Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_B02
(347 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VH69 Cluster: 40S ribosomal protein S29; n=31; Eukary... 83 1e-15
UniRef50_Q8INN0 Cluster: CG8495-PC, isoform C; n=1; Drosophila m... 79 2e-14
UniRef50_P62273 Cluster: 40S ribosomal protein S29; n=66; Eukary... 77 8e-14
UniRef50_P90983 Cluster: Ribosomal protein, small subunit protei... 70 1e-11
UniRef50_UPI0001554864 Cluster: PREDICTED: similar to ribosomal ... 68 5e-11
UniRef50_UPI0000E202DC Cluster: PREDICTED: similar to ribosomal ... 66 1e-10
UniRef50_A1DNZ6 Cluster: 40S ribosomal protein S29, putative; n=... 61 4e-09
UniRef50_P54110 Cluster: 30S ribosomal protein S14P; n=7; Methan... 61 6e-09
UniRef50_Q680P8 Cluster: 40S ribosomal protein S29; n=4; Eukaryo... 60 8e-09
UniRef50_Q013Q2 Cluster: RS29_CULQU 40S ribosomal protein S29; n... 59 2e-08
UniRef50_O28368 Cluster: 30S ribosomal protein S14P; n=2; cellul... 58 4e-08
UniRef50_Q1DQB3 Cluster: Predicted protein; n=4; Pezizomycotina|... 57 7e-08
UniRef50_Q4Q817 Cluster: Ribosomal protein s29, putative; n=5; T... 56 2e-07
UniRef50_Q97BW2 Cluster: 30S ribosomal protein S14P; n=12; Archa... 54 7e-07
UniRef50_O05635 Cluster: 30S ribosomal protein S14P; n=11; Therm... 53 2e-06
UniRef50_Q6CFB0 Cluster: Similar to sp|P41057 Saccharomyces cere... 52 2e-06
UniRef50_O74329 Cluster: 40S ribosomal protein S29; n=12; cellul... 52 2e-06
UniRef50_Q9HPC0 Cluster: 30S ribosomal protein S14P; n=8; Euryar... 50 1e-05
UniRef50_Q7R0P0 Cluster: GLP_79_44835_45248; n=1; Giardia lambli... 50 1e-05
UniRef50_Q22MB0 Cluster: Putative uncharacterized protein; n=1; ... 50 1e-05
UniRef50_Q74NE6 Cluster: 30S ribosomal protein S14P; n=2; Archae... 49 2e-05
UniRef50_P26816 Cluster: 30S ribosomal protein S14P; n=3; Haloba... 48 4e-05
UniRef50_Q8SS73 Cluster: 40S ribosomal protein S29; n=1; Encepha... 45 3e-04
UniRef50_P62012 Cluster: 30S ribosomal protein S14P; n=10; Archa... 40 0.012
UniRef50_A2ZKX8 Cluster: Putative uncharacterized protein; n=3; ... 39 0.027
UniRef50_Q8XHT6 Cluster: 30S ribosomal protein S14 type Z; n=83;... 36 0.25
UniRef50_Q381G0 Cluster: Putative uncharacterized protein; n=3; ... 35 0.44
UniRef50_A2R3T9 Cluster: Similarity to hypothetical protein YHR0... 34 0.77
UniRef50_Q1EB19 Cluster: Putative uncharacterized protein; n=1; ... 33 1.4
UniRef50_Q7NEG5 Cluster: 30S ribosomal protein S14 type Z; n=3; ... 33 1.4
UniRef50_UPI000023DF20 Cluster: hypothetical protein FG07181.1; ... 32 2.4
UniRef50_Q5B9T7 Cluster: Putative uncharacterized protein; n=1; ... 31 4.1
UniRef50_Q0CJL5 Cluster: Predicted protein; n=3; Trichocomaceae|... 31 4.1
UniRef50_Q9GTH4 Cluster: Nuclear receptor NHR-43; n=3; Caenorhab... 31 5.5
UniRef50_Q9PQP7 Cluster: 30S ribosomal protein S14 type Z; n=145... 31 7.2
UniRef50_Q2U5J9 Cluster: Predicted protein; n=3; Trichocomaceae|... 30 9.5
>UniRef50_Q9VH69 Cluster: 40S ribosomal protein S29; n=31;
Eukaryota|Rep: 40S ribosomal protein S29 - Drosophila
melanogaster (Fruit fly)
Length = 56
Score = 83.0 bits (196), Expect = 1e-15
Identities = 34/36 (94%), Positives = 36/36 (100%)
Frame = +2
Query: 143 CRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 250
CR+CSNRHGLIRKYGLNICRQCFREYA+DIGFKKLD
Sbjct: 21 CRACSNRHGLIRKYGLNICRQCFREYANDIGFKKLD 56
Score = 41.5 bits (93), Expect = 0.004
Identities = 15/19 (78%), Positives = 17/19 (89%)
Frame = +1
Query: 82 MGHANIWYSHPRRYGQGSR 138
MG A +WYSHPR+YGQGSR
Sbjct: 1 MGFATLWYSHPRKYGQGSR 19
>UniRef50_Q8INN0 Cluster: CG8495-PC, isoform C; n=1; Drosophila
melanogaster|Rep: CG8495-PC, isoform C - Drosophila
melanogaster (Fruit fly)
Length = 55
Score = 79.4 bits (187), Expect = 2e-14
Identities = 33/35 (94%), Positives = 35/35 (100%)
Frame = +2
Query: 146 RSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 250
R+CSNRHGLIRKYGLNICRQCFREYA+DIGFKKLD
Sbjct: 21 RACSNRHGLIRKYGLNICRQCFREYANDIGFKKLD 55
>UniRef50_P62273 Cluster: 40S ribosomal protein S29; n=66;
Eukaryota|Rep: 40S ribosomal protein S29 - Homo sapiens
(Human)
Length = 56
Score = 77.0 bits (181), Expect = 8e-14
Identities = 32/37 (86%), Positives = 34/37 (91%)
Frame = +2
Query: 140 SCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 250
SCR CSNRHGLIRKYGLN+CRQCFR+YA DIGF KLD
Sbjct: 20 SCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIKLD 56
Score = 35.9 bits (79), Expect = 0.19
Identities = 12/19 (63%), Positives = 17/19 (89%)
Frame = +1
Query: 82 MGHANIWYSHPRRYGQGSR 138
MGH +++SHPR++GQGSR
Sbjct: 1 MGHQQLYWSHPRKFGQGSR 19
>UniRef50_P90983 Cluster: Ribosomal protein, small subunit protein
29; n=18; Eukaryota|Rep: Ribosomal protein, small
subunit protein 29 - Caenorhabditis elegans
Length = 56
Score = 69.7 bits (163), Expect = 1e-11
Identities = 28/37 (75%), Positives = 32/37 (86%)
Frame = +2
Query: 140 SCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 250
SCR C+ HGLIRKYGL++CR+CFRE A DIGFKKLD
Sbjct: 20 SCRVCAGHHGLIRKYGLDLCRRCFREQARDIGFKKLD 56
Score = 36.3 bits (80), Expect = 0.15
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1
Query: 82 MGHANIWYSHPRRYGQGSR 138
MG N+W+SHPR++G GSR
Sbjct: 1 MGFQNLWFSHPRKFGPGSR 19
>UniRef50_UPI0001554864 Cluster: PREDICTED: similar to ribosomal
protein S29; n=1; Ornithorhynchus anatinus|Rep:
PREDICTED: similar to ribosomal protein S29 -
Ornithorhynchus anatinus
Length = 168
Score = 67.7 bits (158), Expect = 5e-11
Identities = 28/33 (84%), Positives = 30/33 (90%)
Frame = +2
Query: 146 RSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 244
R CSNRHGLIRKYGLN+CRQCFR+YA DIGF K
Sbjct: 85 RVCSNRHGLIRKYGLNMCRQCFRQYAKDIGFIK 117
>UniRef50_UPI0000E202DC Cluster: PREDICTED: similar to ribosomal
protein S29; n=4; Theria|Rep: PREDICTED: similar to
ribosomal protein S29 - Pan troglodytes
Length = 56
Score = 66.5 bits (155), Expect = 1e-10
Identities = 29/37 (78%), Positives = 30/37 (81%)
Frame = +2
Query: 140 SCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 250
SCR SNRHG IRKYGLN CRQCF +YA DIGF KLD
Sbjct: 20 SCRVYSNRHGRIRKYGLNKCRQCFHQYAKDIGFIKLD 56
Score = 34.3 bits (75), Expect = 0.59
Identities = 11/19 (57%), Positives = 17/19 (89%)
Frame = +1
Query: 82 MGHANIWYSHPRRYGQGSR 138
MGH +++SHP+++GQGSR
Sbjct: 1 MGHQQLYWSHPQKFGQGSR 19
>UniRef50_A1DNZ6 Cluster: 40S ribosomal protein S29, putative; n=2;
Fungi/Metazoa group|Rep: 40S ribosomal protein S29,
putative - Neosartorya fischeri (strain ATCC 1020 / DSM
3700 / NRRL 181)(Aspergillus fischerianus (strain ATCC
1020 / DSM 3700 / NRRL 181))
Length = 86
Score = 61.3 bits (142), Expect = 4e-09
Identities = 25/35 (71%), Positives = 30/35 (85%)
Frame = +2
Query: 143 CRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKL 247
CR C++R GLIRKYG++ICRQCFRE A DIGF K+
Sbjct: 21 CRVCAHRAGLIRKYGMDICRQCFREKAQDIGFYKV 55
Score = 36.7 bits (81), Expect = 0.11
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +1
Query: 82 MGHANIWYSHPRRYGQGSRXMPILLQQAWLNPQVRFEHMQTVLQRVCS*HRIQEAGLNGV 261
M H ++WYS PR++G+GSR + +A L +R M + R C + Q+ G V
Sbjct: 1 MTHESVWYSRPRKFGKGSRECRVCAHRAGL---IRKYGMD--ICRQCFREKAQDIGFYKV 55
Query: 262 G 264
G
Sbjct: 56 G 56
>UniRef50_P54110 Cluster: 30S ribosomal protein S14P; n=7;
Methanococcales|Rep: 30S ribosomal protein S14P -
Methanococcus jannaschii
Length = 53
Score = 60.9 bits (141), Expect = 6e-09
Identities = 26/37 (70%), Positives = 30/37 (81%), Gaps = 1/37 (2%)
Frame = +2
Query: 143 CRSCSN-RHGLIRKYGLNICRQCFREYAHDIGFKKLD 250
C+ C + GLIRKYGLN+CRQCFRE AH +GFKKLD
Sbjct: 17 CQRCGHVGPGLIRKYGLNLCRQCFREIAHKLGFKKLD 53
>UniRef50_Q680P8 Cluster: 40S ribosomal protein S29; n=4;
Eukaryota|Rep: 40S ribosomal protein S29 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 56
Score = 60.5 bits (140), Expect = 8e-09
Identities = 25/34 (73%), Positives = 26/34 (76%)
Frame = +2
Query: 143 CRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 244
CR C N HGLIRKYGLN CRQCFR A +IGF K
Sbjct: 21 CRVCGNSHGLIRKYGLNCCRQCFRSNAKEIGFIK 54
Score = 39.5 bits (88), Expect = 0.016
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = +1
Query: 82 MGHANIWYSHPRRYGQGSR 138
MGH+N+W SHP++YG GSR
Sbjct: 1 MGHSNVWNSHPKKYGPGSR 19
>UniRef50_Q013Q2 Cluster: RS29_CULQU 40S ribosomal protein S29; n=1;
Ostreococcus tauri|Rep: RS29_CULQU 40S ribosomal protein
S29 - Ostreococcus tauri
Length = 157
Score = 58.8 bits (136), Expect = 2e-08
Identities = 24/33 (72%), Positives = 27/33 (81%)
Frame = +2
Query: 146 RSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 244
R C N+ +IRKY LNICRQCFREYA DIGF+K
Sbjct: 123 RVCENQWAIIRKYNLNICRQCFREYAKDIGFQK 155
Score = 36.3 bits (80), Expect = 0.15
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = +1
Query: 82 MGHANIWYSHPRRYGQGSR 138
MGH+++W SHP YG+GSR
Sbjct: 23 MGHSDVWASHPANYGKGSR 41
>UniRef50_O28368 Cluster: 30S ribosomal protein S14P; n=2; cellular
organisms|Rep: 30S ribosomal protein S14P -
Archaeoglobus fulgidus
Length = 51
Score = 58.0 bits (134), Expect = 4e-08
Identities = 23/34 (67%), Positives = 26/34 (76%)
Frame = +2
Query: 143 CRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 244
CR C R GLIR YGL +CRQCFRE A ++GFKK
Sbjct: 16 CRRCGRRRGLIRMYGLYLCRQCFREVASELGFKK 49
>UniRef50_Q1DQB3 Cluster: Predicted protein; n=4;
Pezizomycotina|Rep: Predicted protein - Coccidioides
immitis
Length = 123
Score = 57.2 bits (132), Expect = 7e-08
Identities = 23/34 (67%), Positives = 28/34 (82%)
Frame = +2
Query: 143 CRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 244
CR C+++ GLIRKYGL +CRQCFRE + DIGF K
Sbjct: 21 CRVCAHKAGLIRKYGLLVCRQCFREKSQDIGFVK 54
Score = 32.7 bits (71), Expect = 1.8
Identities = 13/30 (43%), Positives = 19/30 (63%)
Frame = +1
Query: 82 MGHANIWYSHPRRYGQGSRXMPILLQQAWL 171
M H +++YS PR YG+GSR + +A L
Sbjct: 1 MTHESVFYSRPRNYGKGSRQCRVCAHKAGL 30
>UniRef50_Q4Q817 Cluster: Ribosomal protein s29, putative; n=5;
Trypanosomatidae|Rep: Ribosomal protein s29, putative -
Leishmania major
Length = 57
Score = 55.6 bits (128), Expect = 2e-07
Identities = 24/35 (68%), Positives = 26/35 (74%)
Frame = +2
Query: 143 CRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKL 247
C CSN+ LIRKY LN+CRQCFRE A IGF KL
Sbjct: 22 CVICSNQKALIRKYELNVCRQCFRENAEHIGFTKL 56
>UniRef50_Q97BW2 Cluster: 30S ribosomal protein S14P; n=12;
Archaea|Rep: 30S ribosomal protein S14P - Thermoplasma
volcanium
Length = 53
Score = 54.0 bits (124), Expect = 7e-07
Identities = 19/37 (51%), Positives = 27/37 (72%)
Frame = +2
Query: 134 LGSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 244
+ C C + G++RKYGL++CRQCFRE A +GF+K
Sbjct: 15 IDGCVRCGRKRGIVRKYGLHLCRQCFRETARQLGFEK 51
>UniRef50_O05635 Cluster: 30S ribosomal protein S14P; n=11;
Thermoprotei|Rep: 30S ribosomal protein S14P -
Sulfolobus acidocaldarius
Length = 54
Score = 52.8 bits (121), Expect = 2e-06
Identities = 20/39 (51%), Positives = 29/39 (74%)
Frame = +2
Query: 128 KDLGSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 244
K + C+ C +R +I+KYGL +CRQCFRE A+ +GF+K
Sbjct: 14 KGVQLCKRCGSRDSVIQKYGLYLCRQCFREVAYPMGFRK 52
>UniRef50_Q6CFB0 Cluster: Similar to sp|P41057 Saccharomyces
cerevisiae YLR388w YS29A ribosomal protein S29; n=1;
Yarrowia lipolytica|Rep: Similar to sp|P41057
Saccharomyces cerevisiae YLR388w YS29A ribosomal protein
S29 - Yarrowia lipolytica (Candida lipolytica)
Length = 78
Score = 52.4 bits (120), Expect = 2e-06
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +2
Query: 143 CRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 244
CR +N++ +IRKYGLN+CRQ FRE A DIGF K
Sbjct: 43 CRITNNQNAVIRKYGLNLCRQSFREKAADIGFTK 76
Score = 38.7 bits (86), Expect = 0.027
Identities = 15/27 (55%), Positives = 17/27 (62%)
Frame = +1
Query: 82 MGHANIWYSHPRRYGQGSRXMPILLQQ 162
M H NIW+SHPR YG+G R I Q
Sbjct: 23 MAHENIWFSHPRHYGKGGRKCRITNNQ 49
>UniRef50_O74329 Cluster: 40S ribosomal protein S29; n=12; cellular
organisms|Rep: 40S ribosomal protein S29 -
Schizosaccharomyces pombe (Fission yeast)
Length = 56
Score = 52.4 bits (120), Expect = 2e-06
Identities = 24/34 (70%), Positives = 25/34 (73%)
Frame = +2
Query: 143 CRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 244
C R GLIRKYGLNI RQ FREYA+DIGF K
Sbjct: 21 CAHTGRRLGLIRKYGLNISRQSFREYANDIGFVK 54
Score = 40.3 bits (90), Expect = 0.009
Identities = 13/19 (68%), Positives = 17/19 (89%)
Frame = +1
Query: 82 MGHANIWYSHPRRYGQGSR 138
M H N+W+SHPR+YG+GSR
Sbjct: 1 MAHENVWFSHPRKYGKGSR 19
>UniRef50_Q9HPC0 Cluster: 30S ribosomal protein S14P; n=8;
Euryarchaeota|Rep: 30S ribosomal protein S14P -
Halobacterium salinarium (Halobacterium halobium)
Length = 52
Score = 50.0 bits (114), Expect = 1e-05
Identities = 19/34 (55%), Positives = 23/34 (67%)
Frame = +2
Query: 143 CRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 244
CR C GL+ KY + +CRQCFRE A +GFKK
Sbjct: 17 CRRCGREQGLVGKYDIWLCRQCFREIARSMGFKK 50
>UniRef50_Q7R0P0 Cluster: GLP_79_44835_45248; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_79_44835_45248 - Giardia lamblia
ATCC 50803
Length = 137
Score = 49.6 bits (113), Expect = 1e-05
Identities = 21/35 (60%), Positives = 25/35 (71%)
Frame = +2
Query: 143 CRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKL 247
CR C N + + RKYGL ICR+CF+E A IGF KL
Sbjct: 102 CRICGNYNSVYRKYGLFICRRCFKENAGKIGFVKL 136
>UniRef50_Q22MB0 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 239
Score = 49.6 bits (113), Expect = 1e-05
Identities = 22/40 (55%), Positives = 25/40 (62%)
Frame = +2
Query: 128 KDLGSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKL 247
KD CR C R GLI KY + CR+CFRE A IGF K+
Sbjct: 15 KDSKECRVCGARQGLITKYEMMTCRRCFREQAPHIGFVKV 54
>UniRef50_Q74NE6 Cluster: 30S ribosomal protein S14P; n=2;
Archaea|Rep: 30S ribosomal protein S14P - Nanoarchaeum
equitans
Length = 69
Score = 49.2 bits (112), Expect = 2e-05
Identities = 17/34 (50%), Positives = 24/34 (70%)
Frame = +2
Query: 143 CRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 244
C C G+IR+YGL +C+ CF+E AH++GF K
Sbjct: 33 CERCGRYDGIIRRYGLYLCKDCFKEVAHELGFFK 66
>UniRef50_P26816 Cluster: 30S ribosomal protein S14P; n=3;
Halobacteriaceae|Rep: 30S ribosomal protein S14P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 61
Score = 48.0 bits (109), Expect = 4e-05
Identities = 18/37 (48%), Positives = 25/37 (67%)
Frame = +2
Query: 134 LGSCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 244
L SC+ C GL+ KY + +CRQCFRE + +GF+K
Sbjct: 23 LESCQRCGREQGLVGKYDIWLCRQCFREISRGMGFRK 59
>UniRef50_Q8SS73 Cluster: 40S ribosomal protein S29; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S29
- Encephalitozoon cuniculi
Length = 55
Score = 45.2 bits (102), Expect = 3e-04
Identities = 22/37 (59%), Positives = 25/37 (67%)
Frame = +2
Query: 140 SCRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 250
SC SC G+IRK L +CR+CFREYA DIGF D
Sbjct: 21 SCVSCYTFRGIIRK--LMMCRRCFREYAGDIGFAIYD 55
>UniRef50_P62012 Cluster: 30S ribosomal protein S14P; n=10;
Archaea|Rep: 30S ribosomal protein S14P - Pyrococcus
abyssi
Length = 56
Score = 39.9 bits (89), Expect = 0.012
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +2
Query: 143 CRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKKLD 250
C C +IR +GL +CR CFRE A +GF+K +
Sbjct: 21 CIRCGQYGPIIRIHGLMLCRHCFREVAPKLGFRKYE 56
>UniRef50_A2ZKX8 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 141
Score = 38.7 bits (86), Expect = 0.027
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = +1
Query: 82 MGHANIWYSHPRRYGQGSR 138
MGH+N+W SHP+ YG GSR
Sbjct: 1 MGHSNVWNSHPKNYGPGSR 19
>UniRef50_Q8XHT6 Cluster: 30S ribosomal protein S14 type Z; n=83;
Bacteria|Rep: 30S ribosomal protein S14 type Z -
Clostridium perfringens
Length = 61
Score = 35.5 bits (78), Expect = 0.25
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +2
Query: 143 CRSCSNRHGLIRKYGLNICRQCFREYAH 226
CR C H +++K+G ICR CFRE A+
Sbjct: 24 CRLCGRPHSVLKKFG--ICRICFRELAY 49
>UniRef50_Q381G0 Cluster: Putative uncharacterized protein; n=3;
Trypanosoma|Rep: Putative uncharacterized protein -
Trypanosoma brucei
Length = 4128
Score = 34.7 bits (76), Expect = 0.44
Identities = 15/48 (31%), Positives = 20/48 (41%)
Frame = -3
Query: 204 CLHMFKPYLRIKPCLLEQDRHXPRSLSVSARVRIPNICVAHFKKLNCC 61
C H P+ + LL + P L V V IP +C + K CC
Sbjct: 2536 CAHSHHPFTEMGSNLLVSNNTPPSKLDVGMSVAIPAVCAFYLKSEGCC 2583
>UniRef50_A2R3T9 Cluster: Similarity to hypothetical protein YHR040w
-Saccharomyces cerevisiae; n=1; Aspergillus niger|Rep:
Similarity to hypothetical protein YHR040w
-Saccharomyces cerevisiae - Aspergillus niger
Length = 396
Score = 33.9 bits (74), Expect = 0.77
Identities = 22/55 (40%), Positives = 25/55 (45%), Gaps = 6/55 (10%)
Frame = -1
Query: 260 TPFSPAS*I--LCHEHTL*STVCICSNRTCGLS----HACWSRIGMXRDPCPYLR 114
TP SP S + +CH CS RTC L H WS+ RDP YLR
Sbjct: 5 TPDSPLSDLCSICHLQPPKYRCPRCSTRTCSLPCTRRHKLWSQCSGVRDPAAYLR 59
>UniRef50_Q1EB19 Cluster: Putative uncharacterized protein; n=1;
Coccidioides immitis|Rep: Putative uncharacterized
protein - Coccidioides immitis
Length = 393
Score = 33.1 bits (72), Expect = 1.4
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 4/44 (9%)
Frame = -1
Query: 233 LCHEHTL*STVCICSNRTCGLS----HACWSRIGMXRDPCPYLR 114
+CH + T CS RTC L H WS+ RDP YL+
Sbjct: 12 ICHTNLPKYTCPRCSTRTCSLPCSKRHKLWSQCSGVRDPAAYLK 55
>UniRef50_Q7NEG5 Cluster: 30S ribosomal protein S14 type Z; n=3;
Bacteria|Rep: 30S ribosomal protein S14 type Z -
Gloeobacter violaceus
Length = 68
Score = 33.1 bits (72), Expect = 1.4
Identities = 15/28 (53%), Positives = 16/28 (57%)
Frame = +2
Query: 143 CRSCSNRHGLIRKYGLNICRQCFREYAH 226
C C G IR +GL CR CFRE AH
Sbjct: 31 CWRCGRPRGYIRDFGL--CRICFREMAH 56
>UniRef50_UPI000023DF20 Cluster: hypothetical protein FG07181.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG07181.1 - Gibberella zeae PH-1
Length = 59
Score = 32.3 bits (70), Expect = 2.4
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +1
Query: 82 MGHANIWYSHPRRYGQGSR 138
M H ++W S PR YG+GSR
Sbjct: 1 MSHESVWNSRPRNYGKGSR 19
>UniRef50_Q5B9T7 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 466
Score = 31.5 bits (68), Expect = 4.1
Identities = 15/31 (48%), Positives = 16/31 (51%), Gaps = 4/31 (12%)
Frame = -1
Query: 194 CSNRTCGLS----HACWSRIGMXRDPCPYLR 114
CS RTC L H WS+ RDP YLR
Sbjct: 27 CSTRTCSLPCTRRHKLWSQCSGVRDPAAYLR 57
>UniRef50_Q0CJL5 Cluster: Predicted protein; n=3;
Trichocomaceae|Rep: Predicted protein - Aspergillus
terreus (strain NIH 2624)
Length = 636
Score = 31.5 bits (68), Expect = 4.1
Identities = 15/31 (48%), Positives = 16/31 (51%), Gaps = 4/31 (12%)
Frame = -1
Query: 194 CSNRTCGLS----HACWSRIGMXRDPCPYLR 114
CS RTC L H WS+ RDP YLR
Sbjct: 274 CSTRTCSLPCSRRHKLWSQCSGIRDPAAYLR 304
>UniRef50_Q9GTH4 Cluster: Nuclear receptor NHR-43; n=3;
Caenorhabditis|Rep: Nuclear receptor NHR-43 -
Caenorhabditis elegans
Length = 459
Score = 31.1 bits (67), Expect = 5.5
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = +2
Query: 143 CRSCSNRHGLIRKYGLNICRQCFREYAHDIGFKK 244
CR C R+ + +G++ICR C + + KK
Sbjct: 57 CRVCERRYDGSQHFGIDICRACAAFFRRSVAVKK 90
>UniRef50_Q9PQP7 Cluster: 30S ribosomal protein S14 type Z; n=145;
Bacteria|Rep: 30S ribosomal protein S14 type Z -
Ureaplasma parvum (Ureaplasma urealyticum biotype 1)
Length = 61
Score = 30.7 bits (66), Expect = 7.2
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +2
Query: 143 CRSCSNRHGLIRKYGLNICRQCFREYAH 226
C C H + RK+G +CR CFR+ A+
Sbjct: 24 CVRCGRPHAVNRKFG--VCRLCFRDLAY 49
>UniRef50_Q2U5J9 Cluster: Predicted protein; n=3;
Trichocomaceae|Rep: Predicted protein - Aspergillus
oryzae
Length = 413
Score = 30.3 bits (65), Expect = 9.5
Identities = 14/31 (45%), Positives = 16/31 (51%), Gaps = 4/31 (12%)
Frame = -1
Query: 194 CSNRTCGLS----HACWSRIGMXRDPCPYLR 114
CS RTC L H WS+ RDP YL+
Sbjct: 27 CSTRTCSLPCSRRHKLWSQCSGVRDPAAYLK 57
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 260,084,485
Number of Sequences: 1657284
Number of extensions: 4536406
Number of successful extensions: 9723
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 9486
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9718
length of database: 575,637,011
effective HSP length: 89
effective length of database: 428,138,735
effective search space used: 11131607110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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