1|CAA81643.1| 1333|Drosophila melanogaster blastopia
polyprotein protein.
Length = 1333
Score = 29.5 bits (63), Expect = 4.2
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3
Query: 324 FTKTPPTNKKLKAD 365
FT+TPPTNKKL D
Sbjct: 2 FTRTPPTNKKLNTD 15
>U97685-1|AAB58311.1| 986|Drosophila melanogaster replication
factor C large subunit protein.
Length = 986
Score = 29.5 bits (63), Expect = 4.2
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = +1
Query: 427 ENKKRERQITPS--PELKKA---SSDEEEVISLPTKRKRIRLNPVDSDDSDV 567
++ + E TPS P+ +KA SSDE+EV+S P +KR S+D V
Sbjct: 17 KSAEAENGETPSKAPKRRKAVIISSDEDEVVSPPETKKRKASKTASSEDDVV 68
>L17340-1|AAA28573.1| 986|Drosophila melanogaster transcription
factor protein.
Length = 986
Score = 29.5 bits (63), Expect = 4.2
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = +1
Query: 427 ENKKRERQITPS--PELKKA---SSDEEEVISLPTKRKRIRLNPVDSDDSDV 567
++ + E TPS P+ +KA SSDE+EV+S P +KR S+D V
Sbjct: 17 KSAEAENGETPSKAPKRRKAVIISSDEDEVVSPPETKKRKASKTASSEDDVV 68
>BT003618-1|AAO39621.1| 986|Drosophila melanogaster GH06471p
protein.
Length = 986
Score = 29.5 bits (63), Expect = 4.2
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = +1
Query: 427 ENKKRERQITPS--PELKKA---SSDEEEVISLPTKRKRIRLNPVDSDDSDV 567
++ + E TPS P+ +KA SSDE+EV+S P +KR S+D V
Sbjct: 17 KSAEAENGETPSKAPKRRKAVIISSDEDEVVSPPETKKRKASKTASSEDDVV 68
>AY122077-1|AAM52589.1| 1008|Drosophila melanogaster AT18625p
protein.
Length = 1008
Score = 29.5 bits (63), Expect = 4.2
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = +1
Query: 427 ENKKRERQITPS--PELKKA---SSDEEEVISLPTKRKRIRLNPVDSDDSDV 567
++ + E TPS P+ +KA SSDE+EV+S P +KR S+D V
Sbjct: 17 KSAEAENGETPSKAPKRRKAVIISSDEDEVVSPPETKKRKASKTASSEDDVV 68
>AE014297-166|AAF52082.1| 986|Drosophila melanogaster CG1119-PA,
isoform A protein.
Length = 986
Score = 29.5 bits (63), Expect = 4.2
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = +1
Query: 427 ENKKRERQITPS--PELKKA---SSDEEEVISLPTKRKRIRLNPVDSDDSDV 567
++ + E TPS P+ +KA SSDE+EV+S P +KR S+D V
Sbjct: 17 KSAEAENGETPSKAPKRRKAVIISSDEDEVVSPPETKKRKASKTASSEDDVV 68
>AE014297-165|AAX52937.1| 1008|Drosophila melanogaster CG1119-PB,
isoform B protein.
Length = 1008
Score = 29.5 bits (63), Expect = 4.2
Identities = 20/52 (38%), Positives = 29/52 (55%), Gaps = 5/52 (9%)
Frame = +1
Query: 427 ENKKRERQITPS--PELKKA---SSDEEEVISLPTKRKRIRLNPVDSDDSDV 567
++ + E TPS P+ +KA SSDE+EV+S P +KR S+D V
Sbjct: 17 KSAEAENGETPSKAPKRRKAVIISSDEDEVVSPPETKKRKASKTASSEDDVV 68
>AE014296-326|AAF47543.2| 1062|Drosophila melanogaster CG7971-PA,
isoform A protein.
Length = 1062
Score = 29.5 bits (63), Expect = 4.2
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +1
Query: 427 ENKKRERQITPSPELKKASSDEEEVISLPTKRKRIRLNPVDSDDSDVENKADNK 588
+ KKR R+ + SPE KK ++ +K+KR R D + +D +
Sbjct: 228 KRKKRARESSASPERKKKKKSKKHKKESKSKKKRSRKRKHSESGRDSDRDSDEE 281
>AE014296-325|AAZ66051.1| 849|Drosophila melanogaster CG7971-PD,
isoform D protein.
Length = 849
Score = 29.5 bits (63), Expect = 4.2
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +1
Query: 427 ENKKRERQITPSPELKKASSDEEEVISLPTKRKRIRLNPVDSDDSDVENKADNK 588
+ KKR R+ + SPE KK ++ +K+KR R D + +D +
Sbjct: 228 KRKKRARESSASPERKKKKKSKKHKKESKSKKKRSRKRKHSESGRDSDRDSDEE 281
>AE014296-324|AAF47542.2| 1107|Drosophila melanogaster CG7971-PC,
isoform C protein.
Length = 1107
Score = 29.5 bits (63), Expect = 4.2
Identities = 15/54 (27%), Positives = 25/54 (46%)
Frame = +1
Query: 427 ENKKRERQITPSPELKKASSDEEEVISLPTKRKRIRLNPVDSDDSDVENKADNK 588
+ KKR R+ + SPE KK ++ +K+KR R D + +D +
Sbjct: 228 KRKKRARESSASPERKKKKKSKKHKKESKSKKKRSRKRKHSESGRDSDRDSDEE 281
>BT015197-1|AAT94426.1| 954|Drosophila melanogaster RE71183p
protein.
Length = 954
Score = 29.1 bits (62), Expect = 5.6
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +1
Query: 430 NKKRERQITPSPELKKASSDEEEVISLPTKRKRIRLNPVDSDDSDVENKADNK 588
++KR + T E S E+E + P K+++ P DS DSD E + K
Sbjct: 813 SRKRGHKKTRRDEAGDNSDSEDEHV--PKKKRKKAKKPADSSDSDSEASSKRK 863
>AF217651-4|AAF35310.1| 769|Drosophila melanogaster c12.2 protein.
Length = 769
Score = 29.1 bits (62), Expect = 5.6
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +1
Query: 379 PIVMVPRKSSKKGIHLENKKRERQITPSPELKKASSDEEEVISLPTKRKRIRLN 540
P + + KK + KK + Q+ PSP +KK + +E + K ++LN
Sbjct: 331 PYQTMLKPDQKKRVEELLKKLDIQLVPSPSIKKIEAQSQENSLIHIKLDELQLN 384
>AE014298-1328|AAN09251.1| 1386|Drosophila melanogaster CG12149-PA
protein.
Length = 1386
Score = 29.1 bits (62), Expect = 5.6
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +1
Query: 379 PIVMVPRKSSKKGIHLENKKRERQITPSPELKKASSDEEEVISLPTKRKRIRLN 540
P + + KK + KK + Q+ PSP +KK + +E + K ++LN
Sbjct: 331 PYQTMLKPDQKKRVEELLKKLDIQLVPSPSIKKIEAQSQENSLIHIKLDELQLN 384
>AE014296-2238|AAF49848.1| 954|Drosophila melanogaster CG11274-PA
protein.
Length = 954
Score = 29.1 bits (62), Expect = 5.6
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +1
Query: 430 NKKRERQITPSPELKKASSDEEEVISLPTKRKRIRLNPVDSDDSDVENKADNK 588
++KR + T E S E+E + P K+++ P DS DSD E + K
Sbjct: 813 SRKRGHKKTRRDEAGDNSDSEDEHV--PKKKRKKAKKPADSSDSDSEASSKRK 863
>BT016045-1|AAV36930.1| 383|Drosophila melanogaster LP19870p
protein.
Length = 383
Score = 28.7 bits (61), Expect = 7.3
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +2
Query: 401 KAVKKEYILKTKNAKGKLHPHRSLRRLRVMKKKLFHCQLREKE 529
K +KK + ++ K + R+ R+LR +K + F C+L K+
Sbjct: 117 KEIKKTHQTASRTTKSSITTSRAGRQLRSIKNQTFKCELCIKQ 159
>AE014297-989|AAF54415.3| 383|Drosophila melanogaster CG8319-PA
protein.
Length = 383
Score = 28.7 bits (61), Expect = 7.3
Identities = 13/43 (30%), Positives = 24/43 (55%)
Frame = +2
Query: 401 KAVKKEYILKTKNAKGKLHPHRSLRRLRVMKKKLFHCQLREKE 529
K +KK + ++ K + R+ R+LR +K + F C+L K+
Sbjct: 117 KEIKKTHQTASRTTKSSITTSRAGRQLRSIKNQTFKCELCIKQ 159
>BT003619-1|AAO39622.1| 1167|Drosophila melanogaster GH12052p
protein.
Length = 1167
Score = 28.3 bits (60), Expect = 9.7
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +2
Query: 332 NTANE*KIKSGRY*RYRL*WFPEKAVKKEYILKTKNAKGKLHPHRSLRRLR 484
N+ N +SG+Y R W P + +++ ++ A PH +LR+ R
Sbjct: 554 NSTNRMDQESGKYQRVYADWKPSRTLEQTDVVANLQAIADAQPHDALRQHR 604
>AY089552-1|AAL90290.1| 1253|Drosophila melanogaster LD30834p
protein.
Length = 1253
Score = 28.3 bits (60), Expect = 9.7
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 457 PSPEL-KKASSDEEEVISLPTKRKRIRLNPVDSDDSDVENKADNKIGT 597
P PE+ K+ S+ E+VI + +KR+R D+ ++NK KI T
Sbjct: 340 PEPEVEKRIESNAEQVIIIDKPKKRLRKASSKESDTLLDNK--EKINT 385
>AY052127-1|AAK93551.1| 1062|Drosophila melanogaster SD07741p
protein.
Length = 1062
Score = 28.3 bits (60), Expect = 9.7
Identities = 14/54 (25%), Positives = 25/54 (46%)
Frame = +1
Query: 427 ENKKRERQITPSPELKKASSDEEEVISLPTKRKRIRLNPVDSDDSDVENKADNK 588
+ KKR R+ + SPE KK ++ +K+K+ R D + +D +
Sbjct: 228 KRKKRARESSASPERKKKKKSKKHKKESKSKKKKSRKRKHSESGRDSDRDSDEE 281
>AE014297-2213|AAF55319.2| 1298|Drosophila melanogaster CG14896-PA
protein.
Length = 1298
Score = 28.3 bits (60), Expect = 9.7
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +1
Query: 457 PSPEL-KKASSDEEEVISLPTKRKRIRLNPVDSDDSDVENKADNKIGT 597
P PE+ K+ S+ E+VI + +KR+R D+ ++NK KI T
Sbjct: 385 PEPEVEKRIESNAEQVIIIDKPKKRLRKASSKESDTLLDNK--EKINT 430
>AE014296-1190|AAX52757.1| 1644|Drosophila melanogaster CG33556-PA
protein.
Length = 1644
Score = 28.3 bits (60), Expect = 9.7
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +2
Query: 332 NTANE*KIKSGRY*RYRL*WFPEKAVKKEYILKTKNAKGKLHPHRSLRRLR 484
N+ N +SG+Y R W P + +++ ++ A PH +LR+ R
Sbjct: 1031 NSTNRMDQESGKYQRVYADWKPSRTLEQTDVVANLQAIADAQPHDALRQHR 1081
>AB061681-1|BAC76439.1| 1644|Drosophila melanogaster ah1644 protein.
Length = 1644
Score = 28.3 bits (60), Expect = 9.7
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +2
Query: 332 NTANE*KIKSGRY*RYRL*WFPEKAVKKEYILKTKNAKGKLHPHRSLRRLR 484
N+ N +SG+Y R W P + +++ ++ A PH +LR+ R
Sbjct: 1031 NSTNRMDQESGKYQRVYADWKPSRTLEQTDVVANLQAIADAQPHDALRQHR 1081
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,501,441
Number of Sequences: 53049
Number of extensions: 413126
Number of successful extensions: 1740
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 1623
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1732
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2806815600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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