Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_A10
(653 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF036706-2|ABD94090.1| 131|Caenorhabditis elegans Ribosomal pro... 175 3e-44
Z29115-2|CAA82363.1| 91|Caenorhabditis elegans Hypothetical pr... 42 3e-04
AF036706-3|ABD94091.1| 204|Caenorhabditis elegans Hypothetical ... 40 0.002
Z81036-2|CAD30433.1| 431|Caenorhabditis elegans Hypothetical pr... 29 3.8
Z81036-1|CAB02742.1| 473|Caenorhabditis elegans Hypothetical pr... 29 3.8
AF291851-1|AAK55968.1| 103|Caenorhabditis elegans G protein sig... 29 3.8
AL132876-23|CAD92403.1| 210|Caenorhabditis elegans Hypothetical... 28 5.0
AF039053-9|AAN84838.1| 131|Caenorhabditis elegans Hypothetical ... 28 5.0
AF039053-8|AAC25878.1| 178|Caenorhabditis elegans Hypothetical ... 28 5.0
U55366-7|AAA97985.2| 323|Caenorhabditis elegans Serpentine rece... 28 6.7
Z83111-2|CAB05533.2| 331|Caenorhabditis elegans Hypothetical pr... 27 8.8
Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical p... 27 8.8
Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical pr... 27 8.8
AL032635-4|CAA21601.1| 140|Caenorhabditis elegans Hypothetical ... 27 8.8
>AF036706-2|ABD94090.1| 131|Caenorhabditis elegans Ribosomal
protein, small subunitprotein 24 protein.
Length = 131
Score = 175 bits (425), Expect = 3e-44
Identities = 81/116 (69%), Positives = 96/116 (82%), Gaps = 1/116 (0%)
Frame = +1
Query: 106 TIRTRKFMTNRLLARKQMVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVVFVFGFKTNFG 285
TIRTRK +TN+LL RKQMV +V+HPG+PTV K +IREK+AK+YK TPD V FGF++ G
Sbjct: 6 TIRTRKVLTNKLLYRKQMVVEVIHPGRPTVPKADIREKIAKLYKTTPDTVIPFGFESKIG 65
Query: 286 GGKSTGFALIYDTLDLAKKFEPKHRLARHGLYEK-KRPTRKQRKERKNRMKKVRGT 450
GGKS GFAL+YDT+D AKKFEPK+RL R GL K ++P RKQRKERKNR KKVRGT
Sbjct: 66 GGKSKGFALVYDTIDFAKKFEPKYRLVRMGLATKVEKPGRKQRKERKNRQKKVRGT 121
>Z29115-2|CAA82363.1| 91|Caenorhabditis elegans Hypothetical
protein T26G10.3 protein.
Length = 91
Score = 42.3 bits (95), Expect = 3e-04
Identities = 16/33 (48%), Positives = 23/33 (69%)
Frame = +1
Query: 157 MVCDVLHPGKPTVSKTEIREKLAKMYKVTPDVV 255
MV +V+ PG+PT K +IREK+A Y + PD +
Sbjct: 1 MVAEVILPGRPTTLKADIREKIANFYNINPDTM 33
>AF036706-3|ABD94091.1| 204|Caenorhabditis elegans Hypothetical
protein T07A9.14 protein.
Length = 204
Score = 39.9 bits (89), Expect = 0.002
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +1
Query: 301 GFALIYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNR 429
GF L+YDT D A K++P+H + H R + +RKE++ R
Sbjct: 54 GFTLVYDTFDFANKYQPEHS-SNHDGASTSRTSISRRKEKRRR 95
>Z81036-2|CAD30433.1| 431|Caenorhabditis elegans Hypothetical
protein C16C2.2b protein.
Length = 431
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/52 (32%), Positives = 21/52 (40%)
Frame = +3
Query: 222 RQNVQGYSRCSVRIRFQDKLRRWQVNWIRFDLRHTRSGQEVRAQAQVSPPRP 377
RQN QGY R+RF K + W D T Q + PP+P
Sbjct: 201 RQNAQGYRCLMDRLRFAIKTKPWLKALKASDTMVTWVDQRAEFDPFLHPPQP 252
>Z81036-1|CAB02742.1| 473|Caenorhabditis elegans Hypothetical
protein C16C2.2a protein.
Length = 473
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/52 (32%), Positives = 21/52 (40%)
Frame = +3
Query: 222 RQNVQGYSRCSVRIRFQDKLRRWQVNWIRFDLRHTRSGQEVRAQAQVSPPRP 377
RQN QGY R+RF K + W D T Q + PP+P
Sbjct: 201 RQNAQGYRCLMDRLRFAIKTKPWLKALKASDTMVTWVDQRAEFDPFLHPPQP 252
>AF291851-1|AAK55968.1| 103|Caenorhabditis elegans G protein
signaling regulator EAT-16 protein.
Length = 103
Score = 28.7 bits (61), Expect = 3.8
Identities = 17/52 (32%), Positives = 21/52 (40%)
Frame = +3
Query: 222 RQNVQGYSRCSVRIRFQDKLRRWQVNWIRFDLRHTRSGQEVRAQAQVSPPRP 377
RQN QGY R+RF K + W D T Q + PP+P
Sbjct: 1 RQNAQGYRCLMDRLRFAIKTKPWLKALKASDTMVTWVDQRAEFDPFLHPPQP 52
>AL132876-23|CAD92403.1| 210|Caenorhabditis elegans Hypothetical
protein Y105E8A.28 protein.
Length = 210
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +3
Query: 321 HTRSGQEVRAQAQVSPPRPVREEEAHAQTA*RT*EQNEEGP 443
H R+ + R + V PP+ E E A A EQN GP
Sbjct: 26 HLRNEELHRFRQAVPPPQQAEEAEEEADVAENVVEQNRLGP 66
>AF039053-9|AAN84838.1| 131|Caenorhabditis elegans Hypothetical
protein C45H4.14b protein.
Length = 131
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +1
Query: 313 IYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKK 438
I LD KK E KHR A+ +K+ ++Q K+ K +KK
Sbjct: 17 ILKKLDEKKKTEEKHR-AKQERQAQKKGAKEQAKKEKAELKK 57
>AF039053-8|AAC25878.1| 178|Caenorhabditis elegans Hypothetical
protein C45H4.14a protein.
Length = 178
Score = 28.3 bits (60), Expect = 5.0
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +1
Query: 313 IYDTLDLAKKFEPKHRLARHGLYEKKRPTRKQRKERKNRMKK 438
I LD KK E KHR A+ +K+ ++Q K+ K +KK
Sbjct: 64 ILKKLDEKKKTEEKHR-AKQERQAQKKGAKEQAKKEKAELKK 104
>U55366-7|AAA97985.2| 323|Caenorhabditis elegans Serpentine
receptor, class x protein74 protein.
Length = 323
Score = 27.9 bits (59), Expect = 6.7
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 3/50 (6%)
Frame = -1
Query: 218 FSRISVLLTV-GFPGCKTSQTICL-RA-NNLLVMNLRVRIVAVPSLILNY 78
FS + V L V GF + ICL RA NN++V+ + I P+L+L+Y
Sbjct: 22 FSSLIVYLYVSGFAEKTSFNVICLVRAVNNIIVLVVNFLIFLFPTLLLSY 71
>Z83111-2|CAB05533.2| 331|Caenorhabditis elegans Hypothetical
protein F57G8.3 protein.
Length = 331
Score = 27.5 bits (58), Expect = 8.8
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 4/63 (6%)
Frame = -3
Query: 510 IHLYLAFTSLLGGRTYFRFLGTADL-LHSV---LTFFTLFARGPLLLVQAVAG*PVLGLE 343
+HL+ A+ + + + T+ L LH V + FFT F P+L++ AG P+ L
Sbjct: 29 VHLFGAYIIIFKTPDKMKSVRTSMLSLHLVGAFVDFFTSFLTAPVLILPVCAGYPLGVLG 88
Query: 342 LLG 334
+LG
Sbjct: 89 MLG 91
>Z46242-15|CAA86337.2| 2507|Caenorhabditis elegans Hypothetical
protein F10F2.1 protein.
Length = 2507
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = -3
Query: 345 ELLGQIECVVDQSESS*LATSEVCLETEYEHYIGSNLVHFGELLTD 208
+LL IE VVD+ + + S+ C +E + ++G N+VH L+D
Sbjct: 1077 DLLSGIERVVDEWKVAECGISDQCNASENQVFVG-NVVHVVSQLSD 1121
>Z35598-8|CAA84657.2| 2507|Caenorhabditis elegans Hypothetical protein
F10F2.1 protein.
Length = 2507
Score = 27.5 bits (58), Expect = 8.8
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = -3
Query: 345 ELLGQIECVVDQSESS*LATSEVCLETEYEHYIGSNLVHFGELLTD 208
+LL IE VVD+ + + S+ C +E + ++G N+VH L+D
Sbjct: 1077 DLLSGIERVVDEWKVAECGISDQCNASENQVFVG-NVVHVVSQLSD 1121
>AL032635-4|CAA21601.1| 140|Caenorhabditis elegans Hypothetical
protein Y51A2A.6 protein.
Length = 140
Score = 27.5 bits (58), Expect = 8.8
Identities = 18/52 (34%), Positives = 23/52 (44%), Gaps = 4/52 (7%)
Frame = +1
Query: 268 FKTNFGGGKSTGFALI----YDTLDLAKKFEPKHRLARHGLYEKKRPTRKQR 411
F N GGGK+ GF+ + + KK H HG + RPTR R
Sbjct: 21 FVKNNGGGKNHGFSSASSSSSSSSEEGKKHGHGHHHHNHGRPSRPRPTRPPR 72
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,908,332
Number of Sequences: 27780
Number of extensions: 316706
Number of successful extensions: 986
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 981
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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