Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_A11
(457 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U78027-3|AAB64204.1| 106|Homo sapiens L44-like ribosomal protei... 82 8e-16
M15661-1|AAA36589.1| 106|Homo sapiens protein ( Human ribosomal... 82 8e-16
CR542198-1|CAG46995.1| 106|Homo sapiens RPL36A protein. 82 8e-16
CR542166-1|CAG46963.1| 106|Homo sapiens RPL36AL protein. 82 8e-16
BC107716-1|AAI07717.1| 106|Homo sapiens ribosomal protein L36a-... 82 8e-16
BC070207-1|AAH70207.1| 106|Homo sapiens ribosomal protein L36a-... 82 8e-16
BC070204-1|AAH70204.1| 106|Homo sapiens ribosomal protein L36a ... 82 8e-16
BC062219-1|AAH62219.1| 106|Homo sapiens ribosomal protein L36a ... 82 8e-16
BC031015-1|AAH31015.1| 106|Homo sapiens ribosomal protein L36a ... 82 8e-16
BC003145-1|AAH03145.1| 106|Homo sapiens ribosomal protein L36a-... 82 8e-16
BC001781-1|AAH01781.1| 106|Homo sapiens ribosomal protein L36a ... 82 8e-16
BC000741-1|AAH00741.1| 106|Homo sapiens ribosomal protein L36a-... 82 8e-16
AY927233-1|AAX08138.1| 106|Homo sapiens cell growth-inhibiting ... 82 8e-16
AY305871-1|AAQ95213.1| 106|Homo sapiens migration-inducing prot... 82 8e-16
AL035422-5|CAI42360.1| 106|Homo sapiens ribosomal protein L36a ... 82 8e-16
AB063609-1|BAC19836.1| 106|Homo sapiens ribosomal protein L36a-... 82 8e-16
BC058160-1|AAH58160.1| 25|Homo sapiens LOC554234 protein protein. 44 2e-04
AJ291390-1|CAC19572.1| 901|Homo sapiens MUC3B mucin protein. 31 1.4
AB038783-1|BAB12117.1| 878|Homo sapiens intestinal mucin protein. 31 1.4
AB038781-1|BAB12115.1| 878|Homo sapiens intestinal mucin protein. 31 1.4
AF113616-1|AAF13032.1| 1217|Homo sapiens intestinal mucin 3 prot... 31 2.5
AF007194-1|AAC02272.1| 957|Homo sapiens mucin protein. 31 2.5
AC006530-6|AAD30184.1| 391|Homo sapiens hypothetical protein pr... 31 2.5
AB038784-1|BAB12118.1| 877|Homo sapiens intestinal mucin protein. 31 2.5
AB038782-1|BAB12116.1| 878|Homo sapiens intestinal mucin protein. 31 2.5
>U78027-3|AAB64204.1| 106|Homo sapiens L44-like ribosomal protein
protein.
Length = 106
Score = 82.2 bits (194), Expect = 8e-16
Identities = 37/59 (62%), Positives = 44/59 (74%), Gaps = 2/59 (3%)
Frame = +2
Query: 254 YGGQSKPIFXXXXXXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 424
YGGQ+KPIF IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 48 YGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 33.1 bits (72), Expect = 0.46
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +3
Query: 111 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQG 221
MVNVPK RRT+ +QYKK K+ AQG
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQG 37
>M15661-1|AAA36589.1| 106|Homo sapiens protein ( Human ribosomal
protein mRNA, complete cds. ).
Length = 106
Score = 82.2 bits (194), Expect = 8e-16
Identities = 37/59 (62%), Positives = 44/59 (74%), Gaps = 2/59 (3%)
Frame = +2
Query: 254 YGGQSKPIFXXXXXXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 424
YGGQ+KPIF IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 48 YGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 33.1 bits (72), Expect = 0.46
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +3
Query: 111 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQG 221
MVNVPK RRT+ +QYKK K+ AQG
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQG 37
>CR542198-1|CAG46995.1| 106|Homo sapiens RPL36A protein.
Length = 106
Score = 82.2 bits (194), Expect = 8e-16
Identities = 37/59 (62%), Positives = 44/59 (74%), Gaps = 2/59 (3%)
Frame = +2
Query: 254 YGGQSKPIFXXXXXXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 424
YGGQ+KPIF IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 48 YGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 33.1 bits (72), Expect = 0.46
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +3
Query: 111 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQG 221
MVNVPK RRT+ +QYKK K+ AQG
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQG 37
>CR542166-1|CAG46963.1| 106|Homo sapiens RPL36AL protein.
Length = 106
Score = 82.2 bits (194), Expect = 8e-16
Identities = 37/59 (62%), Positives = 44/59 (74%), Gaps = 2/59 (3%)
Frame = +2
Query: 254 YGGQSKPIFXXXXXXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 424
YGGQ+KPIF IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 48 YGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 33.1 bits (72), Expect = 0.46
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +3
Query: 111 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQG 221
MVNVPK RRT+ +QYKK K+ AQG
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQG 37
>BC107716-1|AAI07717.1| 106|Homo sapiens ribosomal protein
L36a-like protein.
Length = 106
Score = 82.2 bits (194), Expect = 8e-16
Identities = 37/59 (62%), Positives = 44/59 (74%), Gaps = 2/59 (3%)
Frame = +2
Query: 254 YGGQSKPIFXXXXXXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 424
YGGQ+KPIF IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 48 YGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 33.1 bits (72), Expect = 0.46
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +3
Query: 111 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQG 221
MVNVPK RRT+ +QYKK K+ AQG
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQG 37
>BC070207-1|AAH70207.1| 106|Homo sapiens ribosomal protein
L36a-like protein.
Length = 106
Score = 82.2 bits (194), Expect = 8e-16
Identities = 37/59 (62%), Positives = 44/59 (74%), Gaps = 2/59 (3%)
Frame = +2
Query: 254 YGGQSKPIFXXXXXXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 424
YGGQ+KPIF IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 48 YGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 33.1 bits (72), Expect = 0.46
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +3
Query: 111 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQG 221
MVNVPK RRT+ +QYKK K+ AQG
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQG 37
>BC070204-1|AAH70204.1| 106|Homo sapiens ribosomal protein L36a
protein.
Length = 106
Score = 82.2 bits (194), Expect = 8e-16
Identities = 37/59 (62%), Positives = 44/59 (74%), Gaps = 2/59 (3%)
Frame = +2
Query: 254 YGGQSKPIFXXXXXXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 424
YGGQ+KPIF IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 48 YGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 33.1 bits (72), Expect = 0.46
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +3
Query: 111 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQG 221
MVNVPK RRT+ +QYKK K+ AQG
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQG 37
>BC062219-1|AAH62219.1| 106|Homo sapiens ribosomal protein L36a
protein.
Length = 106
Score = 82.2 bits (194), Expect = 8e-16
Identities = 37/59 (62%), Positives = 44/59 (74%), Gaps = 2/59 (3%)
Frame = +2
Query: 254 YGGQSKPIFXXXXXXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 424
YGGQ+KPIF IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 48 YGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 33.1 bits (72), Expect = 0.46
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +3
Query: 111 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQG 221
MVNVPK RRT+ +QYKK K+ AQG
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQG 37
>BC031015-1|AAH31015.1| 106|Homo sapiens ribosomal protein L36a
protein.
Length = 106
Score = 82.2 bits (194), Expect = 8e-16
Identities = 37/59 (62%), Positives = 44/59 (74%), Gaps = 2/59 (3%)
Frame = +2
Query: 254 YGGQSKPIFXXXXXXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 424
YGGQ+KPIF IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 48 YGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 33.1 bits (72), Expect = 0.46
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +3
Query: 111 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQG 221
MVNVPK RRT+ +QYKK K+ AQG
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQG 37
>BC003145-1|AAH03145.1| 106|Homo sapiens ribosomal protein
L36a-like protein.
Length = 106
Score = 82.2 bits (194), Expect = 8e-16
Identities = 37/59 (62%), Positives = 44/59 (74%), Gaps = 2/59 (3%)
Frame = +2
Query: 254 YGGQSKPIFXXXXXXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 424
YGGQ+KPIF IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 48 YGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 33.1 bits (72), Expect = 0.46
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +3
Query: 111 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQG 221
MVNVPK RRT+ +QYKK K+ AQG
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQG 37
>BC001781-1|AAH01781.1| 106|Homo sapiens ribosomal protein L36a
protein.
Length = 106
Score = 82.2 bits (194), Expect = 8e-16
Identities = 37/59 (62%), Positives = 44/59 (74%), Gaps = 2/59 (3%)
Frame = +2
Query: 254 YGGQSKPIFXXXXXXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 424
YGGQ+KPIF IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 48 YGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 33.1 bits (72), Expect = 0.46
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +3
Query: 111 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQG 221
MVNVPK RRT+ +QYKK K+ AQG
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQG 37
>BC000741-1|AAH00741.1| 106|Homo sapiens ribosomal protein
L36a-like protein.
Length = 106
Score = 82.2 bits (194), Expect = 8e-16
Identities = 37/59 (62%), Positives = 44/59 (74%), Gaps = 2/59 (3%)
Frame = +2
Query: 254 YGGQSKPIFXXXXXXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 424
YGGQ+KPIF IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 48 YGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 33.1 bits (72), Expect = 0.46
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +3
Query: 111 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQG 221
MVNVPK RRT+ +QYKK K+ AQG
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQG 37
>AY927233-1|AAX08138.1| 106|Homo sapiens cell growth-inhibiting
protein 15 protein.
Length = 106
Score = 82.2 bits (194), Expect = 8e-16
Identities = 37/59 (62%), Positives = 44/59 (74%), Gaps = 2/59 (3%)
Frame = +2
Query: 254 YGGQSKPIFXXXXXXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 424
YGGQ+KPIF IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 48 YGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 33.1 bits (72), Expect = 0.46
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +3
Query: 111 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQG 221
MVNVPK RRT+ +QYKK K+ AQG
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQG 37
>AY305871-1|AAQ95213.1| 106|Homo sapiens migration-inducing protein
6 protein.
Length = 106
Score = 82.2 bits (194), Expect = 8e-16
Identities = 37/59 (62%), Positives = 44/59 (74%), Gaps = 2/59 (3%)
Frame = +2
Query: 254 YGGQSKPIFXXXXXXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 424
YGGQ+KPIF IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 48 YGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 33.1 bits (72), Expect = 0.46
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +3
Query: 111 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQG 221
MVNVPK RRT+ +QYKK K+ AQG
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQG 37
>AL035422-5|CAI42360.1| 106|Homo sapiens ribosomal protein L36a
protein.
Length = 106
Score = 82.2 bits (194), Expect = 8e-16
Identities = 37/59 (62%), Positives = 44/59 (74%), Gaps = 2/59 (3%)
Frame = +2
Query: 254 YGGQSKPIFXXXXXXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 424
YGGQ+KPIF IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 48 YGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 33.1 bits (72), Expect = 0.46
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +3
Query: 111 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQG 221
MVNVPK RRT+ +QYKK K+ AQG
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQG 37
>AB063609-1|BAC19836.1| 106|Homo sapiens ribosomal protein
L36a-like protein.
Length = 106
Score = 82.2 bits (194), Expect = 8e-16
Identities = 37/59 (62%), Positives = 44/59 (74%), Gaps = 2/59 (3%)
Frame = +2
Query: 254 YGGQSKPIFXXXXXXXXXIVLRLECAD--CKVRSQVALKRCKHFELGGDKKRKGQMIQF 424
YGGQ+KPIF IVLRLEC + C+ + +A+KRCKHFELGGDKKRKGQ+IQF
Sbjct: 48 YGGQTKPIFRKKAKTTKKIVLRLECVEPNCRSKRMLAIKRCKHFELGGDKKRKGQVIQF 106
Score = 33.1 bits (72), Expect = 0.46
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +3
Query: 111 MVNVPKQRRTYXXXXXXXXXXXXSQYKKSKERHAAQG 221
MVNVPK RRT+ +QYKK K+ AQG
Sbjct: 1 MVNVPKTRRTFCKKCGKHQPHKVTQYKKGKDSLYAQG 37
>BC058160-1|AAH58160.1| 25|Homo sapiens LOC554234 protein protein.
Length = 25
Score = 44.4 bits (100), Expect = 2e-04
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = +2
Query: 353 VALKRCKHFELGGDKKRKGQMIQF 424
+ +KR KHF+LGGDKKRKGQ+IQF
Sbjct: 2 LTIKRYKHFKLGGDKKRKGQVIQF 25
>AJ291390-1|CAC19572.1| 901|Homo sapiens MUC3B mucin protein.
Length = 901
Score = 31.5 bits (68), Expect = 1.4
Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Frame = -2
Query: 240 TIITSSXPGQRAFPWTFCTVIPCVLCGIYIFC--STSCAVLVRSPFLSSFGTISTNVKKR 67
TII SS P + F T I V YIF + A + P LSS T ST+
Sbjct: 265 TIIMSSSPSSASITPVFATTIHSVPSSPYIFSTENVGSASITAFPSLSSSSTTSTSPTSS 324
Query: 66 YFNPAMT 46
A+T
Sbjct: 325 SLTTALT 331
>AB038783-1|BAB12117.1| 878|Homo sapiens intestinal mucin protein.
Length = 878
Score = 31.5 bits (68), Expect = 1.4
Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Frame = -2
Query: 240 TIITSSXPGQRAFPWTFCTVIPCVLCGIYIFC--STSCAVLVRSPFLSSFGTISTNVKKR 67
TII SS P + F T I V YIF + A + P LSS T ST+
Sbjct: 242 TIIMSSSPSSASITPVFATTIHSVPSSPYIFSTENVGSASITAFPSLSSSSTTSTSPTSS 301
Query: 66 YFNPAMT 46
A+T
Sbjct: 302 SLTTALT 308
>AB038781-1|BAB12115.1| 878|Homo sapiens intestinal mucin protein.
Length = 878
Score = 31.5 bits (68), Expect = 1.4
Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Frame = -2
Query: 240 TIITSSXPGQRAFPWTFCTVIPCVLCGIYIFC--STSCAVLVRSPFLSSFGTISTNVKKR 67
TII SS P + F T I V YIF + A + P LSS T ST+
Sbjct: 242 TIIMSSSPSSASITPVFATTIHSVPSSPYIFSTENVGSASITAFPSLSSSSTTSTSPTSS 301
Query: 66 YFNPAMT 46
A+T
Sbjct: 302 SLTTALT 308
>AF113616-1|AAF13032.1| 1217|Homo sapiens intestinal mucin 3
protein.
Length = 1217
Score = 30.7 bits (66), Expect = 2.5
Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Frame = -2
Query: 240 TIITSSXPGQRAFPWTFCTVIPCVLCGIYIFC--STSCAVLVRSPFLSSFGTISTNVKKR 67
TII SS P + F T I V YIF + A + P LSS T ST+
Sbjct: 581 TIIMSSSPSSASITPVFSTTIHSVPSSPYIFSTENVGSASITGFPSLSSSATTSTSSTSS 640
Query: 66 YFNPAMT 46
A+T
Sbjct: 641 SLTTALT 647
>AF007194-1|AAC02272.1| 957|Homo sapiens mucin protein.
Length = 957
Score = 30.7 bits (66), Expect = 2.5
Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Frame = -2
Query: 240 TIITSSXPGQRAFPWTFCTVIPCVLCGIYIFC--STSCAVLVRSPFLSSFGTISTNVKKR 67
TII SS P + F T I V YIF + A + P LSS T ST+
Sbjct: 581 TIIMSSSPSSASITPVFSTTIHSVPSSPYIFSTENVGSASITGFPSLSSSATTSTSSTSS 640
Query: 66 YFNPAMT 46
A+T
Sbjct: 641 SLTTALT 647
>AC006530-6|AAD30184.1| 391|Homo sapiens hypothetical protein
protein.
Length = 391
Score = 30.7 bits (66), Expect = 2.5
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +2
Query: 74 LTFVDIVPNELKNGERT--KTAQDVLQKM*MPQSTQGITVQKVQGKARCPG 220
L FV+ NEL+ G T K+ ++LQ Q T +TVQKV C G
Sbjct: 252 LCFVEREANELRRGRSTVTKSIVELLQTTGGIQGTLPLTVQKVLASQACHG 302
>AB038784-1|BAB12118.1| 877|Homo sapiens intestinal mucin protein.
Length = 877
Score = 30.7 bits (66), Expect = 2.5
Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Frame = -2
Query: 240 TIITSSXPGQRAFPWTFCTVIPCVLCGIYIFC--STSCAVLVRSPFLSSFGTISTNVKKR 67
TII SS P + F T I V YIF + A + P LSS T ST+
Sbjct: 241 TIIMSSSPSSASITPVFSTTIHSVPSSPYIFSTENVGSASITGFPSLSSSATTSTSSTSS 300
Query: 66 YFNPAMT 46
A+T
Sbjct: 301 SLTTALT 307
>AB038782-1|BAB12116.1| 878|Homo sapiens intestinal mucin protein.
Length = 878
Score = 30.7 bits (66), Expect = 2.5
Identities = 23/67 (34%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Frame = -2
Query: 240 TIITSSXPGQRAFPWTFCTVIPCVLCGIYIFC--STSCAVLVRSPFLSSFGTISTNVKKR 67
TII SS P + F T I V YIF + A + P LSS T ST+
Sbjct: 241 TIIMSSSPSSASITPVFSTTIHSVPSSPYIFSTENVGSASITGFPSLSSSATTSTSSTSS 300
Query: 66 YFNPAMT 46
A+T
Sbjct: 301 SLTTALT 307
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 63,207,166
Number of Sequences: 237096
Number of extensions: 1241078
Number of successful extensions: 2676
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 2574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2660
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 3815180866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -