Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_A11
(457 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q969Q0 Cluster: 60S ribosomal protein L36a-like; n=88; ... 82 5e-15
UniRef50_P83881 Cluster: 60S ribosomal protein L36a; n=44; Fungi... 82 5e-15
UniRef50_P48166 Cluster: 60S ribosomal protein L44; n=79; Eukary... 80 2e-14
UniRef50_A7P2V5 Cluster: Chromosome chr1 scaffold_5, whole genom... 71 9e-12
UniRef50_A3BKG6 Cluster: Putative uncharacterized protein; n=1; ... 55 8e-07
UniRef50_Q5KA45 Cluster: Putative uncharacterized protein; n=1; ... 41 0.015
UniRef50_A2DAI6 Cluster: 60S ribosomal protein L44, putative; n=... 38 0.10
UniRef50_Q3LWA2 Cluster: Ribosomal protein L44; n=1; Bigelowiell... 36 0.31
UniRef50_A3BKG7 Cluster: Putative uncharacterized protein; n=1; ... 36 0.31
UniRef50_Q6DCL0 Cluster: Asb15-prov protein; n=4; Tetrapoda|Rep:... 32 5.1
UniRef50_Q00TJ9 Cluster: Chromosome 17 contig 1, DNA sequence; n... 32 5.1
UniRef50_Q17E08 Cluster: Putative uncharacterized protein; n=1; ... 32 5.1
UniRef50_Q9DB68 Cluster: Adult male cerebellum cDNA, RIKEN full-... 32 6.7
UniRef50_Q5CXE3 Cluster: Transcription factor E2F wHTH only; n=3... 32 6.7
>UniRef50_Q969Q0 Cluster: 60S ribosomal protein L36a-like; n=88;
Eukaryota|Rep: 60S ribosomal protein L36a-like - Homo
sapiens (Human)
Length = 106
Score = 82.2 bits (194), Expect = 5e-15
Identities = 37/59 (62%), Positives = 44/59 (74%), Gaps = 2/59 (3%)
Frame = +2
Query: 254 YGGQSKPIFXXXXXXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 424
YGGQ+KPIF IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 48 YGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 33.1 bits (72), Expect = 2.9
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +3
Query: 111 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQG 221
MVNVPK RRT+ +QYKK K+ AQG
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQG 37
>UniRef50_P83881 Cluster: 60S ribosomal protein L36a; n=44;
Fungi/Metazoa group|Rep: 60S ribosomal protein L36a -
Homo sapiens (Human)
Length = 106
Score = 82.2 bits (194), Expect = 5e-15
Identities = 37/59 (62%), Positives = 44/59 (74%), Gaps = 2/59 (3%)
Frame = +2
Query: 254 YGGQSKPIFXXXXXXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 424
YGGQ+KPIF IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 48 YGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 33.1 bits (72), Expect = 2.9
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +3
Query: 111 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQG 221
MVNVPK RRT+ +QYKK K+ AQG
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQG 37
>UniRef50_P48166 Cluster: 60S ribosomal protein L44; n=79;
Eukaryota|Rep: 60S ribosomal protein L44 -
Caenorhabditis elegans
Length = 105
Score = 80.2 bits (189), Expect = 2e-14
Identities = 33/57 (57%), Positives = 42/57 (73%)
Frame = +2
Query: 254 YGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDKKRKGQMIQF 424
+GGQ+KPIF IVLR+EC +CK + Q+ +KRCKHFELGG KK +GQ+IQF
Sbjct: 49 FGGQTKPIFRKKAKTTKKIVLRMECTECKHKKQLPIKRCKHFELGGQKKSRGQVIQF 105
Score = 31.9 bits (69), Expect = 6.7
Identities = 18/38 (47%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +3
Query: 111 MVNVPKQRRTY-XXXXXXXXXXXXSQYKKSKERHAAQG 221
MVNVPK RRT+ +QYKK KE AQG
Sbjct: 1 MVNVPKARRTFCDGKCRKHTNHKVTQYKKGKESKFAQG 38
>UniRef50_A7P2V5 Cluster: Chromosome chr1 scaffold_5, whole genome
shotgun sequence; n=9; Eukaryota|Rep: Chromosome chr1
scaffold_5, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 151
Score = 71.3 bits (167), Expect = 9e-12
Identities = 31/52 (59%), Positives = 36/52 (69%)
Frame = +2
Query: 254 YGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 409
YGGQ+KP+F IVLRL+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 96 YGGQTKPVFHKKAKTTKKIVLRLQCQGCKHVSQHPIKRCKHFEIGGDKKGKG 147
>UniRef50_A3BKG6 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 89
Score = 54.8 bits (126), Expect = 8e-07
Identities = 23/34 (67%), Positives = 27/34 (79%)
Frame = +2
Query: 308 IVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 409
IVL+L+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 52 IVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 85
>UniRef50_Q5KA45 Cluster: Putative uncharacterized protein; n=1;
Filobasidiella neoformans|Rep: Putative uncharacterized
protein - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 147
Score = 40.7 bits (91), Expect = 0.015
Identities = 26/48 (54%), Positives = 29/48 (60%)
Frame = +3
Query: 255 TVVSPNPSSKRRQKPLRKLCSVLSVQIAR*DHRLH*RDASTLSSVVTR 398
TVV P+ SS RR +P R+L SV S AR DAST SSVVTR
Sbjct: 55 TVVRPSLSSTRRLRPPRRLSSVSSALSARPSTNSPSSDASTSSSVVTR 102
>UniRef50_A2DAI6 Cluster: 60S ribosomal protein L44, putative; n=1;
Trichomonas vaginalis G3|Rep: 60S ribosomal protein L44,
putative - Trichomonas vaginalis G3
Length = 104
Score = 37.9 bits (84), Expect = 0.10
Identities = 18/53 (33%), Positives = 25/53 (47%)
Frame = +2
Query: 248 RXYGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDKKRK 406
+ +GG+ KPI I LR C CK + L R + FE +KK+K
Sbjct: 46 KGFGGRVKPILRRSKKTSKKISLRFTCQSCKKATMYCLGRLRKFEWTVEKKKK 98
>UniRef50_Q3LWA2 Cluster: Ribosomal protein L44; n=1; Bigelowiella
natans|Rep: Ribosomal protein L44 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 99
Score = 36.3 bits (80), Expect = 0.31
Identities = 16/44 (36%), Positives = 23/44 (52%)
Frame = +2
Query: 254 YGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFEL 385
YGGQ+KP+F ++L C CK +LKR K F++
Sbjct: 48 YGGQTKPVFRKQVKNTKKPSIKLSCEICKKEFIKSLKRTKRFQI 91
>UniRef50_A3BKG7 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 76
Score = 36.3 bits (80), Expect = 0.31
Identities = 13/18 (72%), Positives = 17/18 (94%)
Frame = +2
Query: 356 ALKRCKHFELGGDKKRKG 409
+++RCKHFE+GGDKK KG
Sbjct: 55 SVQRCKHFEIGGDKKGKG 72
>UniRef50_Q6DCL0 Cluster: Asb15-prov protein; n=4; Tetrapoda|Rep:
Asb15-prov protein - Xenopus laevis (African clawed
frog)
Length = 586
Score = 32.3 bits (70), Expect = 5.1
Identities = 16/55 (29%), Positives = 26/55 (47%)
Frame = -1
Query: 295 FCLLFEDGFGLTTVXPAVYDHNVFXPWAACLSLDFLYCDTLCTLWHLHFLQYVLR 131
F + D FG T PA+ + + W +C+ D +CD + W H + V+R
Sbjct: 443 FDCMHGDMFGGTFTWPAL-EEDALPGWTSCVIKDIPFCDFVTVSWMRHLVGKVVR 496
>UniRef50_Q00TJ9 Cluster: Chromosome 17 contig 1, DNA sequence; n=1;
Ostreococcus tauri|Rep: Chromosome 17 contig 1, DNA
sequence - Ostreococcus tauri
Length = 66
Score = 32.3 bits (70), Expect = 5.1
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = -1
Query: 205 LSLDFLYCDTLCTLWHLHFLQYVLRCFGTF 116
L+L LYC TLC LH LQ V FGT+
Sbjct: 5 LALPVLYCVTLCAECFLHPLQNVFLDFGTY 34
>UniRef50_Q17E08 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 594
Score = 32.3 bits (70), Expect = 5.1
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -2
Query: 192 FCTVIPCVLCGIYIFCSTSC 133
F T+IPC C + +FCST C
Sbjct: 244 FLTLIPCKCCTVTMFCSTKC 263
>UniRef50_Q9DB68 Cluster: Adult male cerebellum cDNA, RIKEN
full-length enriched library, clone:1500005N04
product:SIMILAR TO MAMMALIAN INOSITOL HEXAKISPHOSPHATE
KINASE 2 homolog; n=2; Murinae|Rep: Adult male
cerebellum cDNA, RIKEN full-length enriched library,
clone:1500005N04 product:SIMILAR TO MAMMALIAN INOSITOL
HEXAKISPHOSPHATE KINASE 2 homolog - Mus musculus (Mouse)
Length = 262
Score = 31.9 bits (69), Expect = 6.7
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = -2
Query: 420 WIICPFLFL---SPPSSKCLHLFNATCDLTLQSAHSRRS 313
WI+C FL L S PS +CLHL C L SA + S
Sbjct: 215 WIVCCFLLLCLPSLPSPQCLHLRAHPCSLQSGSALKQAS 253
>UniRef50_Q5CXE3 Cluster: Transcription factor E2F wHTH only; n=3;
Cryptosporidium|Rep: Transcription factor E2F wHTH only
- Cryptosporidium parvum Iowa II
Length = 666
Score = 31.9 bits (69), Expect = 6.7
Identities = 21/44 (47%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = -2
Query: 147 CSTSCA-VLV-RSPFLSSFGTISTNVKKRYFNPAMTLDTLTFFC 22
CS S VLV R LSSFGT+ +VK TLDT+ +FC
Sbjct: 432 CSASVPEVLVERDAVLSSFGTVDMSVKLAPNIDDETLDTIPWFC 475
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 423,307,097
Number of Sequences: 1657284
Number of extensions: 7623815
Number of successful extensions: 19685
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 19235
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19676
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 23931581955
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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