Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_A24
(653 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g65360.1 68418.m08221 histone H3 identical to histone H3 from... 103 1e-22
At5g10400.1 68418.m01206 histone H3 identical to several histone... 103 1e-22
At5g10390.1 68418.m01205 histone H3 identical to histone H3 from... 103 1e-22
At3g27360.1 68416.m03421 histone H3 identical to histone H3 from... 103 1e-22
At1g09200.1 68414.m01027 histone H3 identical to histone H3 from... 103 1e-22
At5g65350.1 68418.m08220 histone H3 nearly identical to histone ... 101 4e-22
At5g10980.1 68418.m01277 histone H3 identical to HISTONE H3.2, M... 100 7e-22
At4g40040.1 68417.m05668 histone H3.2 identical to Histone H3.2,... 100 7e-22
At4g40030.1 68417.m05667 histone H3.2 identical to Histone H3.2,... 100 7e-22
At1g75600.1 68414.m08784 histone H3.2, putative strong similarit... 100 2e-21
At1g13370.1 68414.m01554 histone H3, putative strong similarity ... 98 5e-21
At1g19890.1 68414.m02494 histone H3, putative similar to histone... 97 7e-21
At5g12910.1 68418.m01481 histone H3, putative similar to histone... 87 7e-18
At1g01370.1 68414.m00052 centromeric histone H3 HTR12 (HTR12) si... 50 2e-06
At3g10380.1 68416.m01244 exocyst complex component-related ident... 29 2.0
At2g33670.1 68415.m04126 seven transmembrane MLO family protein ... 28 4.7
At2g19940.2 68415.m02331 semialdehyde dehydrogenase family prote... 28 4.7
At2g19940.1 68415.m02330 semialdehyde dehydrogenase family prote... 28 4.7
At2g44210.1 68415.m05502 expressed protein Pfam profile PF03080... 28 6.2
>At5g65360.1 68418.m08221 histone H3 identical to histone H3 from
Zea mays SP|P05203, Medicago sativa GI:166384,
Encephalartos altensteinii SP|P08903, Pisum sativum
SP|P02300; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 136
Score = 103 bits (247), Expect = 1e-22
Identities = 51/59 (86%), Positives = 55/59 (93%)
Frame = +1
Query: 259 TVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLXFQSAAIGALQEASEAYLXWL 435
TVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDL FQS+A+ ALQEA+EAYL L
Sbjct: 46 TVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGL 104
Score = 94.3 bits (224), Expect = 6e-20
Identities = 43/45 (95%), Positives = 45/45 (100%)
Frame = +3
Query: 123 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPG 257
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPG
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPG 45
Score = 73.7 bits (173), Expect = 1e-13
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = +2
Query: 431 GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 532
GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 103 GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
>At5g10400.1 68418.m01206 histone H3 identical to several histone H3
proteins, including Zea mays SP|P05203, Medicago sativa
GI:166384, Encephalartos altensteinii SP|P08903, Pisum
sativum SP|P02300; contains Pfam profile PF00125 Core
histone H2A/H2B/H3/H4
Length = 136
Score = 103 bits (247), Expect = 1e-22
Identities = 51/59 (86%), Positives = 55/59 (93%)
Frame = +1
Query: 259 TVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLXFQSAAIGALQEASEAYLXWL 435
TVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDL FQS+A+ ALQEA+EAYL L
Sbjct: 46 TVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGL 104
Score = 94.3 bits (224), Expect = 6e-20
Identities = 43/45 (95%), Positives = 45/45 (100%)
Frame = +3
Query: 123 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPG 257
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPG
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPG 45
Score = 73.7 bits (173), Expect = 1e-13
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = +2
Query: 431 GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 532
GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 103 GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
>At5g10390.1 68418.m01205 histone H3 identical to histone H3 from
Zea mays SP|P05203, Medicago sativa GI:166384,
Encephalartos altensteinii SP|P08903, Pisum sativum
SP|P02300; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 136
Score = 103 bits (247), Expect = 1e-22
Identities = 51/59 (86%), Positives = 55/59 (93%)
Frame = +1
Query: 259 TVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLXFQSAAIGALQEASEAYLXWL 435
TVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDL FQS+A+ ALQEA+EAYL L
Sbjct: 46 TVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGL 104
Score = 94.3 bits (224), Expect = 6e-20
Identities = 43/45 (95%), Positives = 45/45 (100%)
Frame = +3
Query: 123 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPG 257
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPG
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPG 45
Score = 73.7 bits (173), Expect = 1e-13
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = +2
Query: 431 GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 532
GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 103 GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
>At3g27360.1 68416.m03421 histone H3 identical to histone H3 from
Zea mays SP|P05203, Medicago sativa GI:166384,
Encephalartos altensteinii SP|P08903, Pisum sativum
SP|P02300; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 136
Score = 103 bits (247), Expect = 1e-22
Identities = 51/59 (86%), Positives = 55/59 (93%)
Frame = +1
Query: 259 TVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLXFQSAAIGALQEASEAYLXWL 435
TVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDL FQS+A+ ALQEA+EAYL L
Sbjct: 46 TVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGL 104
Score = 94.3 bits (224), Expect = 6e-20
Identities = 43/45 (95%), Positives = 45/45 (100%)
Frame = +3
Query: 123 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPG 257
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPG
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPG 45
Score = 73.7 bits (173), Expect = 1e-13
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = +2
Query: 431 GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 532
GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 103 GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
>At1g09200.1 68414.m01027 histone H3 identical to histone H3 from
Zea mays SP|P05203, Medicago sativa GI:166384,
Encephalartos altensteinii SP|P08903, Pisum sativum
SP|P02300; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 136
Score = 103 bits (247), Expect = 1e-22
Identities = 51/59 (86%), Positives = 55/59 (93%)
Frame = +1
Query: 259 TVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLXFQSAAIGALQEASEAYLXWL 435
TVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDL FQS+A+ ALQEA+EAYL L
Sbjct: 46 TVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGL 104
Score = 94.3 bits (224), Expect = 6e-20
Identities = 43/45 (95%), Positives = 45/45 (100%)
Frame = +3
Query: 123 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPG 257
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPG
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPG 45
Score = 73.7 bits (173), Expect = 1e-13
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = +2
Query: 431 GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 532
GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 103 GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
>At5g65350.1 68418.m08220 histone H3 nearly identical to histone H3
from Zea mays SP|P05203, Medicago sativa GI:166384,
Encephalartos altensteinii SP|P08903, Pisum sativum
SP|P02300; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 139
Score = 101 bits (242), Expect = 4e-22
Identities = 49/59 (83%), Positives = 55/59 (93%)
Frame = +1
Query: 259 TVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLXFQSAAIGALQEASEAYLXWL 435
TVALR+IR+YQKSTE+LIRKLPFQRLVREIAQDFKTDL FQS+A+ ALQEA+EAYL L
Sbjct: 46 TVALRDIRKYQKSTEILIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGL 104
Score = 87.0 bits (206), Expect = 1e-17
Identities = 40/45 (88%), Positives = 43/45 (95%)
Frame = +3
Query: 123 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPG 257
MARTKQTAR STGGKAPRKQLA KAAR+SAP+TGGVKKPHR+RPG
Sbjct: 1 MARTKQTARISTGGKAPRKQLAPKAARQSAPATGGVKKPHRFRPG 45
Score = 72.1 bits (169), Expect = 3e-13
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = +2
Query: 431 GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 532
GLFEDTNLCAIHAKRVTIMPK+IQLARRIRGERA
Sbjct: 103 GLFEDTNLCAIHAKRVTIMPKEIQLARRIRGERA 136
>At5g10980.1 68418.m01277 histone H3 identical to HISTONE H3.2,
MINOR, Medicago sativa, SWISSPROT:P11105, histone H3
variant H3.3 Lycopersicon esculentum GI:1435157;
contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 100 bits (240), Expect = 7e-22
Identities = 51/59 (86%), Positives = 54/59 (91%)
Frame = +1
Query: 259 TVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLXFQSAAIGALQEASEAYLXWL 435
TVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDL FQS A+ ALQEA+EAYL L
Sbjct: 46 TVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGL 104
Score = 95.9 bits (228), Expect = 2e-20
Identities = 44/45 (97%), Positives = 45/45 (100%)
Frame = +3
Query: 123 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPG 257
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPG
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPG 45
Score = 73.7 bits (173), Expect = 1e-13
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = +2
Query: 431 GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 532
GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 103 GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
>At4g40040.1 68417.m05668 histone H3.2 identical to Histone H3.2,
minor Lolium temulentum SP|P11105, nearly identical to
histone H3.2 Mus pahari GI:515005; contains Pfam profile
PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 100 bits (240), Expect = 7e-22
Identities = 51/59 (86%), Positives = 54/59 (91%)
Frame = +1
Query: 259 TVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLXFQSAAIGALQEASEAYLXWL 435
TVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDL FQS A+ ALQEA+EAYL L
Sbjct: 46 TVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGL 104
Score = 95.9 bits (228), Expect = 2e-20
Identities = 44/45 (97%), Positives = 45/45 (100%)
Frame = +3
Query: 123 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPG 257
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPG
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPG 45
Score = 73.7 bits (173), Expect = 1e-13
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = +2
Query: 431 GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 532
GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 103 GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
>At4g40030.1 68417.m05667 histone H3.2 identical to Histone H3.2,
minor Lolium temulentum SP|P11105, nearly identical to
histone H3.2 Mus pahari GI:515005; contains Pfam profile
PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 100 bits (240), Expect = 7e-22
Identities = 51/59 (86%), Positives = 54/59 (91%)
Frame = +1
Query: 259 TVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLXFQSAAIGALQEASEAYLXWL 435
TVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDL FQS A+ ALQEA+EAYL L
Sbjct: 46 TVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGL 104
Score = 95.9 bits (228), Expect = 2e-20
Identities = 44/45 (97%), Positives = 45/45 (100%)
Frame = +3
Query: 123 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPG 257
MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHRYRPG
Sbjct: 1 MARTKQTARKSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPG 45
Score = 73.7 bits (173), Expect = 1e-13
Identities = 34/34 (100%), Positives = 34/34 (100%)
Frame = +2
Query: 431 GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 532
GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 103 GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
>At1g75600.1 68414.m08784 histone H3.2, putative strong similarity
to histone H3.2 SP|P11105 GI:417103 from Lolium
temulentum, histone H3.2 from Mus pahari GI:515005;
contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 99.5 bits (237), Expect = 2e-21
Identities = 50/59 (84%), Positives = 54/59 (91%)
Frame = +1
Query: 259 TVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLXFQSAAIGALQEASEAYLXWL 435
TVALREIR+YQKSTELLIRKLPFQRLVREIAQD+KTDL FQS A+ ALQEA+EAYL L
Sbjct: 46 TVALREIRKYQKSTELLIRKLPFQRLVREIAQDYKTDLRFQSHAVLALQEAAEAYLVGL 104
Score = 87.8 bits (208), Expect = 6e-18
Identities = 41/45 (91%), Positives = 42/45 (93%)
Frame = +3
Query: 123 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPG 257
MARTKQTARKS GGKAPR LATKAARKSAP+TGGVKKPHRYRPG
Sbjct: 1 MARTKQTARKSHGGKAPRTLLATKAARKSAPTTGGVKKPHRYRPG 45
Score = 73.3 bits (172), Expect = 1e-13
Identities = 33/34 (97%), Positives = 34/34 (100%)
Frame = +2
Query: 431 GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 532
GLFEDTNLCAIHAKRVTIMPKD+QLARRIRGERA
Sbjct: 103 GLFEDTNLCAIHAKRVTIMPKDVQLARRIRGERA 136
>At1g13370.1 68414.m01554 histone H3, putative strong similarity to
Histone H3.2, minor Medicago sativa SP|P11105, histone
H3 Rubus idaeus GI:10732809; contains Pfam profile
PF00125 Core histone H2A/H2B/H3/H4
Length = 136
Score = 97.9 bits (233), Expect = 5e-21
Identities = 50/59 (84%), Positives = 53/59 (89%)
Frame = +1
Query: 259 TVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLXFQSAAIGALQEASEAYLXWL 435
TVALREIR+YQKSTELL RKLPFQRLVREIAQDFKTDL FQS A+ ALQEA+EAYL L
Sbjct: 46 TVALREIRKYQKSTELLNRKLPFQRLVREIAQDFKTDLRFQSHAVLALQEAAEAYLVGL 104
Score = 87.4 bits (207), Expect = 7e-18
Identities = 40/45 (88%), Positives = 43/45 (95%)
Frame = +3
Query: 123 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPG 257
MARTKQ+ARKS GGKAP KQLATKAARKSAP+TGGVKKPHR+RPG
Sbjct: 1 MARTKQSARKSHGGKAPTKQLATKAARKSAPTTGGVKKPHRFRPG 45
Score = 70.9 bits (166), Expect = 7e-13
Identities = 32/34 (94%), Positives = 33/34 (97%)
Frame = +2
Query: 431 GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 532
GLFEDTNLCAIHAKRVTIMPKD+QLARRIR ERA
Sbjct: 103 GLFEDTNLCAIHAKRVTIMPKDVQLARRIRAERA 136
>At1g19890.1 68414.m02494 histone H3, putative similar to histone H3
from Chlamydomonas reinhardtii GI:571470, Volvox carteri
SP|P08437, histone H3.2 minor from Lolium temulentum
SP|P11105; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 137
Score = 97.5 bits (232), Expect = 7e-21
Identities = 49/59 (83%), Positives = 53/59 (89%)
Frame = +1
Query: 259 TVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLXFQSAAIGALQEASEAYLXWL 435
TVALREIR+YQKST+LLIRKLPFQRLVREIAQDFK DL FQS A+ ALQEA+EAYL L
Sbjct: 47 TVALREIRKYQKSTDLLIRKLPFQRLVREIAQDFKVDLRFQSHAVLALQEAAEAYLVGL 105
Score = 75.8 bits (178), Expect = 2e-14
Identities = 36/46 (78%), Positives = 40/46 (86%), Gaps = 1/46 (2%)
Frame = +3
Query: 123 MARTKQTARKSTGGKAPRKQLATKAARKS-APSTGGVKKPHRYRPG 257
MARTKQTARKSTGGK PRK+LATKAARK+ P GGVK+ HR+RPG
Sbjct: 1 MARTKQTARKSTGGKGPRKELATKAARKTRRPYRGGVKRAHRFRPG 46
Score = 70.5 bits (165), Expect = 9e-13
Identities = 33/34 (97%), Positives = 33/34 (97%)
Frame = +2
Query: 431 GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 532
GLFEDTNLCAIHAKRVTIM KDIQLARRIRGERA
Sbjct: 104 GLFEDTNLCAIHAKRVTIMSKDIQLARRIRGERA 137
>At5g12910.1 68418.m01481 histone H3, putative similar to histone H3
from Mus musculus GI:51301, Gallus gallus GI:211859,
Medicago sativa GI:166384, Pisum sativum SP|P02300;
contains Pfam profile PF00125 Core histone H2A/H2B/H3/H4
Length = 131
Score = 87.4 bits (207), Expect = 7e-18
Identities = 40/56 (71%), Positives = 50/56 (89%)
Frame = +1
Query: 259 TVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLXFQSAAIGALQEASEAYL 426
TVALREIR+YQK+T+L+IRKLPFQRLV+EIAQ K DL FQ+ A+ ALQEA+EA++
Sbjct: 41 TVALREIRKYQKTTDLVIRKLPFQRLVKEIAQSLKADLRFQTGAVSALQEAAEAFM 96
Score = 64.9 bits (151), Expect = 4e-11
Identities = 28/39 (71%), Positives = 33/39 (84%)
Frame = +2
Query: 413 ARLISXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGER 529
A G+FEDTNLCA+HAKR TIMPKDIQLA+R+RG+R
Sbjct: 92 AEAFMVGMFEDTNLCAMHAKRSTIMPKDIQLAKRLRGDR 130
Score = 46.0 bits (104), Expect = 2e-05
Identities = 24/45 (53%), Positives = 31/45 (68%)
Frame = +3
Query: 123 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPG 257
MAR+ QTARK+TGGKAP A + + S P +KKP+RY+PG
Sbjct: 1 MARSNQTARKATGGKAP--HFAMRVWQHSTPP---LKKPYRYKPG 40
>At1g01370.1 68414.m00052 centromeric histone H3 HTR12 (HTR12)
similar to histone H3 GB:X17141 GI:10795 from
Tetrahymena pyriformis, GI:161790 from Tetrahymena
thermophila; contains Pfam profile PF00125 Core histone
H2A/H2B/H3/H4
Length = 178
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/32 (65%), Positives = 27/32 (84%)
Frame = +2
Query: 431 GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGE 526
GLF D+ LCAIHA+RVT+M KD +LARR+ G+
Sbjct: 143 GLFSDSMLCAIHARRVTLMRKDFELARRLGGK 174
Score = 42.3 bits (95), Expect = 3e-04
Identities = 28/61 (45%), Positives = 34/61 (55%), Gaps = 2/61 (3%)
Frame = +1
Query: 259 TVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDL--XFQSAAIGALQEASEAYLXW 432
TVAL+EIR +QK T LLI F R VR I + + A+ ALQEA+E YL
Sbjct: 84 TVALKEIRHFQKQTNLLIPAASFIREVRSITHMLAPPQINRWTAEALVALQEAAEDYLVG 143
Query: 433 L 435
L
Sbjct: 144 L 144
>At3g10380.1 68416.m01244 exocyst complex component-related
identical to Probable exocyst complex component Sec8
(Swiss-Prot:Q93YU5) [Arabidopsis thaliana]; weak
similarity to Exocyst complex component Sec8 (rSec8)
(Swiss-Prot:Q62824) [Rattus norvegicus]
Length = 1053
Score = 29.5 bits (63), Expect = 2.0
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3
Query: 291 LITTNFTKGHCXQGDNDVAS*LH 223
L TTN +K C QGD VA+ LH
Sbjct: 378 LETTNLSKSACSQGDRSVAAGLH 400
>At2g33670.1 68415.m04126 seven transmembrane MLO family protein /
MLO-like protein 5 (MLO5) identical to MLO-like protein
5 (AtMlo5) [Arabidopsis thaliana] SWISS-PROT:O22815;
similar to MLO protein SWISS-PROT:P93766,
NCBI_gi:1877221 [Hordeum vulgare][Barley]
Length = 501
Score = 28.3 bits (60), Expect = 4.7
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = -2
Query: 187 ASCLRGALPPVDLRAVCLVRAIVYFFNVFH 98
A C +G +P + L A+ V ++F VFH
Sbjct: 132 AQCKKGYVPLISLNALHQVHIFIFFLAVFH 161
>At2g19940.2 68415.m02331 semialdehyde dehydrogenase family protein
similar to N-acetyl-glutamyl-phosphate reductase
[Campylobacter jejuni] GI:6650362; contains Pfam
profiles PF02774: Semialdehyde dehydrogenase
dimerisation domain, PF01118: Semialdehyde dehydrogenase
NAD binding domain
Length = 359
Score = 28.3 bits (60), Expect = 4.7
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +3
Query: 372 AFPVCRHRSSPGGKRGLSRLACSKTPTCVLFTPNV*PSCR 491
++ V RHR P ++GLS +A SK V FTP++ P R
Sbjct: 216 SYGVTRHRHVPEIEQGLSDVAQSK--VTVSFTPHLMPMIR 253
>At2g19940.1 68415.m02330 semialdehyde dehydrogenase family protein
similar to N-acetyl-glutamyl-phosphate reductase
[Campylobacter jejuni] GI:6650362; contains Pfam
profiles PF02774: Semialdehyde dehydrogenase
dimerisation domain, PF01118: Semialdehyde dehydrogenase
NAD binding domain
Length = 359
Score = 28.3 bits (60), Expect = 4.7
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +3
Query: 372 AFPVCRHRSSPGGKRGLSRLACSKTPTCVLFTPNV*PSCR 491
++ V RHR P ++GLS +A SK V FTP++ P R
Sbjct: 216 SYGVTRHRHVPEIEQGLSDVAQSK--VTVSFTPHLMPMIR 253
>At2g44210.1 68415.m05502 expressed protein Pfam profile PF03080:
Arabidopsis proteins of unknown function
Length = 415
Score = 27.9 bits (59), Expect = 6.2
Identities = 15/46 (32%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -2
Query: 574 YRITSNQNYN*TNLSTFTTDSSSKL-NILRHDGHTFGVNSTQVGVF 440
YR +S +NY N + SS+ N+L +GH + + GVF
Sbjct: 133 YRASSVENYGMKNQKSIPKPKSSEPPNVLTQNGHQHAIMYVEDGVF 178
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,520,252
Number of Sequences: 28952
Number of extensions: 203172
Number of successful extensions: 537
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 535
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1363910256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -