BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_A08
(614 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF388659-3|AAK71993.1| 548|Apis mellifera 1D-myo-inositol-trisp... 24 1.4
AF388659-2|AAK71994.1| 463|Apis mellifera 1D-myo-inositol-trisp... 24 1.4
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 24 1.4
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 23 2.4
D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 23 3.1
AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 23 3.1
AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 23 3.1
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 4.1
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 4.1
DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholi... 21 7.2
Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein RJP... 21 9.6
>AF388659-3|AAK71993.1| 548|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
Length = 548
Score = 23.8 bits (49), Expect = 1.4
Identities = 10/39 (25%), Positives = 22/39 (56%)
Frame = +3
Query: 252 KTVKKDKDADNLLDQYEDYEPAEYQEVLYNEDRPCPRDC 368
+T +KD +D+++ + + Q++L + + PC DC
Sbjct: 309 ETHQKDGSSDSVIKRTVVSSYLQLQDLLGDFEHPCVMDC 347
Score = 21.0 bits (42), Expect = 9.6
Identities = 10/41 (24%), Positives = 21/41 (51%)
Frame = +1
Query: 298 MRITNPRNTKRFCTTRTGPVPETAYALYLRGYRQAKCSFLE 420
+++ + ++K F TTRT A ++ GY A +++
Sbjct: 419 IKLAHGGSSKDFKTTRTREQVTEALRRFVEGYPHAVPKYIQ 459
>AF388659-2|AAK71994.1| 463|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
Length = 463
Score = 23.8 bits (49), Expect = 1.4
Identities = 10/39 (25%), Positives = 22/39 (56%)
Frame = +3
Query: 252 KTVKKDKDADNLLDQYEDYEPAEYQEVLYNEDRPCPRDC 368
+T +KD +D+++ + + Q++L + + PC DC
Sbjct: 224 ETHQKDGSSDSVIKRTVVSSYLQLQDLLGDFEHPCVMDC 262
Score = 21.0 bits (42), Expect = 9.6
Identities = 10/41 (24%), Positives = 21/41 (51%)
Frame = +1
Query: 298 MRITNPRNTKRFCTTRTGPVPETAYALYLRGYRQAKCSFLE 420
+++ + ++K F TTRT A ++ GY A +++
Sbjct: 334 IKLAHGGSSKDFKTTRTREQVTEALRRFVEGYPHAVPKYIQ 374
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 23.8 bits (49), Expect = 1.4
Identities = 10/39 (25%), Positives = 22/39 (56%)
Frame = +3
Query: 252 KTVKKDKDADNLLDQYEDYEPAEYQEVLYNEDRPCPRDC 368
+T +KD +D+++ + + Q++L + + PC DC
Sbjct: 543 ETHQKDGSSDSVIKRTVVSSYLQLQDLLGDFEHPCVMDC 581
Score = 21.0 bits (42), Expect = 9.6
Identities = 10/41 (24%), Positives = 21/41 (51%)
Frame = +1
Query: 298 MRITNPRNTKRFCTTRTGPVPETAYALYLRGYRQAKCSFLE 420
+++ + ++K F TTRT A ++ GY A +++
Sbjct: 653 IKLAHGGSSKDFKTTRTREQVTEALRRFVEGYPHAVPKYIQ 693
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 23.0 bits (47), Expect = 2.4
Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +3
Query: 240 ESINKTVKKDKDA-DNLLDQY-EDYEPAEYQEVLYNEDRPCPRDCICSVSQGIQTSQ 404
E+ T+++ DA +L D+Y E+Y+ E E+ + P +DC+ S + +Q Q
Sbjct: 385 ETNQLTLQETADAFKDLQDKYYEEYKMYELGELASSFVGPKVKDCLISWNPLMQPKQ 441
>D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein.
Length = 432
Score = 22.6 bits (46), Expect = 3.1
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +3
Query: 243 SINKTVKKDKDADNLLDQYEDYEPAEYQE 329
S+N KK D LL Y D+ A+Y +
Sbjct: 89 SLNVISKKVGDGGPLLQPYPDWSFAKYDD 117
>AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 22.6 bits (46), Expect = 3.1
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +3
Query: 243 SINKTVKKDKDADNLLDQYEDYEPAEYQE 329
S+N KK D LL Y D+ A+Y +
Sbjct: 89 SLNVISKKVGDGGPLLQPYPDWSFAKYDD 117
>AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly
protein MRJP1 protein.
Length = 432
Score = 22.6 bits (46), Expect = 3.1
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +3
Query: 243 SINKTVKKDKDADNLLDQYEDYEPAEYQE 329
S+N KK D LL Y D+ A+Y +
Sbjct: 89 SLNVISKKVGDGGPLLQPYPDWSFAKYDD 117
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.2 bits (45), Expect = 4.1
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1
Query: 401 ACLYPLRYRAYAVSGTGPVLVV 336
AC P YR YA +G+ P+LV+
Sbjct: 263 ACPTP-EYRWYAQTGSEPMLVL 283
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.2 bits (45), Expect = 4.1
Identities = 11/22 (50%), Positives = 15/22 (68%)
Frame = -1
Query: 401 ACLYPLRYRAYAVSGTGPVLVV 336
AC P YR YA +G+ P+LV+
Sbjct: 263 ACPTP-EYRWYAQTGSEPMLVL 283
>DQ026037-1|AAY87896.1| 431|Apis mellifera nicotinic acetylcholine
receptor alpha9subunit protein.
Length = 431
Score = 21.4 bits (43), Expect = 7.2
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +1
Query: 211 SWQHARWYSANLSIKPS 261
SW W ++LS KPS
Sbjct: 93 SWMTLMWTDSHLSWKPS 109
>Z26319-1|CAA81228.1| 464|Apis mellifera royal jelly protein
RJP57-2 protein.
Length = 464
Score = 21.0 bits (42), Expect = 9.6
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +3
Query: 243 SINKTVKKDKDADNLLDQYEDYEPAEYQE 329
S+N K + LL Y D+ A+Y++
Sbjct: 94 SLNVVSDKTGNGGRLLQPYPDWSFAKYED 122
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,515
Number of Sequences: 438
Number of extensions: 3854
Number of successful extensions: 21
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18215697
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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