Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_B15
(511 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L06498-1|AAA60286.1| 119|Homo sapiens ribosomal protein S20 pro... 101 1e-21
BC087850-1|AAH87850.1| 119|Homo sapiens ribosomal protein S20 p... 101 1e-21
BC007507-1|AAH07507.1| 119|Homo sapiens ribosomal protein S20 p... 101 1e-21
AB061842-1|BAB79480.1| 119|Homo sapiens ribosomal protein S20 p... 101 1e-21
AB007156-1|BAA25820.1| 60|Homo sapiens ribosomal protein S20 p... 85 1e-16
D25538-1|BAA05021.2| 1088|Homo sapiens KIAA0037 protein. 30 5.4
BC126271-1|AAI26272.1| 1080|Homo sapiens adenylate cyclase 7 pro... 30 5.4
BC101386-1|AAI01387.1| 576|Homo sapiens PLEKHN1 protein protein. 29 7.1
AL645608-8|CAI15570.1| 611|Homo sapiens pleckstrin homology dom... 29 7.1
>L06498-1|AAA60286.1| 119|Homo sapiens ribosomal protein S20
protein.
Length = 119
Score = 101 bits (242), Expect = 1e-21
Identities = 47/49 (95%), Positives = 49/49 (100%)
Frame = +2
Query: 332 GEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIADA 478
GEGSKTWDRFQMRIHKR+IDLHSPSEIVKQITSI+IEPGVEVEVTIADA
Sbjct: 71 GEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
Score = 99.1 bits (236), Expect = 8e-21
Identities = 50/66 (75%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Frame = +1
Query: 133 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 309
KD K E IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI
Sbjct: 4 KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63
Query: 310 TTRKTP 327
TTRKTP
Sbjct: 64 TTRKTP 69
>BC087850-1|AAH87850.1| 119|Homo sapiens ribosomal protein S20
protein.
Length = 119
Score = 101 bits (242), Expect = 1e-21
Identities = 47/49 (95%), Positives = 49/49 (100%)
Frame = +2
Query: 332 GEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIADA 478
GEGSKTWDRFQMRIHKR+IDLHSPSEIVKQITSI+IEPGVEVEVTIADA
Sbjct: 71 GEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
Score = 99.1 bits (236), Expect = 8e-21
Identities = 50/66 (75%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Frame = +1
Query: 133 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 309
KD K E IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI
Sbjct: 4 KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63
Query: 310 TTRKTP 327
TTRKTP
Sbjct: 64 TTRKTP 69
>BC007507-1|AAH07507.1| 119|Homo sapiens ribosomal protein S20
protein.
Length = 119
Score = 101 bits (242), Expect = 1e-21
Identities = 47/49 (95%), Positives = 49/49 (100%)
Frame = +2
Query: 332 GEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIADA 478
GEGSKTWDRFQMRIHKR+IDLHSPSEIVKQITSI+IEPGVEVEVTIADA
Sbjct: 71 GEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
Score = 99.1 bits (236), Expect = 8e-21
Identities = 50/66 (75%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Frame = +1
Query: 133 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 309
KD K E IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI
Sbjct: 4 KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63
Query: 310 TTRKTP 327
TTRKTP
Sbjct: 64 TTRKTP 69
>AB061842-1|BAB79480.1| 119|Homo sapiens ribosomal protein S20
protein.
Length = 119
Score = 101 bits (242), Expect = 1e-21
Identities = 47/49 (95%), Positives = 49/49 (100%)
Frame = +2
Query: 332 GEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGVEVEVTIADA 478
GEGSKTWDRFQMRIHKR+IDLHSPSEIVKQITSI+IEPGVEVEVTIADA
Sbjct: 71 GEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGVEVEVTIADA 119
Score = 99.1 bits (236), Expect = 8e-21
Identities = 50/66 (75%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Frame = +1
Query: 133 KDIEKPQAEVS-PIHRIRITLTSRNVRSLEKVCADLINGAKKQKLRVKGPVRMPTKILRI 309
KD K E IHRIRITLTSRNV+SLEKVCADLI GAK++ L+VKGPVRMPTK LRI
Sbjct: 4 KDTGKTPVEPEVAIHRIRITLTSRNVKSLEKVCADLIRGAKEKNLKVKGPVRMPTKTLRI 63
Query: 310 TTRKTP 327
TTRKTP
Sbjct: 64 TTRKTP 69
>AB007156-1|BAA25820.1| 60|Homo sapiens ribosomal protein S20
protein.
Length = 60
Score = 85.0 bits (201), Expect = 1e-16
Identities = 38/40 (95%), Positives = 40/40 (100%)
Frame = +2
Query: 332 GEGSKTWDRFQMRIHKRVIDLHSPSEIVKQITSINIEPGV 451
GEGSKTWDRFQMRIHKR+IDLHSPSEIVKQITSI+IEPGV
Sbjct: 21 GEGSKTWDRFQMRIHKRLIDLHSPSEIVKQITSISIEPGV 60
Score = 41.5 bits (93), Expect = 0.002
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +1
Query: 271 KGPVRMPTKILRITTRKTP 327
KGPVRMPTK LRITTRKTP
Sbjct: 1 KGPVRMPTKTLRITTRKTP 19
>D25538-1|BAA05021.2| 1088|Homo sapiens KIAA0037 protein.
Length = 1088
Score = 29.9 bits (64), Expect = 5.4
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +3
Query: 72 KSCLSRPEFNKQHGSRC-SVRQRHRETPGRGL-PYSPHQDHSYFSQCALTREGL 227
+ +S E + +G R SV QRHR TP R + P +D SY + EGL
Sbjct: 511 RESVSSGETHVPNGRRPKSVPQRHRRTPDRSMSPKGRSEDDSYDDEMLSAIEGL 564
>BC126271-1|AAI26272.1| 1080|Homo sapiens adenylate cyclase 7
protein.
Length = 1080
Score = 29.9 bits (64), Expect = 5.4
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +3
Query: 72 KSCLSRPEFNKQHGSRC-SVRQRHRETPGRGL-PYSPHQDHSYFSQCALTREGL 227
+ +S E + +G R SV QRHR TP R + P +D SY + EGL
Sbjct: 503 RESVSSGETHVPNGRRPKSVPQRHRRTPDRSMSPKGRSEDDSYDDEMLSAIEGL 556
>BC101386-1|AAI01387.1| 576|Homo sapiens PLEKHN1 protein protein.
Length = 576
Score = 29.5 bits (63), Expect = 7.1
Identities = 27/87 (31%), Positives = 35/87 (40%), Gaps = 4/87 (4%)
Frame = +3
Query: 66 DLKSCLSRPE----FNKQHGSRCSVRQRHRETPGRGLPYSPHQDHSYFSQCALTREGLC* 233
D +SC S P +K+ + QRHR + G P P S REG
Sbjct: 471 DPRSCSSGPAGPYLLSKKGALQSRAAQRHRGSAKDGGPQPPDAPQLVSS----AREGS-- 524
Query: 234 PNQWSQETEAACKGPSPHANQDPAYHH 314
P W T+ G SP ++DP Y H
Sbjct: 525 PEPWLPLTD----GRSPRRSRDPGYDH 547
>AL645608-8|CAI15570.1| 611|Homo sapiens pleckstrin homology domain
containing, family N member 1 protein.
Length = 611
Score = 29.5 bits (63), Expect = 7.1
Identities = 27/87 (31%), Positives = 35/87 (40%), Gaps = 4/87 (4%)
Frame = +3
Query: 66 DLKSCLSRPE----FNKQHGSRCSVRQRHRETPGRGLPYSPHQDHSYFSQCALTREGLC* 233
D +SC S P +K+ + QRHR + G P P S REG
Sbjct: 506 DPRSCSSGPAGPYLLSKKGALQSRAAQRHRGSAKDGGPQPPDAPQLVSS----AREGS-- 559
Query: 234 PNQWSQETEAACKGPSPHANQDPAYHH 314
P W T+ G SP ++DP Y H
Sbjct: 560 PEPWLPLTD----GRSPRRSRDPGYDH 582
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,766,553
Number of Sequences: 237096
Number of extensions: 1819490
Number of successful extensions: 4097
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4092
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4763295768
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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