Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_B11
(654 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin pr... 141 5e-36
AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin pr... 141 5e-36
AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin pr... 129 2e-32
AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin pr... 127 9e-32
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.41
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.41
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.41
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.41
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 25 0.41
AM292344-1|CAL23156.1| 291|Tribolium castaneum gustatory recept... 23 2.9
EF222296-1|ABN79656.2| 403|Tribolium castaneum arginine vasopre... 22 5.1
>AF506023-1|AAM46899.1| 76|Tribolium castaneum polyubiquitin
protein.
Length = 76
Score = 141 bits (341), Expect = 5e-36
Identities = 68/70 (97%), Positives = 69/70 (98%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRL FAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
>AF506022-1|AAM46898.1| 685|Tribolium castaneum polyubiquitin
protein.
Length = 685
Score = 141 bits (341), Expect = 5e-36
Identities = 68/70 (97%), Positives = 69/70 (98%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRL FAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 141 bits (341), Expect = 5e-36
Identities = 68/70 (97%), Positives = 69/70 (98%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRL FAGKQLEDGRTLSDYN
Sbjct: 77 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 136
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 141 bits (341), Expect = 5e-36
Identities = 68/70 (97%), Positives = 69/70 (98%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRL FAGKQLEDGRTLSDYN
Sbjct: 153 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 212
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 141 bits (341), Expect = 5e-36
Identities = 68/70 (97%), Positives = 69/70 (98%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRL FAGKQLEDGRTLSDYN
Sbjct: 229 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 288
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298
Score = 141 bits (341), Expect = 5e-36
Identities = 68/70 (97%), Positives = 69/70 (98%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRL FAGKQLEDGRTLSDYN
Sbjct: 305 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 364
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 365 IQKESTLHLV 374
Score = 141 bits (341), Expect = 5e-36
Identities = 68/70 (97%), Positives = 69/70 (98%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRL FAGKQLEDGRTLSDYN
Sbjct: 457 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 516
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 517 IQKESTLHLV 526
Score = 141 bits (341), Expect = 5e-36
Identities = 68/70 (97%), Positives = 69/70 (98%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRL FAGKQLEDGRTLSDYN
Sbjct: 533 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 592
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 593 IQKESTLHLV 602
Score = 141 bits (341), Expect = 5e-36
Identities = 68/70 (97%), Positives = 69/70 (98%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRL FAGKQLEDGRTLSDYN
Sbjct: 609 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 668
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 669 IQKESTLHLV 678
Score = 138 bits (335), Expect = 3e-35
Identities = 67/70 (95%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQR FAGKQLEDGRTLSDYN
Sbjct: 381 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYN 440
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 441 IQKESTLHLV 450
>AF506021-1|AAM46897.1| 64|Tribolium castaneum polyubiquitin
protein.
Length = 64
Score = 129 bits (312), Expect = 2e-32
Identities = 62/64 (96%), Positives = 63/64 (98%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQRL FAGKQLEDGRTLSDYN
Sbjct: 1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN 60
Query: 447 IQKE 436
IQKE
Sbjct: 61 IQKE 64
>AF506020-1|AAM46896.1| 112|Tribolium castaneum polyubiquitin
protein.
Length = 112
Score = 127 bits (306), Expect = 9e-32
Identities = 61/64 (95%), Positives = 62/64 (96%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP+QQR FAGKQLEDGRTLSDYN
Sbjct: 49 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRSIFAGKQLEDGRTLSDYN 108
Query: 447 IQKE 436
IQKE
Sbjct: 109 IQKE 112
Score = 86.6 bits (205), Expect = 2e-19
Identities = 40/42 (95%), Positives = 41/42 (97%)
Frame = -1
Query: 543 KIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYNIQKESTLHLV 418
KIQDKEGIPP+QQRL FAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 1 KIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 42
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 25.4 bits (53), Expect = 0.41
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 145 LXGTYLFVVVFEXHRAVTLPAVVTVLHHR 231
L GTY ++F +V L VV HHR
Sbjct: 273 LLGTYFNCIMFMVASSVVLTVVVLNYHHR 301
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 25.4 bits (53), Expect = 0.41
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 145 LXGTYLFVVVFEXHRAVTLPAVVTVLHHR 231
L GTY ++F +V L VV HHR
Sbjct: 273 LIGTYFNCIMFMVASSVVLTVVVLNYHHR 301
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 25.4 bits (53), Expect = 0.41
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 145 LXGTYLFVVVFEXHRAVTLPAVVTVLHHR 231
L GTY ++F +V L VV HHR
Sbjct: 273 LLGTYFNCIMFMVASSVVLTVVVLNYHHR 301
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 25.4 bits (53), Expect = 0.41
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 145 LXGTYLFVVVFEXHRAVTLPAVVTVLHHR 231
L GTY ++F +V L VV HHR
Sbjct: 273 LLGTYFNCIMFMVASSVVLTVVVLNYHHR 301
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 25.4 bits (53), Expect = 0.41
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 145 LXGTYLFVVVFEXHRAVTLPAVVTVLHHR 231
L GTY ++F +V L VV HHR
Sbjct: 273 LIGTYFNCIMFMVASSVVLTVVVLNYHHR 301
>AM292344-1|CAL23156.1| 291|Tribolium castaneum gustatory receptor
candidate 23 protein.
Length = 291
Score = 22.6 bits (46), Expect = 2.9
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +2
Query: 254 CSPVHSRRKRWILPFSSTL*NLRTASLTFFFLCLIF 361
C P S + + + FS+T L A +TF + L F
Sbjct: 253 CRPTFSAARFYGIDFSNTFLGLVGAVVTFLIVLLQF 288
>EF222296-1|ABN79656.2| 403|Tribolium castaneum arginine
vasopressin receptor protein.
Length = 403
Score = 21.8 bits (44), Expect = 5.1
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +1
Query: 430 GGFLLDIVVRXGTSIFQLLSS 492
GGFLL VV+ G ++ LSS
Sbjct: 108 GGFLLCKVVKYGQTLGPYLSS 128
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 120,896
Number of Sequences: 336
Number of extensions: 2231
Number of successful extensions: 21
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16865010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -