Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_A17
(656 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8 pr... 311 1e-84
BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8 pr... 311 1e-84
BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8 pr... 311 1e-84
Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8 prot... 311 2e-84
CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein. 311 2e-84
BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8 pr... 311 2e-84
BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8 pr... 311 2e-84
AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8 pr... 311 2e-84
BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein. 284 2e-76
AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8 pr... 184 2e-46
AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein. 42 0.001
BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal... 42 0.003
BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal... 42 0.003
AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA seq... 39 0.014
AK124779-1|BAC85944.1| 163|Homo sapiens protein ( Homo sapiens ... 30 6.3
>BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 311 bits (764), Expect = 1e-84
Identities = 144/184 (78%), Positives = 160/184 (86%)
Frame = +3
Query: 105 RRGKALLNFAL*XYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPE 284
R+G A L +AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA E
Sbjct: 23 RKGAARLRAV--DFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAE 80
Query: 285 GLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHN 464
G++TGQFVYCGKKA L VGNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HN
Sbjct: 81 GIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHN 140
Query: 465 PDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVR 644
P+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VR
Sbjct: 141 PETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVR 200
Query: 645 GVAM 656
GVAM
Sbjct: 201 GVAM 204
Score = 39.1 bits (87), Expect = 0.014
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +2
Query: 65 QRKGAGSVFVSHTKKRKGAPKLRSL 139
QRKGAGSVF +H K RKGA +LR++
Sbjct: 8 QRKGAGSVFRAHVKHRKGAARLRAV 32
>BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 311 bits (764), Expect = 1e-84
Identities = 144/184 (78%), Positives = 160/184 (86%)
Frame = +3
Query: 105 RRGKALLNFAL*XYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPE 284
R+G A L +AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA E
Sbjct: 23 RKGAARLRAV--DFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAE 80
Query: 285 GLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHN 464
G++TGQFVYCGKKA L VGNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HN
Sbjct: 81 GIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHN 140
Query: 465 PDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVR 644
P+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VR
Sbjct: 141 PETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVR 200
Query: 645 GVAM 656
GVAM
Sbjct: 201 GVAM 204
Score = 39.1 bits (87), Expect = 0.014
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +2
Query: 65 QRKGAGSVFVSHTKKRKGAPKLRSL 139
QRKGAGSVF +H K RKGA +LR++
Sbjct: 8 QRKGAGSVFRAHVKHRKGAARLRAV 32
>BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 311 bits (764), Expect = 1e-84
Identities = 144/184 (78%), Positives = 160/184 (86%)
Frame = +3
Query: 105 RRGKALLNFAL*XYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPE 284
R+G A L +AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA E
Sbjct: 23 RKGAARLRAV--DFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAE 80
Query: 285 GLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHN 464
G++TGQFVYCGKKA L VGNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HN
Sbjct: 81 GIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHN 140
Query: 465 PDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVR 644
P+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VR
Sbjct: 141 PETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVR 200
Query: 645 GVAM 656
GVAM
Sbjct: 201 GVAM 204
Score = 39.1 bits (87), Expect = 0.014
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +2
Query: 65 QRKGAGSVFVSHTKKRKGAPKLRSL 139
QRKGAGSVF +H K RKGA +LR++
Sbjct: 8 QRKGAGSVFRAHVKHRKGAARLRAV 32
>Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 311 bits (763), Expect = 2e-84
Identities = 143/184 (77%), Positives = 160/184 (86%)
Frame = +3
Query: 105 RRGKALLNFAL*XYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPE 284
R+G A L +AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA E
Sbjct: 23 RKGAARLRAV--DFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAE 80
Query: 285 GLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHN 464
G++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HN
Sbjct: 81 GIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHN 140
Query: 465 PDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVR 644
P+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VR
Sbjct: 141 PETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVR 200
Query: 645 GVAM 656
GVAM
Sbjct: 201 GVAM 204
Score = 39.1 bits (87), Expect = 0.014
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +2
Query: 65 QRKGAGSVFVSHTKKRKGAPKLRSL 139
QRKGAGSVF +H K RKGA +LR++
Sbjct: 8 QRKGAGSVFRAHVKHRKGAARLRAV 32
>CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein.
Length = 257
Score = 311 bits (763), Expect = 2e-84
Identities = 143/184 (77%), Positives = 160/184 (86%)
Frame = +3
Query: 105 RRGKALLNFAL*XYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPE 284
R+G A L +AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA E
Sbjct: 23 RKGAARLRAV--DFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAE 80
Query: 285 GLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHN 464
G++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HN
Sbjct: 81 GIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHN 140
Query: 465 PDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVR 644
P+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VR
Sbjct: 141 PETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVR 200
Query: 645 GVAM 656
GVAM
Sbjct: 201 GVAM 204
Score = 39.1 bits (87), Expect = 0.014
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +2
Query: 65 QRKGAGSVFVSHTKKRKGAPKLRSL 139
QRKGAGSVF +H K RKGA +LR++
Sbjct: 8 QRKGAGSVFRAHVKHRKGAARLRAV 32
>BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 311 bits (763), Expect = 2e-84
Identities = 143/184 (77%), Positives = 160/184 (86%)
Frame = +3
Query: 105 RRGKALLNFAL*XYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPE 284
R+G A L +AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA E
Sbjct: 23 RKGAARLRAV--DFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAE 80
Query: 285 GLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHN 464
G++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HN
Sbjct: 81 GIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHN 140
Query: 465 PDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVR 644
P+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VR
Sbjct: 141 PETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVR 200
Query: 645 GVAM 656
GVAM
Sbjct: 201 GVAM 204
Score = 39.1 bits (87), Expect = 0.014
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +2
Query: 65 QRKGAGSVFVSHTKKRKGAPKLRSL 139
QRKGAGSVF +H K RKGA +LR++
Sbjct: 8 QRKGAGSVFRAHVKHRKGAARLRAV 32
>BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 311 bits (763), Expect = 2e-84
Identities = 143/184 (77%), Positives = 160/184 (86%)
Frame = +3
Query: 105 RRGKALLNFAL*XYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPE 284
R+G A L +AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA E
Sbjct: 23 RKGAARLRAV--DFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAE 80
Query: 285 GLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHN 464
G++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HN
Sbjct: 81 GIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHN 140
Query: 465 PDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVR 644
P+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VR
Sbjct: 141 PETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVR 200
Query: 645 GVAM 656
GVAM
Sbjct: 201 GVAM 204
Score = 39.1 bits (87), Expect = 0.014
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +2
Query: 65 QRKGAGSVFVSHTKKRKGAPKLRSL 139
QRKGAGSVF +H K RKGA +LR++
Sbjct: 8 QRKGAGSVFRAHVKHRKGAARLRAV 32
>AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 311 bits (763), Expect = 2e-84
Identities = 143/184 (77%), Positives = 160/184 (86%)
Frame = +3
Query: 105 RRGKALLNFAL*XYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPE 284
R+G A L +AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA E
Sbjct: 23 RKGAARLRAV--DFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAE 80
Query: 285 GLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHN 464
G++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+ATVI HN
Sbjct: 81 GIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYATVISHN 140
Query: 465 PDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVR 644
P+ K+TRVKLPSG+KKV+ S+NR +VG+VAGGGRIDKPILKAGRAYHKYK KRNCWP VR
Sbjct: 141 PETKKTRVKLPSGSKKVISSANRAVVGVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVR 200
Query: 645 GVAM 656
GVAM
Sbjct: 201 GVAM 204
Score = 39.1 bits (87), Expect = 0.014
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +2
Query: 65 QRKGAGSVFVSHTKKRKGAPKLRSL 139
QRKGAGSVF +H K RKGA +LR++
Sbjct: 8 QRKGAGSVFRAHVKHRKGAARLRAV 32
>BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein.
Length = 211
Score = 284 bits (696), Expect = 2e-76
Identities = 128/158 (81%), Positives = 142/158 (89%)
Frame = +3
Query: 183 DIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGA 362
DIIHDPGRGAPLA V FRDPY+FK R ELFIA EG++TGQFVYCGKKA L +GNV+PVG
Sbjct: 1 DIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGT 60
Query: 363 MPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMV 542
MPEGTIVC LEEK GDRG+LARASGN+ATVI HNP+ K+TRVKLPSG+KKV+ S+NR +V
Sbjct: 61 MPEGTIVCCLEEKPGDRGKLARASGNYATVISHNPETKKTRVKLPSGSKKVISSANRAVV 120
Query: 543 GIVAGGGRIDKPILKAGRAYHKYKVKRNCWPYVRGVAM 656
G+VAGGGRIDKPILKAGRAYHKYK KRNCWP VRGVAM
Sbjct: 121 GVVAGGGRIDKPILKAGRAYHKYKAKRNCWPRVRGVAM 158
>AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8
protein.
Length = 130
Score = 184 bits (448), Expect = 2e-46
Identities = 86/114 (75%), Positives = 96/114 (84%)
Frame = +3
Query: 105 RRGKALLNFAL*XYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPE 284
R+G A L +AERHGYIKG+VKDIIHDPGRGAPLA V FRDPY+FK R ELFIA E
Sbjct: 19 RKGAARLRAV--DFAERHGYIKGIVKDIIHDPGRGAPLAKVVFRDPYRFKKRTELFIAAE 76
Query: 285 GLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFA 446
G++TGQFVYCGKKA L +GNV+PVG MPEGTIVC LEEK GDRG+LARASGN+A
Sbjct: 77 GIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIVCCLEEKPGDRGKLARASGNYA 130
Score = 39.1 bits (87), Expect = 0.014
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = +2
Query: 65 QRKGAGSVFVSHTKKRKGAPKLRSL 139
QRKGAGSVF +H K RKGA +LR++
Sbjct: 4 QRKGAGSVFRAHVKHRKGAARLRAV 28
>AF132956-1|AAD27731.1| 353|Homo sapiens CGI-22 protein protein.
Length = 353
Score = 42.3 bits (95), Expect = 0.001
Identities = 40/153 (26%), Positives = 70/153 (45%), Gaps = 5/153 (3%)
Frame = +3
Query: 153 RHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFV----YCGK 320
+ G + V + +DP R A +A+V +RK IA E + G + + G+
Sbjct: 118 KSGPFEEKVIQVRYDPCRSADIALV------AGGSRKRWIIATENMQAGDTILNSNHIGR 171
Query: 321 KATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLP 497
A G+ P+GA+P GT++ N+E + G + RA+G ++ + ++LP
Sbjct: 172 MAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL--RKVNGHSIIQLP 229
Query: 498 SGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGR 596
S + + + VG V+ + I KAGR
Sbjct: 230 SKRQMQVLETCVATVGRVSNVDHNKRVIGKAGR 262
>BC020212-1|AAH20212.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 41.5 bits (93), Expect = 0.003
Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 5/153 (3%)
Frame = +3
Query: 153 RHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFV----YCGK 320
+ G + V + +DP R A +A+V +RK IA E + G + + G+
Sbjct: 118 KSGPFEEKVIQVRYDPCRSADIALV------AGGSRKRWIIATENMQAGDTILNSNHIGR 171
Query: 321 KATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLP 497
A G+ P+GA+P GT++ N+E + G + RA+G ++ ++LP
Sbjct: 172 MAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL--RKVNGTAIIQLP 229
Query: 498 SGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGR 596
S + + + VG V+ + I KAGR
Sbjct: 230 SKRQMQVLETCVATVGRVSNVDHNKRVIGKAGR 262
>BC013685-1|AAH13685.1| 305|Homo sapiens mitochondrial ribosomal
protein L2 protein.
Length = 305
Score = 41.5 bits (93), Expect = 0.003
Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 5/153 (3%)
Frame = +3
Query: 153 RHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEGLYTGQFV----YCGK 320
+ G + V + +DP R A +A+V +RK IA E + G + + G+
Sbjct: 118 KSGPFEEKVIQVRYDPCRSADIALV------AGGSRKRWIIATENMQAGDTILNSNHIGR 171
Query: 321 KATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLP 497
A G+ P+GA+P GT++ N+E + G + RA+G ++ ++LP
Sbjct: 172 MAVAAREGDAHPLGALPVGTLINNVESEPGRGAQYIRAAGTCGVLL--RKVNGTAIIQLP 229
Query: 498 SGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGR 596
S + + + VG V+ + I KAGR
Sbjct: 230 SKRQMQVLETCVATVGRVSNVDHNKRVIGKAGR 262
>AL355385-2|CAI13780.1| 302|Homo sapiens protein ( Human DNA
sequence from clone RP11-387M24 on chromosome 6 Contains
the 5' end of a gene for a novel protein (KIAA0076
KIAA0708), the ).
Length = 302
Score = 39.1 bits (87), Expect = 0.014
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 5/119 (4%)
Frame = +3
Query: 255 TRKELFIAPEGLYTGQFV----YCGKKATL-EVGNVMPVGAMPEGTIVCNLEEKMGDRGR 419
+RK IA E + G + + G+ A G+ P+GA+P GT++ N+E + G +
Sbjct: 143 SRKRWIIATENMQAGDTILNSNHIGRMAVAAREGDAHPLGALPVGTLINNVESEPGRGAQ 202
Query: 420 LARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPILKAGR 596
RA+G ++ ++LPS + + + VG V+ + I KAGR
Sbjct: 203 YIRAAGTCGVLL--RKVNGTAIIQLPSKRQMQVLETCVATVGRVSNVDHNKRVIGKAGR 259
>AK124779-1|BAC85944.1| 163|Homo sapiens protein ( Homo sapiens
cDNA FLJ42789 fis, clone BRAWH3007221. ).
Length = 163
Score = 30.3 bits (65), Expect = 6.3
Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = -2
Query: 625 LRLTLYLWYAL-PAFKIGLSIRPPPATIPTMPL 530
L LT +L+ A P F++ +S+ PPP ++P P+
Sbjct: 87 LFLTHFLYLAASPCFRLSVSLFPPPLSLPRSPI 119
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,241,755
Number of Sequences: 237096
Number of extensions: 2421183
Number of successful extensions: 5380
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 5081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5379
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -