Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_B11
(654 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g23410.1 68414.m02932 ubiquitin extension protein, putative /... 206 8e-54
At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / ... 204 3e-53
At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / ... 204 4e-53
At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677 135 2e-32
At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to GI:92... 135 2e-32
At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to GI:92... 135 2e-32
At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3) senescence... 135 2e-32
At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3) senescence... 135 2e-32
At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3) senescence... 135 2e-32
At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3) senescence... 135 2e-32
At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3) senescence... 135 2e-32
At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to GI:3... 135 2e-32
At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to GI:1... 135 2e-32
At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to GI:1... 135 2e-32
At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to GI:1... 135 2e-32
At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / ... 135 2e-32
At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / ... 135 2e-32
At2g35635.1 68415.m04370 ubiquitin family protein contains INTER... 135 2e-32
At1g65350.1 68414.m07413 polyubiquitin, putative similar to poly... 135 2e-32
At1g31340.1 68414.m03835 ubiquitin family protein contains INTER... 135 2e-32
At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to poly... 134 5e-32
At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to polyu... 134 6e-32
At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to polyu... 128 4e-30
At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam ... 109 2e-24
At1g11980.1 68414.m01384 ubiquitin family protein similar to Cha... 83 1e-16
At1g53950.1 68414.m06145 ubiquitin family protein contains INTER... 65 3e-11
At5g42220.1 68418.m05139 ubiquitin family protein contains INTER... 63 2e-10
At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative simi... 59 2e-09
At5g38470.1 68418.m04650 DNA repair protein RAD23, putative simi... 53 2e-07
At2g17190.1 68415.m01985 ubiquitin family protein contains INTER... 51 6e-07
At4g02970.1 68417.m00404 ubiquitin family protein contains INTER... 50 1e-06
At2g17200.1 68415.m01986 ubiquitin family protein weak similarit... 50 1e-06
At4g03350.1 68417.m00457 ubiquitin family protein contains INTER... 48 7e-06
At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam ... 48 7e-06
At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam ... 48 7e-06
At3g13235.1 68416.m01666 ubiquitin family protein contains INTER... 47 1e-05
At4g03370.1 68417.m00459 ubiquitin family protein contains INTER... 46 2e-05
At1g79650.3 68414.m09289 DNA repair protein RAD23, putative simi... 46 2e-05
At1g79650.2 68414.m09288 DNA repair protein RAD23, putative simi... 46 2e-05
At1g79650.1 68414.m09287 DNA repair protein RAD23, putative simi... 46 2e-05
At1g16190.1 68414.m01939 DNA repair protein RAD23, putative simi... 46 2e-05
At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC1... 46 3e-05
At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquiti... 44 7e-05
At4g01000.1 68417.m00135 ubiquitin family protein low similarity... 43 2e-04
At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding ... 43 2e-04
At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase fa... 43 2e-04
At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase fa... 43 2e-04
At4g05230.1 68417.m00789 ubiquitin family protein contains INTER... 43 2e-04
At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase fa... 40 0.002
At5g16090.1 68418.m01880 ubiquitin family protein contains INTER... 39 0.003
At1g53980.1 68414.m06149 polyubiquitin-related contains similari... 39 0.003
At3g06455.1 68416.m00747 splicing factor-related contains weak s... 38 0.004
At4g03360.1 68417.m00458 ubiquitin family protein contains INTER... 38 0.006
At4g02950.1 68417.m00402 ubiquitin family protein contains INTER... 38 0.008
At4g05250.1 68417.m00793 ubiquitin family protein contains INTER... 37 0.013
At4g05310.1 68417.m00809 ubiquitin family protein contains INTER... 35 0.041
At4g05270.1 68417.m00797 ubiquitin family protein contains INTER... 35 0.041
At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase fa... 34 0.072
At1g11970.1 68414.m01383 hypothetical protein 33 0.13
At5g14360.1 68418.m01678 ubiquitin family protein contains INTER... 33 0.17
At5g40630.1 68418.m04932 ubiquitin family protein contains INTER... 31 0.51
At5g12280.1 68418.m01444 hypothetical protein 30 1.2
At1g64470.1 68414.m07309 ubiquitin family protein contains INTER... 30 1.2
At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp... 30 1.2
At3g14130.1 68416.m01787 (S)-2-hydroxy-acid oxidase, peroxisomal... 30 1.5
At1g47680.1 68414.m05297 hypothetical protein 30 1.5
At3g14150.1 68416.m01789 (S)-2-hydroxy-acid oxidase, peroxisomal... 29 2.7
At4g18360.1 68417.m02723 (S)-2-hydroxy-acid oxidase, peroxisomal... 28 6.2
At1g22050.1 68414.m02758 ubiquitin family protein contains INTER... 28 6.2
>At1g23410.1 68414.m02932 ubiquitin extension protein, putative /
40S ribosomal protein S27A (RPS27aA) strong similarity
to ubiquitin extension protein (UBQ5) GB:AAA32906
GI:166934 from (Arabidopsis thaliana)
Length = 156
Score = 206 bits (504), Expect = 8e-54
Identities = 103/155 (66%), Positives = 114/155 (73%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 447 IQKESTLHLVXXXXXXXXXXXXKNYSTPXXXXXXXXXXKLAVLRFYKVDENGKIHRLRRE 268
IQKESTLHLV K Y+ P KLAVL+FYKVD +GK+ RL++E
Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHTHKKVKLAVLQFYKVDGSGKVQRLKKE 120
Query: 267 CTGEQCGAGVFMAVMEDRHYCGKCHSTMVFKDDDK 163
C CG G FMA DRHYCGKC +T VFK D+
Sbjct: 121 CPSVSCGPGTFMASHFDRHYCGKCGTTYVFKKADE 155
>At2g47110.1 68415.m05883 ubiquitin extension protein 6 (UBQ6) / 40S
ribosomal protein S27A (RPS27aB) identical to GI:166936
Length = 157
Score = 204 bits (499), Expect = 3e-53
Identities = 102/153 (66%), Positives = 113/153 (73%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 447 IQKESTLHLVXXXXXXXXXXXXKNYSTPXXXXXXXXXXKLAVLRFYKVDENGKIHRLRRE 268
IQKESTLHLV K Y+ P KLAVL+FYKVD +GK+ RLR+E
Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDGSGKVQRLRKE 120
Query: 267 CTGEQCGAGVFMAVMEDRHYCGKCHSTMVFKDD 169
C CGAG FMA DRHYCGKC T V++ +
Sbjct: 121 CPNATCGAGTFMASHFDRHYCGKCGLTYVYQKE 153
>At3g62250.1 68416.m06993 ubiquitin extension protein 5 (UBQ5) / 40S
ribosomal protein S27A (RPS27aC) identical to GI:166933,
GI:166934
Length = 157
Score = 204 bits (498), Expect = 4e-53
Identities = 101/153 (66%), Positives = 113/153 (73%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 447 IQKESTLHLVXXXXXXXXXXXXKNYSTPXXXXXXXXXXKLAVLRFYKVDENGKIHRLRRE 268
IQKESTLHLV K Y+ P KLAVL+FYK+D +GK+ RLR+E
Sbjct: 61 IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKIDGSGKVQRLRKE 120
Query: 267 CTGEQCGAGVFMAVMEDRHYCGKCHSTMVFKDD 169
C CGAG FMA DRHYCGKC T V++ +
Sbjct: 121 CPNATCGAGTFMASHFDRHYCGKCGLTYVYQKE 153
>At5g20620.1 68418.m02449 polyubiquitin (UBQ4) identical to GI:17677
Length = 382
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 365 IQKESTLHLV 374
>At5g03240.2 68418.m00273 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298
>At5g03240.1 68418.m00272 polyubiquitin (UBQ3) identical to
GI:928809
Length = 306
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298
>At4g05320.5 68417.m00814 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 312
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 66.5 bits (155), Expect = 1e-11
Identities = 32/34 (94%), Positives = 33/34 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 526
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 262
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/49 (42%), Positives = 25/49 (51%)
Frame = -2
Query: 548 KLKFKTKRESLPINRG*XLLESSWKMDVPXRTTISRRNPPSTWC*GFVV 402
K K + K L + LESS +MDV TT SRR+ TW FVV
Sbjct: 255 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVV 303
>At4g05320.4 68417.m00813 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 365 IQKESTLHLV 374
Score = 66.5 bits (155), Expect = 1e-11
Identities = 32/34 (94%), Positives = 33/34 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 526
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/49 (42%), Positives = 25/49 (51%)
Frame = -2
Query: 548 KLKFKTKRESLPINRG*XLLESSWKMDVPXRTTISRRNPPSTWC*GFVV 402
K K + K L + LESS +MDV TT SRR+ TW FVV
Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVV 455
>At4g05320.3 68417.m00812 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298
Score = 66.5 bits (155), Expect = 1e-11
Identities = 32/34 (94%), Positives = 33/34 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 526
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/49 (42%), Positives = 25/49 (51%)
Frame = -2
Query: 548 KLKFKTKRESLPINRG*XLLESSWKMDVPXRTTISRRNPPSTWC*GFVV 402
K K + K L + LESS +MDV TT SRR+ TW FVV
Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVV 379
>At4g05320.2 68417.m00811 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 464
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 364
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 365 IQKESTLHLV 374
Score = 66.5 bits (155), Expect = 1e-11
Identities = 32/34 (94%), Positives = 33/34 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 526
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 381 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 414
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/49 (42%), Positives = 25/49 (51%)
Frame = -2
Query: 548 KLKFKTKRESLPINRG*XLLESSWKMDVPXRTTISRRNPPSTWC*GFVV 402
K K + K L + LESS +MDV TT SRR+ TW FVV
Sbjct: 407 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVV 455
>At4g05320.1 68417.m00810 polyubiquitin (UBQ10) (SEN3)
senescence-associated protein; identical to GI:870791
Length = 388
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298
Score = 66.5 bits (155), Expect = 1e-11
Identities = 32/34 (94%), Positives = 33/34 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKE 526
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE
Sbjct: 305 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKE 338
Score = 30.3 bits (65), Expect = 1.2
Identities = 21/49 (42%), Positives = 25/49 (51%)
Frame = -2
Query: 548 KLKFKTKRESLPINRG*XLLESSWKMDVPXRTTISRRNPPSTWC*GFVV 402
K K + K L + LESS +MDV TT SRR+ TW FVV
Sbjct: 331 KAKIQDKEVFLRTSSVSSSLESSLRMDVLWPTTTSRRSLLFTWSCVFVV 379
>At4g05050.1 68417.m00744 polyubiquitin (UBQ11) identical to
GI:304117
Length = 229
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
>At4g02890.3 68417.m00391 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298
>At4g02890.2 68417.m00390 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 229
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
>At4g02890.1 68417.m00389 polyubiquitin (UBQ14) identical to
GI:166795; similar to N. sylvestris hexameric
polyubiquitin, GenBank accession number M74101
Length = 305
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 212
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 289 IQKESTLHLV 298
>At3g52590.1 68416.m05792 ubiquitin extension protein 1 (UBQ1) / 60S
ribosomal protein L40 (RPL40B) identical to GI:166929,
GI:166930
Length = 128
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
>At2g36170.1 68415.m04439 ubiquitin extension protein 2 (UBQ2) / 60S
ribosomal protein L40 (RPL40A) identical to GI:166930,
GI:166931
Length = 128
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
>At2g35635.1 68415.m04370 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 154
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 89.8 bits (213), Expect = 1e-18
Identities = 40/68 (58%), Positives = 53/68 (77%)
Frame = -1
Query: 621 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYNIQ 442
I VKTLTGK I +++EP+DTI+ +K ++++KEGIPP QQRL +AGKQL D +T DY I+
Sbjct: 79 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYAIE 138
Query: 441 KESTLHLV 418
S LHLV
Sbjct: 139 GGSVLHLV 146
>At1g65350.1 68414.m07413 polyubiquitin, putative similar to
polyubiquitin GI:248337 from [Zea mays]
Length = 294
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 132 bits (319), Expect = 2e-31
Identities = 64/70 (91%), Positives = 67/70 (95%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKE IPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 152 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEWIPPDQQRLIFAGKQLEDGRTLADYN 211
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 212 IQKESTLHLV 221
Score = 128 bits (309), Expect = 3e-30
Identities = 64/70 (91%), Positives = 67/70 (95%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+D N
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLAD-N 135
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 136 IQKESTLHLV 145
Score = 97.1 bits (231), Expect = 9e-21
Identities = 47/53 (88%), Positives = 49/53 (92%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDG 469
MQIFVKTLTGKTITLEVE S TI+NVKAKIQDKEGIPP+QQRL FAGKQLE G
Sbjct: 228 MQIFVKTLTGKTITLEVESSGTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEGG 280
>At1g31340.1 68414.m03835 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 156
Score = 135 bits (327), Expect = 2e-32
Identities = 65/70 (92%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 61 IQKESTLHLV 70
Score = 93.1 bits (221), Expect = 1e-19
Identities = 41/68 (60%), Positives = 54/68 (79%)
Frame = -1
Query: 621 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYNIQ 442
I VKTLTGK I +++EP+DTI+ +K ++++KEGIPP QQRL +AGKQL D +T DYNI+
Sbjct: 79 IKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIE 138
Query: 441 KESTLHLV 418
S LHLV
Sbjct: 139 GGSVLHLV 146
>At1g55060.1 68414.m06289 polyubiquitin (UBQ12) identical to
polyubiquitin (ubq12) gene sequence GI:304121 from
[Arabidopsis thaliana]
Length = 230
Score = 134 bits (324), Expect = 5e-32
Identities = 64/70 (91%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+N+KAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 77 MQIFVKTLTGKTITLEVESSDTIDNLKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 136
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 137 IQKESTLHLV 146
Score = 129 bits (312), Expect = 1e-30
Identities = 63/70 (90%), Positives = 66/70 (94%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEGI P+QQRL FAGKQ EDGRTL+DYN
Sbjct: 153 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGISPDQQRLIFAGKQHEDGRTLADYN 212
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 213 IQKESTLHLV 222
Score = 120 bits (288), Expect = 1e-27
Identities = 56/70 (80%), Positives = 64/70 (91%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIF+KTLTGKT LEVE SDTI+NVKAKIQD EGIPP+Q RL FAGKQLEDGRTL+DYN
Sbjct: 1 MQIFLKTLTGKTKVLEVESSDTIDNVKAKIQDIEGIPPDQHRLIFAGKQLEDGRTLADYN 60
Query: 447 IQKESTLHLV 418
+Q++STLHL+
Sbjct: 61 VQEDSTLHLL 70
>At5g37640.1 68418.m04533 polyubiquitin (UBQ9) identical to
polyubiquitin (ubq9) gene sequence GI:304120 from
[Arabidopsis thaliana]
Length = 322
Score = 134 bits (323), Expect = 6e-32
Identities = 63/70 (90%), Positives = 68/70 (97%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVKTLTGKTITLEVE SDTI+NVKAKIQDKEG+PP+QQRL FAGKQL+DGRTL+DYN
Sbjct: 79 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGVPPDQQRLIFAGKQLDDGRTLADYN 138
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 139 IQKESTLHLV 148
Score = 127 bits (306), Expect = 7e-30
Identities = 61/70 (87%), Positives = 65/70 (92%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFV+TLT KTI LEVE SDT +NVKAKIQDKEGIPP+QQRL FAGKQLEDGRTL+DYN
Sbjct: 155 MQIFVRTLTRKTIALEVESSDTTDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 214
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 215 IQKESTLHLV 224
Score = 118 bits (284), Expect = 3e-27
Identities = 60/71 (84%), Positives = 64/71 (90%), Gaps = 1/71 (1%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDG-RTLSDY 451
MQIFV TLTGKTITLEVE SDTI+NVKAKIQDKE I P+QQRL FAG+QLEDG TL+DY
Sbjct: 231 MQIFVNTLTGKTITLEVESSDTIDNVKAKIQDKERIQPDQQRLIFAGEQLEDGYYTLADY 290
Query: 450 NIQKESTLHLV 418
NIQKESTLHLV
Sbjct: 291 NIQKESTLHLV 301
Score = 103 bits (246), Expect = 1e-22
Identities = 50/71 (70%), Positives = 59/71 (83%)
Frame = -1
Query: 633 VKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSD 454
+ MQI KTLT KTIT++V SDTI NVKAKIQD EGIP +QQRL F+GK L+DGRTL+D
Sbjct: 1 MSMQIHAKTLTEKTITIDVVSSDTINNVKAKIQDIEGIPLDQQRLIFSGKLLDDGRTLAD 60
Query: 453 YNIQKESTLHL 421
Y+IQK+S LHL
Sbjct: 61 YSIQKDSILHL 71
>At3g09790.1 68416.m01163 polyubiquitin (UBQ8) identical to
polyubiquitin (ubq8) GI:870793, GB:L05917 [Arabidopsis
thaliana] (Genetics 139 (2), 921-939 (1995))
Length = 631
Score = 128 bits (308), Expect = 4e-30
Identities = 62/70 (88%), Positives = 66/70 (94%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFV+TLTGKTITLEV+ SDTI+NVKAKIQDKEGI P QQRL FAGKQLEDGRTL+DYN
Sbjct: 79 MQIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEGILPRQQRLIFAGKQLEDGRTLADYN 138
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 139 IQKESTLHLV 148
Score = 115 bits (277), Expect = 2e-26
Identities = 56/70 (80%), Positives = 63/70 (90%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
+QI+ KTLT KTITL+VE SD+I NVKAKIQ+KEGIP +QQRL FAGKQLEDG TL+DYN
Sbjct: 3 IQIYAKTLTEKTITLDVETSDSIHNVKAKIQNKEGIPLDQQRLIFAGKQLEDGLTLADYN 62
Query: 447 IQKESTLHLV 418
IQKESTLHLV
Sbjct: 63 IQKESTLHLV 72
Score = 105 bits (251), Expect = 3e-23
Identities = 55/75 (73%), Positives = 60/75 (80%), Gaps = 2/75 (2%)
Frame = -1
Query: 636 RVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGI--PPNQQRLXFAGKQLEDGRT 463
R MQIFVKTLT K I LEVE DTIENVKA +QDKEGI PN QRL F GK+L+DG T
Sbjct: 316 RCGMQIFVKTLTRKRINLEVESWDTIENVKAMVQDKEGIQPQPNLQRLIFLGKELKDGCT 375
Query: 462 LSDYNIQKESTLHLV 418
L+DY+IQKESTLHLV
Sbjct: 376 LADYSIQKESTLHLV 390
Score = 104 bits (250), Expect = 4e-23
Identities = 52/70 (74%), Positives = 58/70 (82%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIF+KTLTGKTI LEVE SDTI NVK KIQ KEGI P+QQ L F G+QLEDG TL DY+
Sbjct: 552 MQIFIKTLTGKTIILEVESSDTIANVKEKIQVKEGIKPDQQMLIFFGQQLEDGVTLGDYD 611
Query: 447 IQKESTLHLV 418
I K+STL+LV
Sbjct: 612 IHKKSTLYLV 621
Score = 100 bits (240), Expect = 7e-22
Identities = 50/69 (72%), Positives = 55/69 (79%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
MQIFVK GK ITLEV SDTI++VKAKIQDK G PP+QQ L F G QL+DGRTL DYN
Sbjct: 393 MQIFVKLFGGKIITLEVLSSDTIKSVKAKIQDKVGSPPDQQILLFRGGQLQDGRTLGDYN 452
Query: 447 IQKESTLHL 421
I+ ESTLHL
Sbjct: 453 IRNESTLHL 461
Score = 90.6 bits (215), Expect = 8e-19
Identities = 50/78 (64%), Positives = 56/78 (71%), Gaps = 5/78 (6%)
Frame = -1
Query: 636 RVKMQIFVKTL-----TGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLED 472
R M IFVK L TG+ LEVE SDTI+NVKAK+QDKE IP + RL FAGK LE
Sbjct: 235 RGDMYIFVKNLPYNSFTGENFILEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEG 294
Query: 471 GRTLSDYNIQKESTLHLV 418
GRTL+ YNIQK STL+LV
Sbjct: 295 GRTLAHYNIQKGSTLYLV 312
Score = 87.0 bits (206), Expect = 1e-17
Identities = 47/76 (61%), Positives = 57/76 (75%), Gaps = 7/76 (9%)
Frame = -1
Query: 627 MQIFVKTLTGK-----TITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQL--EDG 469
MQIFV T +GK T+TL+VE SDTIENVKAKIQD+EG+ P+ QRL F G++L ED
Sbjct: 155 MQIFVSTFSGKNFTSDTLTLKVESSDTIENVKAKIQDREGLRPDHQRLIFHGEELFTEDN 214
Query: 468 RTLSDYNIQKESTLHL 421
RTL+DY I+ STL L
Sbjct: 215 RTLADYGIRNRSTLCL 230
Score = 86.6 bits (205), Expect = 1e-17
Identities = 48/75 (64%), Positives = 53/75 (70%), Gaps = 7/75 (9%)
Frame = -1
Query: 627 MQIFVKTL-------TGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDG 469
MQIFVKT T KTITLEVE SDTI+NVK KIQ K GIP ++QRL F G+ L
Sbjct: 469 MQIFVKTFSFSGETPTCKTITLEVESSDTIDNVKVKIQHKVGIPLDRQRLIFGGRVLVGS 528
Query: 468 RTLSDYNIQKESTLH 424
RTL DYNIQK ST+H
Sbjct: 529 RTLLDYNIQKGSTIH 543
>At1g53930.1 68414.m06139 ubiquitin family protein contains Pfam
profile: PF00240 ubiquitin family
Length = 158
Score = 109 bits (261), Expect = 2e-24
Identities = 51/70 (72%), Positives = 59/70 (84%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
M IF+KTLTG+ I LEVE DTIEN+KAKIQDK+GIP +QQRL F GKQLEDG TL+DYN
Sbjct: 86 MFIFIKTLTGRRIVLEVENCDTIENIKAKIQDKQGIPVDQQRLIFKGKQLEDGLTLADYN 145
Query: 447 IQKESTLHLV 418
IQ +S LHL+
Sbjct: 146 IQNDSILHLI 155
>At1g11980.1 68414.m01384 ubiquitin family protein similar to Chain
A, Structure Of Ubiquitin-Like Protein, Rub1 GI:6729726
from [Arabidopsis thaliana]
Length = 78
Score = 83.4 bits (197), Expect = 1e-16
Identities = 38/70 (54%), Positives = 51/70 (72%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
M+I VKTLT K I +E+E +DTIE +K +I++KEGIPP QR+ + GKQL D T YN
Sbjct: 1 MEIKVKTLTEKQIDIEIELTDTIERIKERIEEKEGIPPVHQRIVYTGKQLADDLTAKHYN 60
Query: 447 IQKESTLHLV 418
+++ S LHLV
Sbjct: 61 LERGSVLHLV 70
>At1g53950.1 68414.m06145 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 216
Score = 65.3 bits (152), Expect = 3e-11
Identities = 32/69 (46%), Positives = 47/69 (68%)
Frame = -1
Query: 633 VKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSD 454
V M+IFV T+ KT LEV+ SDTI+ +K+ I D+ G P +QQ L G +L++ T+SD
Sbjct: 139 VLMRIFVSTIKEKTFILEVKGSDTIKKLKSMIHDQGGPPVDQQDLNHLGTKLKNNATISD 198
Query: 453 YNIQKESTL 427
YNI+ ++ L
Sbjct: 199 YNIKPDANL 207
Score = 64.5 bits (150), Expect = 6e-11
Identities = 30/48 (62%), Positives = 37/48 (77%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGK 484
M IF+KTLTG+T T EV+ SDTI +KAK ++KEGIP QQRL F G+
Sbjct: 50 MMIFIKTLTGRTNTYEVKGSDTIRELKAKHEEKEGIPVEQQRLIFQGR 97
Score = 28.3 bits (60), Expect = 4.7
Identities = 14/27 (51%), Positives = 17/27 (62%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVK 547
M I +KTL GK I LEVE S ++K
Sbjct: 1 MHISIKTLEGKRIKLEVEDSSNTIDLK 27
>At5g42220.1 68418.m05139 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 879
Score = 62.9 bits (146), Expect = 2e-10
Identities = 27/70 (38%), Positives = 45/70 (64%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
+++ +KTL +T T +V ++T+ K KI + G+P QQRL F G+ L+D LS+Y+
Sbjct: 24 LELNIKTLDSRTYTFQVNKNETVLLFKEKIASETGVPVGQQRLIFRGRVLKDDHPLSEYH 83
Query: 447 IQKESTLHLV 418
++ TLHL+
Sbjct: 84 LENGHTLHLI 93
>At4g12570.1 68417.m01983 ubiquitin-protein ligase, putative similar
to SP|P39940 Ubiquitin--protein ligase RSP5 (EC 6.3.2.-)
{Saccharomyces cerevisiae}; contains Pfam profiles
PF00240: Ubiquitin family, PF00632: HECT-domain
(ubiquitin-transferase)
Length = 873
Score = 59.3 bits (137), Expect = 2e-09
Identities = 28/72 (38%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Frame = -1
Query: 630 KMQIFVKTLTG-KTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSD 454
++QIFV+ ++G KTI + E DT+E + +I+ K IP +QR+ + GKQL+ +L+
Sbjct: 94 RLQIFVRMMSGGKTIVIHAEKYDTVEKLHQRIEWKTKIPALEQRVIYKGKQLQRENSLTY 153
Query: 453 YNIQKESTLHLV 418
Y+I+++++L LV
Sbjct: 154 YSIEQDASLQLV 165
>At5g38470.1 68418.m04650 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform I GI:1914683 from [Daucus carota]
Length = 378
Score = 52.8 bits (121), Expect = 2e-07
Identities = 27/67 (40%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPNQQRLXFAGKQLEDGRTLSD 454
M+IFVKTL+G +EV+P+D + +VK I+ +G P +Q L GK L+D TL +
Sbjct: 1 MKIFVKTLSGSNFEIEVKPADKVSDVKTAIETVKGAEYPAAKQMLIHQGKVLKDETTLEE 60
Query: 453 YNIQKES 433
N+ + S
Sbjct: 61 NNVVENS 67
>At2g17190.1 68415.m01985 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 538
Score = 51.2 bits (117), Expect = 6e-07
Identities = 23/72 (31%), Positives = 39/72 (54%)
Frame = -1
Query: 633 VKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSD 454
V + + V+ G ++ T+E+ K I +P NQQRL + G+ L+D +TL
Sbjct: 16 VAVAVNVRCSNGTKFSVTTSLDSTVESFKELIAQNSDVPANQQRLIYKGRILKDDQTLLS 75
Query: 453 YNIQKESTLHLV 418
Y +Q + T+H+V
Sbjct: 76 YGLQADHTVHMV 87
>At4g02970.1 68417.m00404 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 270
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/69 (36%), Positives = 40/69 (57%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
M +++ T TG + ++ ++ +T+ +K KI+ +GIP ++Q L GK LED DY
Sbjct: 1 MNVYIDTETGSSFSITIDFGETVLEIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 447 IQKESTLHL 421
I ES L L
Sbjct: 61 ILFESRLLL 69
>At2g17200.1 68415.m01986 ubiquitin family protein weak similarity
to PLIC-2 (ubiquitin-like type II) [Homo sapiens]
GI:9937505; contains Pfam profiles PF00240: Ubiquitin
family, PF00627: UBA/TS-N domain
Length = 551
Score = 50.4 bits (115), Expect = 1e-06
Identities = 20/66 (30%), Positives = 37/66 (56%)
Frame = -1
Query: 615 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYNIQKE 436
++ G +++ T+E+ K + +P NQQRL + G+ L+D +TL Y +Q +
Sbjct: 22 IRCSNGTKFSVKTSLDSTVESFKELVAQSSDVPANQQRLIYKGRILKDDQTLLSYGLQAD 81
Query: 435 STLHLV 418
T+H+V
Sbjct: 82 HTIHMV 87
>At4g03350.1 68417.m00457 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 263
Score = 47.6 bits (108), Expect = 7e-06
Identities = 24/67 (35%), Positives = 38/67 (56%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
M + + T TG + ++ ++ +T+ +K KI+ +GIP ++Q L GK LED DY
Sbjct: 1 MNVDIDTETGSSFSITIDFGETVLQIKEKIEKSQGIPVSKQILYLDGKALEDDLHKIDYM 60
Query: 447 IQKESTL 427
I ES L
Sbjct: 61 ILFESLL 67
>At3g02540.2 68416.m00243 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 299
Score = 47.6 bits (108), Expect = 7e-06
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLXFAGKQLEDGRTLS 457
M+IFVKTL G +EV+P D++ +VK I+ +G P +Q L GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 456 DYNIQKES 433
+ + + S
Sbjct: 61 ENKVAENS 68
>At3g02540.1 68416.m00242 ubiquitin family protein contains Pfam
profiles PF00240: Ubiquitin family, PF00627: UBA/TS-N
domain;
Length = 419
Score = 47.6 bits (108), Expect = 7e-06
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLXFAGKQLEDGRTLS 457
M+IFVKTL G +EV+P D++ +VK I+ +G P +Q L GK L+D T+
Sbjct: 1 MKIFVKTLKGTHFEIEVKPEDSVVDVKKNIESVQGADVYPAAKQMLIHQGKVLKDETTIE 60
Query: 456 DYNIQKES 433
+ + + S
Sbjct: 61 ENKVAENS 68
>At3g13235.1 68416.m01666 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 414
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/70 (31%), Positives = 42/70 (60%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
M+I V T + ITL+V+ +T+ENVKA ++ + +P QQ+L + G ++ + LS
Sbjct: 1 MRITVMTAGEQIITLDVDSQETVENVKALLEVESNVPIQQQQLLYNGNEMGNSDKLSALG 60
Query: 447 IQKESTLHLV 418
++ + L ++
Sbjct: 61 VKDDDLLMMM 70
>At4g03370.1 68417.m00459 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 295
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/69 (31%), Positives = 41/69 (59%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
M++ V+ +G T ++++ DT+ K KI+ + IP ++Q + F GK LED + +++
Sbjct: 1 MKMTVENESGSTFSIDIGLQDTVLTFKRKIEMTQRIPVSRQTIFFQGKLLEDHLDIFEWD 60
Query: 447 IQKESTLHL 421
I + LHL
Sbjct: 61 ILQNPLLHL 69
>At1g79650.3 68414.m09289 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 351
Score = 46.4 bits (105), Expect = 2e-05
Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLXFAGKQLEDGRTLS 457
M++ VKTL G + V PSDTI VK I+D +G P QQ L GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 456 DYNIQKESTL 427
+ + +E L
Sbjct: 61 ENKVTEEGFL 70
>At1g79650.2 68414.m09288 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 365
Score = 46.4 bits (105), Expect = 2e-05
Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLXFAGKQLEDGRTLS 457
M++ VKTL G + V PSDTI VK I+D +G P QQ L GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 456 DYNIQKESTL 427
+ + +E L
Sbjct: 61 ENKVTEEGFL 70
>At1g79650.1 68414.m09287 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota];
contains Pfam profiles PF00240: Ubiquitin family,
PF00627: UBA/TS-N domain
Length = 371
Score = 46.4 bits (105), Expect = 2e-05
Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLXFAGKQLEDGRTLS 457
M++ VKTL G + V PSDTI VK I+D +G P QQ L GK L+D +L
Sbjct: 1 MKLTVKTLKGSHFEIRVLPSDTIMAVKKNIEDSQGKDNYPCGQQLLIHNGKVLKDETSLV 60
Query: 456 DYNIQKESTL 427
+ + +E L
Sbjct: 61 ENKVTEEGFL 70
>At1g16190.1 68414.m01939 DNA repair protein RAD23, putative similar
to DNA repair by nucleotide excision (NER) RAD23
protein, isoform II GI:1914685 from [Daucus carota]
Length = 368
Score = 46.4 bits (105), Expect = 2e-05
Identities = 28/70 (40%), Positives = 38/70 (54%), Gaps = 3/70 (4%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQD---KEGIPPNQQRLXFAGKQLEDGRTLS 457
M++ VKTL G + V P+DTI VK I+D K+ P QQ L GK L+D TL
Sbjct: 1 MKLTVKTLKGSHFEIRVLPTDTIMAVKKNIEDSQSKDNYPCGQQLLIHNGKVLKDETTLV 60
Query: 456 DYNIQKESTL 427
+ + +E L
Sbjct: 61 ENKVTEEGFL 70
>At1g32750.1 68414.m04038 HAC13 protein (HAC13) identical to HAC13
[Arabidopsis thaliana] gi|21105767|gb|AAM34782; contains
Pfam domains, PF00439: Bromodomain and PF00240:
Ubiquitin family
Length = 1919
Score = 45.6 bits (103), Expect = 3e-05
Identities = 23/74 (31%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Frame = -1
Query: 636 RVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQ-RLXFAGKQLEDGRTL 460
R M+I VK+L GK L V +++ +++AK K + ++ + GK+L+D ++L
Sbjct: 658 RGSMKIIVKSLGGKGSKLHVGIEESVSSLRAKASRKLDFKETEAVKMFYKGKELDDEKSL 717
Query: 459 SDYNIQKESTLHLV 418
+ N+Q S +HL+
Sbjct: 718 AAQNVQPNSLVHLI 731
>At5g09340.1 68418.m01082 ubiquitin, putative similar to ubiquitin
SP:P42740 from [Aglaothamnion neglectum]
Length = 79
Score = 44.4 bits (100), Expect = 7e-05
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGK---QLEDGRTLS 457
MQ+F+ GK +EVE + TI ++K KI D G+ Q L GK ++ G T+
Sbjct: 1 MQVFIIDEDGKKYCVEVEKTTTIADMKTKIYDATGMENAYQYLEHRGKIVLEVHGGTTMD 60
Query: 456 DYNIQKESTLHL 421
DY I+ H+
Sbjct: 61 DYKIKACDIFHM 72
>At4g01000.1 68417.m00135 ubiquitin family protein low similarity to
SP|P13117 Ubiquitin. {Neurospora crassa}; contains Pfam
profile PF00240: Ubiquitin family
Length = 415
Score = 43.2 bits (97), Expect = 2e-04
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVE-PSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDY 451
+Q FV+ L GK++TL P E +K +I ++ IP + QRL G Q+ DG +S
Sbjct: 9 LQFFVRLLDGKSLTLSFSSPLAYGEQIKQRIFEQTKIPTHLQRLISGGYQISDGSAIS-- 66
Query: 450 NIQKESTLHLV 418
Q ++T++LV
Sbjct: 67 --QPDATVNLV 75
>At3g19040.1 68416.m02418 ubiquitin family protein / DNA-binding
bromodomain-containing protein low similarity to
SP|P51123 Transcription initiation factor TFIID 230 kDa
subunit {Drosophila melanogaster}; contains Pfam
profiles: PF00439 bromodomain, PF00240: Ubiquitin family
Length = 1700
Score = 43.2 bits (97), Expect = 2e-04
Identities = 22/71 (30%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQ-RLXFAGKQLEDGRTLSDY 451
M+I + L GK L V +++ ++KAK K + ++ + GK+LED ++L++
Sbjct: 500 MKIKLSNLGGKGSLLTVGREESVSSLKAKASRKLDFKETEAVKMFYMGKELEDEKSLAEQ 559
Query: 450 NIQKESTLHLV 418
N+Q S +HL+
Sbjct: 560 NVQPNSLVHLL 570
>At2g46500.2 68415.m05791 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = -1
Query: 615 VKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPNQQRLXFAGKQLEDGRTLSDYNIQ 442
VKT GK VE I VK +I K G + P++Q + + G++LED ++D
Sbjct: 115 VKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRN 174
Query: 441 KESTLHLV 418
+S LHL+
Sbjct: 175 DDSVLHLL 182
>At2g46500.1 68415.m05790 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 566
Score = 43.2 bits (97), Expect = 2e-04
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = -1
Query: 615 VKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPNQQRLXFAGKQLEDGRTLSDYNIQ 442
VKT GK VE I VK +I K G + P++Q + + G++LED ++D
Sbjct: 115 VKTTCGKHCRFHVERGRNIGYVKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRN 174
Query: 441 KESTLHLV 418
+S LHL+
Sbjct: 175 DDSVLHLL 182
>At4g05230.1 68417.m00789 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 206
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/69 (31%), Positives = 36/69 (52%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
M +F +T +G T +E+ DT+ +K KI+ + IP ++Q L F G L+D +
Sbjct: 1 MDVFFETRSGSTFEIELGYWDTVLEIKQKIEKYQRIPVSKQTLLFQGNVLQDHLDIEQCV 60
Query: 447 IQKESTLHL 421
I S + L
Sbjct: 61 ILNHSRIQL 69
>At5g24240.1 68418.m02852 phosphatidylinositol 3- and 4-kinase
family protein / ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain, Pfam profile
PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 574
Score = 39.5 bits (88), Expect = 0.002
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Frame = -1
Query: 621 IFVKTLTGKTITLEVEPSDTIENVKAKIQDKE---GIPPNQQRLXFAGKQLEDGRTLSDY 451
I V+T+ GK L VE S + VK +I KE GIP + + L G++L+D R ++D
Sbjct: 111 ISVRTVDGKEFELVVERSRNVGYVKQQIASKEKELGIPRDHE-LTLDGEELDDQRLITDL 169
Query: 450 NIQKESTLHLV 418
++ +HL+
Sbjct: 170 CQNGDNVIHLL 180
>At5g16090.1 68418.m01880 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 142
Score = 39.1 bits (87), Expect = 0.003
Identities = 23/73 (31%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG---IPPNQQRLXFAGKQLEDGRTLS 457
M+I VKTL G +EV+P+D++ VK I+ G P QQ L ++L D T+
Sbjct: 1 MKIIVKTLKGIRFEIEVKPNDSVAEVKKNIETVMGASEYPAAQQILIHKREKLRDETTME 60
Query: 456 DYNIQKESTLHLV 418
+ +S + ++
Sbjct: 61 ANKVFDKSVIAII 73
>At1g53980.1 68414.m06149 polyubiquitin-related contains similarity
to polyubiquitin GI:166336 from (Aglaothamnion
neglectum)
Length = 91
Score = 39.1 bits (87), Expect = 0.003
Identities = 20/38 (52%), Positives = 25/38 (65%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPP 514
M IFV TL GKT LEV+ S+ I+ VK I D+ +PP
Sbjct: 49 MSIFVSTLKGKTFNLEVKGSEIIQQVKNMIHDQ--VPP 84
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVK 547
M+I +KT GKTI LE+E S ++K
Sbjct: 1 MKILIKTEKGKTINLELEDSSETIDIK 27
>At3g06455.1 68416.m00747 splicing factor-related contains weak
similarity to Swiss-Prot:Q12874 splicing factor 3A
subunit 3 (Spliceosome associated protein 61, SAP 61,
SF3a60) [Homo sapiens]
Length = 366
Score = 38.3 bits (85), Expect = 0.004
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 1/71 (1%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEV-EPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDY 451
+Q FV+ L GK++TL P E +K +I ++ IP + QRL G Q+ +S
Sbjct: 9 LQFFVRLLDGKSVTLTFSSPIACGEQIKQRIFEQTKIPTHLQRLISGGFQIPGASAIS-- 66
Query: 450 NIQKESTLHLV 418
Q ++T++LV
Sbjct: 67 --QSDTTMNLV 75
>At4g03360.1 68417.m00458 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 284
Score = 37.9 bits (84), Expect = 0.006
Identities = 19/69 (27%), Positives = 38/69 (55%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
+++ ++ +G + T++V DT+ +K KI+ +G P ++Q L F K L+D +
Sbjct: 2 IKVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 61
Query: 447 IQKESTLHL 421
I+ S + L
Sbjct: 62 IRHNSRILL 70
>At4g02950.1 68417.m00402 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 37.5 bits (83), Expect = 0.008
Identities = 19/69 (27%), Positives = 37/69 (53%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYN 448
+ + ++ +G + T++V DT+ +K KI+ +G P ++Q L F K L+D +
Sbjct: 36 ISVIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTPVSKQILIFKRKVLQDHLNMFGCQ 95
Query: 447 IQKESTLHL 421
I+ S + L
Sbjct: 96 IRHNSRILL 104
>At4g05250.1 68417.m00793 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 318
Score = 36.7 bits (81), Expect = 0.013
Identities = 18/52 (34%), Positives = 30/52 (57%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLED 472
M +F +T +G +E+ DT+ +K KI+ + IP ++Q L F G L+D
Sbjct: 1 MDVFFETQSGDKFEIELGYWDTMLEIKEKIEKYQCIPVSKQTLIFQGVVLQD 52
>At4g05310.1 68417.m00809 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 415
Score = 35.1 bits (77), Expect = 0.041
Identities = 17/47 (36%), Positives = 28/47 (59%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAG 487
M+ V+ L G + +EVE +DT+ VK KI+ + +P ++Q L G
Sbjct: 1 MKFVVEILGGSSFEIEVERTDTLLVVKQKIEKSQRVPVSKQTLIVDG 47
>At4g05270.1 68417.m00797 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 129
Score = 35.1 bits (77), Expect = 0.041
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = -1
Query: 627 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAG 487
M+ V+ L G + LEV+ DT+ VK KI+ + IP ++Q L G
Sbjct: 1 MKFLVENLNGSSFELEVDYRDTLLVVKQKIERSQHIPVSKQTLIVDG 47
>At1g26270.1 68414.m03205 phosphatidylinositol 3- and 4-kinase
family protein similar to phosphatidylinositol 4-kinase
type-II beta [Homo sapiens] GI:20159767; contains Pfam
profile PF00454: Phosphatidylinositol 3- and 4-kinase
Length = 630
Score = 34.3 bits (75), Expect = 0.072
Identities = 18/56 (32%), Positives = 29/56 (51%)
Frame = -1
Query: 630 KMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRT 463
+ ++FV+T TG + LE++ SD VK K+Q P + L F L++ T
Sbjct: 40 RRRVFVQTETGCVLGLELDRSDNAHTVKRKLQVALNFPIEESSLTFGDLVLKNDLT 95
>At1g11970.1 68414.m01383 hypothetical protein
Length = 99
Score = 33.5 bits (73), Expect = 0.13
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = -1
Query: 636 RVKMQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIP 517
R + ++ + L+ K I +E++P D IE +K I+++ GIP
Sbjct: 40 RQRFKVKSQFLSEKKIDIEIDPMDKIEQIKEGIEEEIGIP 79
>At5g14360.1 68418.m01678 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 163
Score = 33.1 bits (72), Expect = 0.17
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = -1
Query: 585 LEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLED 472
L +E + T +K + G+ P QQRL F GK+ ED
Sbjct: 83 LSIEATSTFGELKMVLSLLTGLEPKQQRLVFKGKERED 120
>At5g40630.1 68418.m04932 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 165
Score = 31.5 bits (68), Expect = 0.51
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = -1
Query: 615 VKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLXFAGKQLED 472
V T++ + + ++ + T +K I GI +QRL F GK+ ED
Sbjct: 83 VSTVSQLSYEISIDANSTFGELKMMIAIVSGIEAKEQRLLFRGKERED 130
>At5g12280.1 68418.m01444 hypothetical protein
Length = 419
Score = 30.3 bits (65), Expect = 1.2
Identities = 15/52 (28%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = -1
Query: 597 KTITLEVEP-SDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYNI 445
K + + V+ S+ + ++K KI + P N+Q+L L+D +L+ YN+
Sbjct: 357 KVVKITVQSLSENVASLKEKISGEIQFPTNKQKLRGKAGFLKDNTSLAHYNV 408
>At1g64470.1 68414.m07309 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 213
Score = 30.3 bits (65), Expect = 1.2
Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Frame = -1
Query: 621 IFVKTLTGKTITLEVEPSDTIENVKAKI-QDKEGIPP-NQQRLXFAGKQLEDGRTLSDYN 448
+ V T GK V+ + +K +I ++ +G P + Q + F G++L+D R +
Sbjct: 113 VTVITTCGKVFQFHVDRRRNVGYLKKRISKEGKGFPEVDDQEILFKGEKLDDNRIIDGIC 172
Query: 447 IQKESTLHLV 418
S +HL+
Sbjct: 173 KDGNSVIHLL 182
>At1g14650.1 68414.m01741 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein / ubiquitin family protein
similar to SP|Q15459 Splicing factor 3 subunit 1
(Spliceosome associated protein 114) {Homo sapiens};
contains Pfam profiles PF00240: Ubiquitin family,
PF01805: Surp module
Length = 785
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/42 (33%), Positives = 25/42 (59%)
Frame = -1
Query: 570 SDTIENVKAKIQDKEGIPPNQQRLXFAGKQLEDGRTLSDYNI 445
S+ + ++K KI + IP N+Q+L L+D +L+ YN+
Sbjct: 726 SENVGSLKEKIAGEIQIPANKQKLSGKAGFLKDNMSLAHYNV 767
>At3g14130.1 68416.m01787 (S)-2-hydroxy-acid oxidase, peroxisomal,
putative / glycolate oxidase, putative / short chain
alpha-hydroxy acid oxidase, putative similar to Chain A,
Glycolate Oxidase (E.C.1.1.3.15) Mutant With Tyr 24
Replaced By Phe (Y24f) gi|999542
Length = 363
Score = 29.9 bits (64), Expect = 1.5
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Frame = +1
Query: 418 HQVEGGF--LLDIVVRXGTSIFQLLSSKXQPLLIGRDSLFVL 537
H V+G LLD VR GT +F+ L+ Q +LIGR ++ L
Sbjct: 272 HAVKGRIPVLLDGGVRRGTDVFKALALGAQAVLIGRPIVYGL 313
>At1g47680.1 68414.m05297 hypothetical protein
Length = 104
Score = 29.9 bits (64), Expect = 1.5
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -1
Query: 576 EPSDTIENVKAKIQDKEG-IPPNQQRLXFAGKQLEDGRTLSDYNIQKESTLHL 421
E D +E++ K ++ G + +L +G+Q+ R L DY +Q E+T L
Sbjct: 31 EEDDGMEDITKKYHNEVGEVVQGVPQLRRSGRQISQSRYLEDYVMQSETTYGL 83
>At3g14150.1 68416.m01789 (S)-2-hydroxy-acid oxidase, peroxisomal,
putative / glycolate oxidase, putative / short chain
alpha-hydroxy acid oxidase, putative similar to
(S)-2-hydroxy-acid oxidase, peroxisomal (Glycolate
oxidase, GOX) (Short chain alpha-hydroxy acid oxidase)
[Spinacia oleracea] SWISS-PROT:P05414
Length = 363
Score = 29.1 bits (62), Expect = 2.7
Identities = 15/33 (45%), Positives = 21/33 (63%)
Frame = +1
Query: 439 LLDIVVRXGTSIFQLLSSKXQPLLIGRDSLFVL 537
LLD VR GT +F+ L+ Q +LIGR ++ L
Sbjct: 281 LLDGGVRRGTDVFKALALGAQAVLIGRPIIYGL 313
>At4g18360.1 68417.m02723 (S)-2-hydroxy-acid oxidase, peroxisomal,
putative / glycolate oxidase, putative / short chain
alpha-hydroxy acid oxidase, putative similar to
(S)-2-hydroxy-acid oxidase, peroxisomal (Glycolate
oxidase, GOX) (Short chain alpha-hydroxy acid oxidase)
[Spinacia oleracea] SWISS-PROT:P05414
Length = 368
Score = 27.9 bits (59), Expect = 6.2
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 442 LDIVVRXGTSIFQLLSSKXQPLLIGRDSLFVL 537
LD VR GT +F+ L+ + +GR SLF L
Sbjct: 284 LDGGVRRGTDVFKALALGASGVFVGRPSLFSL 315
>At1g22050.1 68414.m02758 ubiquitin family protein contains
INTERPRO:IPR000626 ubiquitin domain
Length = 119
Score = 27.9 bits (59), Expect = 6.2
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 7/46 (15%)
Frame = -1
Query: 570 SDTIENVKAKI-----QDKEGIPP--NQQRLXFAGKQLEDGRTLSD 454
S T+ ++K K+ +DKE P N +L AGK LE+ RTL++
Sbjct: 28 SMTVSSLKEKLISQWPKDKENTPKTVNDMKLINAGKILENNRTLAE 73
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,492,650
Number of Sequences: 28952
Number of extensions: 212500
Number of successful extensions: 725
Number of sequences better than 10.0: 69
Number of HSP's better than 10.0 without gapping: 645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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