Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_B18
(656 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z77660-3|CAB01171.1| 471|Caenorhabditis elegans Hypothetical pr... 31 0.72
Z73970-3|CAA98242.2| 773|Caenorhabditis elegans Hypothetical pr... 30 1.7
AC024796-10|AAK29896.1| 623|Caenorhabditis elegans Hypothetical... 30 1.7
AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein. 29 2.2
AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp ge... 29 2.2
U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical pr... 29 2.9
AL021172-1|CAA15962.1| 315|Caenorhabditis elegans Hypothetical ... 29 2.9
AF056579-1|AAC78601.1| 315|Caenorhabditis elegans high mobility... 29 2.9
Z93377-9|CAE17792.1| 350|Caenorhabditis elegans Hypothetical pr... 29 3.8
U58748-10|AAB52970.2| 701|Caenorhabditis elegans Hypothetical p... 29 3.8
AF106576-1|AAC78177.2| 664|Caenorhabditis elegans Hypothetical ... 29 3.8
Z49068-5|CAA88863.2| 707|Caenorhabditis elegans Hypothetical pr... 28 5.1
U80447-7|AAB37811.1| 518|Caenorhabditis elegans Hypothetical pr... 28 6.7
U29488-10|AAK93843.1| 813|Caenorhabditis elegans Dnaj domain (p... 28 6.7
AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical ... 28 6.7
Z82274-5|CAB05227.1| 333|Caenorhabditis elegans Hypothetical pr... 27 8.9
U97403-8|AAB52470.1| 720|Caenorhabditis elegans Hypothetical pr... 27 8.9
U64855-1|AAB04980.1| 594|Caenorhabditis elegans Hypothetical pr... 27 8.9
U41992-8|AAA83359.1| 754|Caenorhabditis elegans Hypothetical pr... 27 8.9
>Z77660-3|CAB01171.1| 471|Caenorhabditis elegans Hypothetical
protein F38H4.3 protein.
Length = 471
Score = 31.1 bits (67), Expect = 0.72
Identities = 19/54 (35%), Positives = 29/54 (53%)
Frame = +1
Query: 427 ENKKRERQITPSPELKKASSDEEEVISLPTKRKRIRLNPVDSDDSDVENKADNK 588
E + E +I + ELKKA +E +L + + P S+DSDVE + DN+
Sbjct: 154 EEDRTEAEIDEN-ELKKALKKSDEAPALKGRSGISKEMPSGSEDSDVEVEGDNR 206
>Z73970-3|CAA98242.2| 773|Caenorhabditis elegans Hypothetical
protein C29A12.3a protein.
Length = 773
Score = 29.9 bits (64), Expect = 1.7
Identities = 22/70 (31%), Positives = 30/70 (42%)
Frame = +1
Query: 379 PIVMVPRKSSKKGIHLENKKRERQITPSPELKKASSDEEEVISLPTKRKRIRLNPVDSDD 558
P+ P KSS E KK S KK D + P ++K++ P DSD+
Sbjct: 691 PVNKSPVKSSPIKKEAEKKKGPVASIFSSSTKKNEKDVKVESPSPIRKKKL---PSDSDE 747
Query: 559 SDVENKADNK 588
SD E + K
Sbjct: 748 SDEETSTNKK 757
>AC024796-10|AAK29896.1| 623|Caenorhabditis elegans Hypothetical
protein Y48G1C.7 protein.
Length = 623
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/44 (34%), Positives = 29/44 (65%), Gaps = 2/44 (4%)
Frame = +1
Query: 403 SSKKGIHLEN--KKRERQITPSPELKKASSDEEEVISLPTKRKR 528
S KK +HLE +RE Q++ + E+++ SS +++ I LP ++ +
Sbjct: 392 SRKKNVHLEEMLDERELQVSHTEEIQQPSSSQQQ-IQLPYRKAK 434
>AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.
Length = 1359
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/65 (24%), Positives = 30/65 (46%)
Frame = +1
Query: 394 PRKSSKKGIHLENKKRERQITPSPELKKASSDEEEVISLPTKRKRIRLNPVDSDDSDVEN 573
PRKSSKK + E + E +K S +++V ++ + + S+D D +
Sbjct: 75 PRKSSKKSRKRAKSESESDESDEEEDRKKSKSKKKVDQKKKEKSKKKRTTSSSEDEDSDE 134
Query: 574 KADNK 588
+ + K
Sbjct: 135 EREQK 139
Score = 28.3 bits (60), Expect = 5.1
Identities = 21/65 (32%), Positives = 30/65 (46%)
Frame = +1
Query: 394 PRKSSKKGIHLENKKRERQITPSPELKKASSDEEEVISLPTKRKRIRLNPVDSDDSDVEN 573
P K SKKG+ KK+ + E + S DE+EV K K++ +S+D E
Sbjct: 192 PSKKSKKGL----KKKAKS-----ESESESEDEKEVKKSKKKSKKVVKKESESEDEAPEK 242
Query: 574 KADNK 588
K K
Sbjct: 243 KKTEK 247
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/65 (23%), Positives = 28/65 (43%)
Frame = +1
Query: 397 RKSSKKGIHLENKKRERQITPSPELKKASSDEEEVISLPTKRKRIRLNPVDSDDSDVENK 576
RK SK ++ KK+E+ D +E +K+K + S +S E++
Sbjct: 101 RKKSKSKKKVDQKKKEKSKKKRTTSSSEDEDSDEEREQKSKKKSKKTKKQTSSESSEESE 160
Query: 577 ADNKI 591
+ K+
Sbjct: 161 EERKV 165
>AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp gene
related protein 1 protein.
Length = 1359
Score = 29.5 bits (63), Expect = 2.2
Identities = 16/65 (24%), Positives = 30/65 (46%)
Frame = +1
Query: 394 PRKSSKKGIHLENKKRERQITPSPELKKASSDEEEVISLPTKRKRIRLNPVDSDDSDVEN 573
PRKSSKK + E + E +K S +++V ++ + + S+D D +
Sbjct: 75 PRKSSKKSRKRAKSESESDESDEEEDRKKSKSKKKVDQKKKEKSKKKRTTSSSEDEDSDE 134
Query: 574 KADNK 588
+ + K
Sbjct: 135 EREQK 139
Score = 28.3 bits (60), Expect = 5.1
Identities = 21/65 (32%), Positives = 30/65 (46%)
Frame = +1
Query: 394 PRKSSKKGIHLENKKRERQITPSPELKKASSDEEEVISLPTKRKRIRLNPVDSDDSDVEN 573
P K SKKG+ KK+ + E + S DE+EV K K++ +S+D E
Sbjct: 192 PSKKSKKGL----KKKAKS-----ESESESEDEKEVKKSKKKSKKVVKKESESEDEAPEK 242
Query: 574 KADNK 588
K K
Sbjct: 243 KKTEK 247
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/65 (23%), Positives = 28/65 (43%)
Frame = +1
Query: 397 RKSSKKGIHLENKKRERQITPSPELKKASSDEEEVISLPTKRKRIRLNPVDSDDSDVENK 576
RK SK ++ KK+E+ D +E +K+K + S +S E++
Sbjct: 101 RKKSKSKKKVDQKKKEKSKKKRTTSSSEDEDSDEEREQKSKKKSKKTKKQTSSESSEESE 160
Query: 577 ADNKI 591
+ K+
Sbjct: 161 EERKV 165
>U41992-7|AAA83358.1| 374|Caenorhabditis elegans Hypothetical
protein F32E10.6 protein.
Length = 374
Score = 29.1 bits (62), Expect = 2.9
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +1
Query: 427 ENKKRERQITPSPELKKASSDEEEVISLPTKRKRIRLNPVDSDDSDVENK 576
++KK +R TP E +EEEV+ P K K+ + ++ +VE +
Sbjct: 239 KSKKSKRAETPEEE----DDEEEEVVKTPKKTKKSKRAETPEEEDEVEEE 284
>AL021172-1|CAA15962.1| 315|Caenorhabditis elegans Hypothetical
protein Y17G7A.1 protein.
Length = 315
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/67 (25%), Positives = 33/67 (49%)
Frame = +1
Query: 391 VPRKSSKKGIHLENKKRERQITPSPELKKASSDEEEVISLPTKRKRIRLNPVDSDDSDVE 570
V ++ + + + KRE SP A++++ +++S P KR R R S D+DV
Sbjct: 57 VKNETDSEAVGSSSVKRENSANDSP----ANTNDVDIVSSPVKRGRGRKAKNPSADADVN 112
Query: 571 NKADNKI 591
+ + +
Sbjct: 113 DTGSSPV 119
>AF056579-1|AAC78601.1| 315|Caenorhabditis elegans high mobility
group protein I beta protein.
Length = 315
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/67 (25%), Positives = 33/67 (49%)
Frame = +1
Query: 391 VPRKSSKKGIHLENKKRERQITPSPELKKASSDEEEVISLPTKRKRIRLNPVDSDDSDVE 570
V ++ + + + KRE SP A++++ +++S P KR R R S D+DV
Sbjct: 57 VKNETDSEAVGSSSVKRENSANDSP----ANTNDVDIVSSPVKRGRGRKAKNPSADADVN 112
Query: 571 NKADNKI 591
+ + +
Sbjct: 113 DTGSSPV 119
>Z93377-9|CAE17792.1| 350|Caenorhabditis elegans Hypothetical
protein F13A7.13 protein.
Length = 350
Score = 28.7 bits (61), Expect = 3.8
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Frame = -3
Query: 282 STLL*FEYESYLRLLY*IFIFTYYRAKVYFL---MIYHLTFIFILLSQKST*VKIILITE 112
+T+L +YES R IF+ Y++A FL M++H+ + LL + ++ +
Sbjct: 151 ATVLFSDYESIYRKKLSIFLIIYHQAYAIFLALVMLFHVFPLRNLLGMNA--CGLLFVIP 208
Query: 111 HYYF*RNIN 85
H +F R N
Sbjct: 209 HLFFLRYYN 217
>U58748-10|AAB52970.2| 701|Caenorhabditis elegans Hypothetical
protein ZK180.6 protein.
Length = 701
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +3
Query: 288 NSTGAANTLFNYFTKTPPTNKKLKADATEDTDCNGSPKKQ*KRN 419
N+T A+N FN T P TN+K TE D + +P + +++
Sbjct: 458 NTTPASNLDFNQVTVEPNTNQKPAIIQTEGDDYDTAPLNEDRKD 501
>AF106576-1|AAC78177.2| 664|Caenorhabditis elegans Hypothetical
protein W07E6.1 protein.
Length = 664
Score = 28.7 bits (61), Expect = 3.8
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +1
Query: 400 KSSKKGIHLENK-KRERQITPSPELKKASSDEEEVISLPTKRKRIRLNPVDSDDSDVENK 576
K+++K + +NK + E + E +K + E P K+++ + D DDSD +N
Sbjct: 526 KAAQKSQNKKNKAEAEASESSDDEEEKKNGVEVNGQKKPAKKQQQKKQKADGDDSDDDNN 585
Query: 577 ADNK 588
A K
Sbjct: 586 APMK 589
>Z49068-5|CAA88863.2| 707|Caenorhabditis elegans Hypothetical
protein K01C8.5 protein.
Length = 707
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Frame = +1
Query: 433 KKRERQITPSPELKKASSDEEE---VISLPTKRKRIRLNPVDSDDSDVENKADNK 588
KKR +Q+ + S+EEE + + TKR+R + P+ + + E++ K
Sbjct: 252 KKRRKQMIERESVDSEISEEEEEEEIYNKQTKRRRSQKTPIQHNKNRTESRLHQK 306
>U80447-7|AAB37811.1| 518|Caenorhabditis elegans Hypothetical
protein F55F8.7 protein.
Length = 518
Score = 27.9 bits (59), Expect = 6.7
Identities = 10/34 (29%), Positives = 21/34 (61%)
Frame = +1
Query: 397 RKSSKKGIHLENKKRERQITPSPELKKASSDEEE 498
+K SKK + E K++ +++ ++ K SD+E+
Sbjct: 120 KKLSKKKLKEEKKEKSKKVNKEKKISKTESDDED 153
>U29488-10|AAK93843.1| 813|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 8 protein.
Length = 813
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 312 LFNYFTKTPPTNKKLKADATEDTDCNGSP 398
LF+YF++ P KK K A + D G P
Sbjct: 544 LFSYFSEKPSDIKKRKPKANDVADLTGDP 572
>AC024824-1|AAK85503.1| 679|Caenorhabditis elegans Hypothetical
protein Y55B1BR.3 protein.
Length = 679
Score = 27.9 bits (59), Expect = 6.7
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +1
Query: 394 PRKSSKKGIHLENKKRERQ-ITPSPELKKASSDEEEVISLPTKRKRIRLNPVDSDDSDVE 570
PRKSSKK +E E + + SP KK +S + +K++ + +S D++VE
Sbjct: 523 PRKSSKKSAAVEESDNEEEDVEESP--KKRTSPRKS-----SKKRAAKEESEESSDNEVE 575
Query: 571 NKADN 585
D+
Sbjct: 576 EVEDS 580
>Z82274-5|CAB05227.1| 333|Caenorhabditis elegans Hypothetical
protein JC8.7 protein.
Length = 333
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +1
Query: 406 SKKGIHLENKKRERQITPSPELKKASSDEEEVISLPTK 519
+K+G + K E TP PE+KK + +E+V+ L K
Sbjct: 2 AKRGRKRKVSKDEENTTPEPEMKKKA--DEKVVELDEK 37
>U97403-8|AAB52470.1| 720|Caenorhabditis elegans Hypothetical
protein T10E9.2 protein.
Length = 720
Score = 27.5 bits (58), Expect = 8.9
Identities = 18/69 (26%), Positives = 32/69 (46%)
Frame = +1
Query: 358 KRTLLKIPIVMVPRKSSKKGIHLENKKRERQITPSPELKKASSDEEEVISLPTKRKRIRL 537
KR K + + SS +G +E++ +I + D +E++ KRK+I +
Sbjct: 650 KREAEKRGVDWKDQSSSSEGEDMESETTTERIAGNNWNNMRLKDIKELVRTAAKRKKIDI 709
Query: 538 NPVDSDDSD 564
+ S DSD
Sbjct: 710 SNDSSSDSD 718
>U64855-1|AAB04980.1| 594|Caenorhabditis elegans Hypothetical
protein ZK742.2 protein.
Length = 594
Score = 27.5 bits (58), Expect = 8.9
Identities = 16/72 (22%), Positives = 33/72 (45%)
Frame = +1
Query: 370 LKIPIVMVPRKSSKKGIHLENKKRERQITPSPELKKASSDEEEVISLPTKRKRIRLNPVD 549
+ I +++ + + K + +++K +IT SPE K E+ + + T + L
Sbjct: 356 ISIDDILMVQYAEKLEVDVKSKDESEKITESPEKHKIEMKNEKPVKIKTVPFGLDLKYWG 415
Query: 550 SDDSDVENKADN 585
+ DVE +N
Sbjct: 416 EERKDVEVPKNN 427
>U41992-8|AAA83359.1| 754|Caenorhabditis elegans Hypothetical
protein F32E10.1 protein.
Length = 754
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +1
Query: 403 SSKKGIHLENKKRERQITPSPELKKASSDEEEVISLPTKRKRIR 534
S KG + R++ + +L+ ASSDE+ SL KR ++R
Sbjct: 554 SEPKGSASWMVEENREVDMASDLESASSDEDIDQSLKAKRAKVR 597
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,301,198
Number of Sequences: 27780
Number of extensions: 242474
Number of successful extensions: 1124
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1118
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1465835342
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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