Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fprWP01_F_B07
         (652 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholi...    23   1.9  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   1.9  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    23   2.6  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    23   2.6  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    23   3.4  
AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic ac...    21   7.8  

>DQ026039-1|AAY87898.1|  427|Apis mellifera nicotinic acetylcholine
           receptor beta2subunit protein.
          Length = 427

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 10/16 (62%), Positives = 12/16 (75%)
 Frame = +1

Query: 514 LVLLIDSILFIPENIY 561
           LV +I  I+FIP NIY
Sbjct: 407 LVYIIMLIIFIPRNIY 422


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
           AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 274 LVEPFVASEGLAEG 315
           ++EPF   EGL+EG
Sbjct: 612 IIEPFTFQEGLSEG 625


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/26 (38%), Positives = 11/26 (42%)
 Frame = -3

Query: 335 YHKHRSPPSANPSLATKGSTSKLTQP 258
           YH +R P   N   A  G  S L  P
Sbjct: 24  YHPYRQPDGMNQCQAVNGHCSHLCLP 49


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/26 (38%), Positives = 11/26 (42%)
 Frame = -3

Query: 335 YHKHRSPPSANPSLATKGSTSKLTQP 258
           YH +R P   N   A  G  S L  P
Sbjct: 24  YHPYRQPDGMNQCQAVNGHCSHLCLP 49


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +3

Query: 138 FFLPMLIVIALRGYVS 185
           FFLPML+++ + G +S
Sbjct: 207 FFLPMLVMLYVYGRIS 222


>AF514804-1|AAM51823.1|  537|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha-3 protein.
          Length = 537

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = -1

Query: 259 PLSFSPDLLSESSGLSPVNQHV 194
           P   SPD++S   G+  + QH+
Sbjct: 440 PRYLSPDVISALKGVRFIAQHI 461


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,305
Number of Sequences: 438
Number of extensions: 4214
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 19682733
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)