Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_A11
(457 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0648 + 20257442-20257528,20257688-20257867,20258055-202581... 70 1e-12
07_03_0646 + 20250684-20250686,20251522-20251701,20251899-202519... 70 1e-12
07_03_0643 + 20239224-20239310,20239470-20239649,20239837-202399... 70 1e-12
07_03_0641 + 20214245-20214247,20215086-20215265,20215463-202155... 70 1e-12
07_03_0640 + 20207497-20207554,20208457-20208482,20208522-202087... 70 1e-12
07_03_0639 + 20203902-20203988,20204152-20204331,20204529-202046... 70 1e-12
07_03_0226 + 15395380-15395382,15396993-15397172,15397286-153973... 70 1e-12
07_03_0645 + 20244889-20244942,20245331-20245405,20245502-20245561 53 1e-07
06_01_0415 + 2958746-2959110,2960468-2960593,2961314-2961998 30 1.0
01_07_0075 + 40908875-40909069,40909147-40909215,40909363-409094... 28 3.1
02_01_0043 + 300122-300907,301447-301722,302347-302481 28 4.1
10_01_0049 - 668482-669283,669596-670131,670235-670452,670554-67... 27 5.4
08_01_0962 + 9627728-9627853,9627961-9628188,9628447-9628455 27 5.4
03_03_0063 - 14176137-14176769,14178220-14178513,14178966-14179058 27 5.4
12_01_0638 - 5376164-5376247,5376734-5380517,5382029-5382045 27 7.2
03_05_0671 + 26608953-26609671,26609775-26610495 27 9.5
>07_03_0648 +
20257442-20257528,20257688-20257867,20258055-20258129,
20258230-20258289
Length = 133
Score = 69.7 bits (163), Expect = 1e-12
Identities = 30/52 (57%), Positives = 36/52 (69%)
Frame = +2
Query: 254 YGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 409
YGGQ+KP+F IVL+L+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 78 YGGQTKPVFHKKAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 129
Score = 27.5 bits (58), Expect = 5.4
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +3
Query: 114 VNVPKQRRTY--XXXXXXXXXXXXSQYKKSKERHAAQG 221
VNVPK ++TY +QYKK K+ +AQG
Sbjct: 30 VNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQG 67
Score = 27.5 bits (58), Expect = 5.4
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +1
Query: 148 KNVNATKYTRYHST--KSPRKGTLPRXRRRYDRKQQGLRWSVQTHLQKEGK 294
KN K+T + T K + + +RRYDRKQ G + K+ K
Sbjct: 41 KNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKKAK 91
>07_03_0646 +
20250684-20250686,20251522-20251701,20251899-20251973,
20252072-20252131
Length = 105
Score = 69.7 bits (163), Expect = 1e-12
Identities = 30/52 (57%), Positives = 36/52 (69%)
Frame = +2
Query: 254 YGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 409
YGGQ+KP+F IVL+L+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 50 YGGQTKPVFHKKAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 101
Score = 29.5 bits (63), Expect = 1.3
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +3
Query: 111 MVNVPKQRRTY--XXXXXXXXXXXXSQYKKSKERHAAQG 221
MVNVPK ++TY +QYKK K+ +AQG
Sbjct: 1 MVNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQG 39
Score = 27.5 bits (58), Expect = 5.4
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +1
Query: 148 KNVNATKYTRYHST--KSPRKGTLPRXRRRYDRKQQGLRWSVQTHLQKEGK 294
KN K+T + T K + + +RRYDRKQ G + K+ K
Sbjct: 13 KNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKKAK 63
>07_03_0643 +
20239224-20239310,20239470-20239649,20239837-20239911,
20240012-20240071
Length = 133
Score = 69.7 bits (163), Expect = 1e-12
Identities = 30/52 (57%), Positives = 36/52 (69%)
Frame = +2
Query: 254 YGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 409
YGGQ+KP+F IVL+L+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 78 YGGQTKPVFHKKAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 129
Score = 27.5 bits (58), Expect = 5.4
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +3
Query: 114 VNVPKQRRTY--XXXXXXXXXXXXSQYKKSKERHAAQG 221
VNVPK ++TY +QYKK K+ +AQG
Sbjct: 30 VNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQG 67
Score = 27.5 bits (58), Expect = 5.4
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +1
Query: 148 KNVNATKYTRYHST--KSPRKGTLPRXRRRYDRKQQGLRWSVQTHLQKEGK 294
KN K+T + T K + + +RRYDRKQ G + K+ K
Sbjct: 41 KNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKKAK 91
>07_03_0641 +
20214245-20214247,20215086-20215265,20215463-20215537,
20215636-20215695
Length = 105
Score = 69.7 bits (163), Expect = 1e-12
Identities = 30/52 (57%), Positives = 36/52 (69%)
Frame = +2
Query: 254 YGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 409
YGGQ+KP+F IVL+L+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 50 YGGQTKPVFHKKAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 101
Score = 29.5 bits (63), Expect = 1.3
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +3
Query: 111 MVNVPKQRRTY--XXXXXXXXXXXXSQYKKSKERHAAQG 221
MVNVPK ++TY +QYKK K+ +AQG
Sbjct: 1 MVNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQG 39
Score = 27.5 bits (58), Expect = 5.4
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +1
Query: 148 KNVNATKYTRYHST--KSPRKGTLPRXRRRYDRKQQGLRWSVQTHLQKEGK 294
KN K+T + T K + + +RRYDRKQ G + K+ K
Sbjct: 13 KNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKKAK 63
>07_03_0640 +
20207497-20207554,20208457-20208482,20208522-20208701,
20208891-20208965,20209062-20209121
Length = 132
Score = 69.7 bits (163), Expect = 1e-12
Identities = 30/52 (57%), Positives = 36/52 (69%)
Frame = +2
Query: 254 YGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 409
YGGQ+KP+F IVL+L+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 77 YGGQTKPVFHKKAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 128
Score = 27.5 bits (58), Expect = 5.4
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +3
Query: 114 VNVPKQRRTY--XXXXXXXXXXXXSQYKKSKERHAAQG 221
VNVPK ++TY +QYKK K+ +AQG
Sbjct: 29 VNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQG 66
Score = 27.5 bits (58), Expect = 5.4
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +1
Query: 148 KNVNATKYTRYHST--KSPRKGTLPRXRRRYDRKQQGLRWSVQTHLQKEGK 294
KN K+T + T K + + +RRYDRKQ G + K+ K
Sbjct: 40 KNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKKAK 90
>07_03_0639 +
20203902-20203988,20204152-20204331,20204529-20204603,
20204696-20204755
Length = 133
Score = 69.7 bits (163), Expect = 1e-12
Identities = 30/52 (57%), Positives = 36/52 (69%)
Frame = +2
Query: 254 YGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 409
YGGQ+KP+F IVL+L+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 78 YGGQTKPVFHKKAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 129
Score = 27.5 bits (58), Expect = 5.4
Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +3
Query: 114 VNVPKQRRTY--XXXXXXXXXXXXSQYKKSKERHAAQG 221
VNVPK ++TY +QYKK K+ +AQG
Sbjct: 30 VNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQG 67
Score = 27.5 bits (58), Expect = 5.4
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +1
Query: 148 KNVNATKYTRYHST--KSPRKGTLPRXRRRYDRKQQGLRWSVQTHLQKEGK 294
KN K+T + T K + + +RRYDRKQ G + K+ K
Sbjct: 41 KNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKKAK 91
>07_03_0226 +
15395380-15395382,15396993-15397172,15397286-15397360,
15397466-15397525
Length = 105
Score = 69.7 bits (163), Expect = 1e-12
Identities = 30/52 (57%), Positives = 36/52 (69%)
Frame = +2
Query: 254 YGGQSKPIFXXXXXXXXXIVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 409
YGGQ+KP+F IVL+L+C CK SQ +KRCKHFE+GGDKK KG
Sbjct: 50 YGGQTKPVFHKKAKTTKKIVLKLQCQSCKHYSQHPIKRCKHFEIGGDKKGKG 101
Score = 29.5 bits (63), Expect = 1.3
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 2/39 (5%)
Frame = +3
Query: 111 MVNVPKQRRTY--XXXXXXXXXXXXSQYKKSKERHAAQG 221
MVNVPK ++TY +QYKK K+ +AQG
Sbjct: 1 MVNVPKTKKTYCKNKECRKHTLHKVTQYKKGKDSLSAQG 39
Score = 27.5 bits (58), Expect = 5.4
Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +1
Query: 148 KNVNATKYTRYHST--KSPRKGTLPRXRRRYDRKQQGLRWSVQTHLQKEGK 294
KN K+T + T K + + +RRYDRKQ G + K+ K
Sbjct: 13 KNKECRKHTLHKVTQYKKGKDSLSAQGKRRYDRKQSGYGGQTKPVFHKKAK 63
>07_03_0645 + 20244889-20244942,20245331-20245405,20245502-20245561
Length = 62
Score = 53.2 bits (122), Expect = 1e-07
Identities = 22/34 (64%), Positives = 27/34 (79%)
Frame = +2
Query: 308 IVLRLECADCKVRSQVALKRCKHFELGGDKKRKG 409
IVL+L+C CK SQ +KRCKHF++GGDKK KG
Sbjct: 25 IVLKLQCQSCKHYSQHPIKRCKHFKIGGDKKGKG 58
>06_01_0415 + 2958746-2959110,2960468-2960593,2961314-2961998
Length = 391
Score = 29.9 bits (64), Expect = 1.0
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 130 SAGRTAKNVNATKYTRYHSTKSPRKGTLPRXRRRY 234
S+GRTA++ + R+H T RKG LPR ++
Sbjct: 99 SSGRTARDAAVAQQERHHDTIKRRKG-LPRWTEKF 132
>01_07_0075 +
40908875-40909069,40909147-40909215,40909363-40909461,
40909999-40910078,40910162-40910444,40910557-40910580,
40911039-40911700,40912037-40912121,40912203-40912254,
40912336-40912385,40912450-40912497,40912590-40912766
Length = 607
Score = 28.3 bits (60), Expect = 3.1
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 6/45 (13%)
Frame = -1
Query: 250 PAVYDHNVFXPWAACLSLDFLYCDTLCT------LWHLHFLQYVL 134
P + D+N F AA LD T+CT LW +FLQY L
Sbjct: 45 PKLNDNNAFRVLAAASFLDLQDLCTICTDFIISELWTSNFLQYQL 89
>02_01_0043 + 300122-300907,301447-301722,302347-302481
Length = 398
Score = 27.9 bits (59), Expect = 4.1
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = -2
Query: 411 CPFLFLSPPSSKCLHLFNATCDLTLQSAH 325
CP F SPPSS C F ++ DL H
Sbjct: 45 CPLGFTSPPSSSCPLGFTSSYDLDAAFHH 73
>10_01_0049 -
668482-669283,669596-670131,670235-670452,670554-670653,
670706-670855
Length = 601
Score = 27.5 bits (58), Expect = 5.4
Identities = 21/85 (24%), Positives = 34/85 (40%), Gaps = 12/85 (14%)
Frame = -2
Query: 234 ITSSXPGQRAFPWTFCTV------------IPCVLCGIYIFCSTSCAVLVRSPFLSSFGT 91
IT+S + PW CTV +P L G+ + +C L F+ G
Sbjct: 343 ITASDEASASRPWKLCTVTQVEELKIFARMLPIFLTGVIFNTAEACFPL----FVEQGGA 398
Query: 90 ISTNVKKRYFNPAMTLDTLTFFCLI 16
+ +V + P +L T T C++
Sbjct: 399 MDNHVAAAFALPPASLTTFTCVCIL 423
>08_01_0962 + 9627728-9627853,9627961-9628188,9628447-9628455
Length = 120
Score = 27.5 bits (58), Expect = 5.4
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Frame = +1
Query: 175 RYHSTKSPR--KGTLPRXRRRYDRKQQGLRWSVQTHLQKE 288
R HS+ SP +GT PR + ++ RW Q L++E
Sbjct: 3 RPHSSSSPCPCQGTAPRCGKNEGGVEESTRWQEQQQLEEE 42
>03_03_0063 - 14176137-14176769,14178220-14178513,14178966-14179058
Length = 339
Score = 27.5 bits (58), Expect = 5.4
Identities = 12/42 (28%), Positives = 18/42 (42%)
Frame = -3
Query: 452 QWSYLLEAFKIGSSVPFSSCHHRAQSACISSMQPVISPCNLH 327
+W + E F+ G+ S H R S+C P P + H
Sbjct: 138 RWEFANEFFRKGAKHLLSEIHRRKSSSCSQPQPPPPFPMHQH 179
>12_01_0638 - 5376164-5376247,5376734-5380517,5382029-5382045
Length = 1294
Score = 27.1 bits (57), Expect = 7.2
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = -1
Query: 235 HNVFXPWAACLSLDFLYCDTLCTLWHLHFLQYVL 134
H+VF + SL+ + C+ L +L L LQY+L
Sbjct: 1062 HDVFKSLKSLKSLEIIGCENLSSLGGLGSLQYLL 1095
>03_05_0671 + 26608953-26609671,26609775-26610495
Length = 479
Score = 26.6 bits (56), Expect = 9.5
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +2
Query: 353 VALKRCKHFELGGDKKRKGQMIQF*MLLINK 445
+A + CKHFE + R G I+ ++ INK
Sbjct: 357 IAAQDCKHFEAASYEDRNGNSIRNVIVPINK 387
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,516,655
Number of Sequences: 37544
Number of extensions: 213651
Number of successful extensions: 594
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 568
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 587
length of database: 14,793,348
effective HSP length: 76
effective length of database: 11,940,004
effective search space used: 895500300
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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