Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fprWP01_F_A04
(587 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 126 9e-30
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 126 9e-30
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 86 2e-17
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 86 2e-17
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 86 2e-17
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 82 2e-16
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 82 2e-16
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 82 2e-16
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 78 5e-15
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 78 5e-15
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 71 5e-13
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 71 5e-13
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 64 5e-11
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 58 5e-09
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 56 2e-08
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 56 2e-08
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 56 2e-08
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 56 2e-08
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 56 2e-08
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 56 2e-08
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 55 4e-08
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 53 1e-07
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 53 1e-07
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 49 2e-06
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 48 4e-06
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 47 1e-05
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 47 1e-05
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 46 3e-05
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 46 3e-05
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 46 3e-05
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 46 3e-05
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 46 3e-05
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 45 5e-05
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 45 5e-05
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 44 6e-05
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 44 1e-04
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 44 1e-04
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 44 1e-04
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 44 1e-04
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 43 1e-04
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 43 1e-04
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 43 1e-04
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 43 1e-04
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 42 2e-04
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 42 3e-04
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 41 6e-04
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 40 0.002
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 40 0.002
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 39 0.003
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 39 0.003
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 38 0.004
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 38 0.004
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 38 0.005
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 38 0.007
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 38 0.007
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 37 0.012
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 37 0.012
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 36 0.016
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 35 0.037
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 35 0.037
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 35 0.037
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 35 0.049
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 35 0.049
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 34 0.065
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 34 0.086
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 34 0.086
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 34 0.086
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 34 0.086
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 34 0.086
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 34 0.086
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 33 0.11
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 33 0.11
U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical pr... 33 0.15
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 33 0.15
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 33 0.15
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 33 0.15
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 33 0.20
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 32 0.26
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 32 0.35
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 31 0.61
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 31 0.61
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 31 0.61
Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical pr... 30 1.4
U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein. 30 1.4
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 29 1.9
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 29 3.2
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 29 3.2
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 29 3.2
Z81064-7|CAB02960.2| 382|Caenorhabditis elegans Hypothetical pr... 28 4.3
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 28 4.3
AL031621-7|CAE46665.1| 382|Caenorhabditis elegans Hypothetical ... 28 4.3
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 28 5.7
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 28 5.7
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 28 5.7
Z81139-8|CAB03483.2| 361|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z81062-15|CAB02950.2| 361|Caenorhabditis elegans Hypothetical p... 27 7.5
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 27 7.5
Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical pr... 27 9.9
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 126 bits (305), Expect = 9e-30
Identities = 62/129 (48%), Positives = 85/129 (65%), Gaps = 5/129 (3%)
Frame = +2
Query: 53 RMNPDMDD-----DEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGF 217
R+N D DD + GK+F+GGLSW+T+ ENL+ YF R+GEV +C+VM++ + R+RGF
Sbjct: 29 RLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGF 88
Query: 218 GFVTFADPSLVNLVLQNGPHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGGLPSNVTE 397
GF+TF DPS V+ VL N H+LDG+ IDPK P+ Q K KVF+GGL + T
Sbjct: 89 GFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPKRTQ-AKLVTKTKKVFIGGLSATSTL 147
Query: 398 TDLRXIFRT 424
D++ F T
Sbjct: 148 EDMKQYFET 156
Score = 67.7 bits (158), Expect = 6e-12
Identities = 29/83 (34%), Positives = 53/83 (63%)
Frame = +2
Query: 89 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 268
K+F+GGLS ++ E++++YF YG+V D ++M + + R RGFGFVTF + + V +
Sbjct: 135 KVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEI 194
Query: 269 GPHQLDGRTIDPKPCNPRTLQKP 337
H+++G+ ++ K P+ + P
Sbjct: 195 HFHEINGKMVECKKAQPKEVMLP 217
Score = 38.3 bits (85), Expect = 0.004
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +3
Query: 414 FFGRYGKVMEVVIMYDQXKKKSXGXGFLSFEDEXS 518
+FGR+G+V E ++M D K++ G GF++F D S
Sbjct: 64 YFGRFGEVNECMVMRDPATKRARGFGFITFVDPSS 98
Score = 33.9 bits (74), Expect = 0.086
Identities = 11/33 (33%), Positives = 23/33 (69%)
Frame = +3
Query: 414 FFGRYGKVMEVVIMYDQXKKKSXGXGFLSFEDE 512
+F YGKV + ++M+D+ ++ G GF++F+ +
Sbjct: 153 YFETYGKVEDAMLMFDKATQRHRGFGFVTFDSD 185
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 126 bits (305), Expect = 9e-30
Identities = 62/129 (48%), Positives = 85/129 (65%), Gaps = 5/129 (3%)
Frame = +2
Query: 53 RMNPDMDD-----DEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGF 217
R+N D DD + GK+F+GGLSW+T+ ENL+ YF R+GEV +C+VM++ + R+RGF
Sbjct: 29 RLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGF 88
Query: 218 GFVTFADPSLVNLVLQNGPHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGGLPSNVTE 397
GF+TF DPS V+ VL N H+LDG+ IDPK P+ Q K KVF+GGL + T
Sbjct: 89 GFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPKRTQ-AKLVTKTKKVFIGGLSATSTL 147
Query: 398 TDLRXIFRT 424
D++ F T
Sbjct: 148 EDMKQYFET 156
Score = 67.7 bits (158), Expect = 6e-12
Identities = 29/83 (34%), Positives = 53/83 (63%)
Frame = +2
Query: 89 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 268
K+F+GGLS ++ E++++YF YG+V D ++M + + R RGFGFVTF + + V +
Sbjct: 135 KVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEI 194
Query: 269 GPHQLDGRTIDPKPCNPRTLQKP 337
H+++G+ ++ K P+ + P
Sbjct: 195 HFHEINGKMVECKKAQPKEVMLP 217
Score = 38.3 bits (85), Expect = 0.004
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +3
Query: 414 FFGRYGKVMEVVIMYDQXKKKSXGXGFLSFEDEXS 518
+FGR+G+V E ++M D K++ G GF++F D S
Sbjct: 64 YFGRFGEVNECMVMRDPATKRARGFGFITFVDPSS 98
Score = 33.9 bits (74), Expect = 0.086
Identities = 11/33 (33%), Positives = 23/33 (69%)
Frame = +3
Query: 414 FFGRYGKVMEVVIMYDQXKKKSXGXGFLSFEDE 512
+F YGKV + ++M+D+ ++ G GF++F+ +
Sbjct: 153 YFETYGKVEDAMLMFDKATQRHRGFGFVTFDSD 185
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 86.2 bits (204), Expect = 2e-17
Identities = 39/118 (33%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Frame = +2
Query: 68 MDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSL 247
++ + K+FVGGL+ T+ + ++ ++S++GE+ D +VM++ + RSRGFGFVTF+ +
Sbjct: 17 LEPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTE 76
Query: 248 VNLVLQNGPHQLDGRTIDPKPCNPR-TLQKPKRGGGYPKVFLGGLPSNVTETDLRXIF 418
V+ ++ PH +DG+T+DPK PR + + ++++ G+ + TE L F
Sbjct: 77 VDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYF 134
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/71 (30%), Positives = 40/71 (56%)
Frame = +2
Query: 89 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 268
+L+V G+ + +++ L YF++YG V ++ + + + RGFGFVTF D V+ +
Sbjct: 115 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 174
Query: 269 GPHQLDGRTID 301
H ++G D
Sbjct: 175 KSHMVNGHRCD 185
Score = 37.5 bits (83), Expect = 0.007
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +3
Query: 309 RAILALFKNRNVA-VDTLRCSLAGCHRTLPKPISGXFFGRYGKVMEVVIMYDQXKKKSXG 485
RA+ KNR+ + V T R ++G + + +F +YG V + I+ D+ +K G
Sbjct: 97 RAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRG 156
Query: 486 XGFLSFEDEXS 518
GF++F+D S
Sbjct: 157 FGFVTFDDHDS 167
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 86.2 bits (204), Expect = 2e-17
Identities = 39/118 (33%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Frame = +2
Query: 68 MDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSL 247
++ + K+FVGGL+ T+ + ++ ++S++GE+ D +VM++ + RSRGFGFVTF+ +
Sbjct: 17 LEPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTE 76
Query: 248 VNLVLQNGPHQLDGRTIDPKPCNPR-TLQKPKRGGGYPKVFLGGLPSNVTETDLRXIF 418
V+ ++ PH +DG+T+DPK PR + + ++++ G+ + TE L F
Sbjct: 77 VDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYF 134
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/71 (30%), Positives = 40/71 (56%)
Frame = +2
Query: 89 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 268
+L+V G+ + +++ L YF++YG V ++ + + + RGFGFVTF D V+ +
Sbjct: 115 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 174
Query: 269 GPHQLDGRTID 301
H ++G D
Sbjct: 175 KSHMVNGHRCD 185
Score = 37.5 bits (83), Expect = 0.007
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +3
Query: 309 RAILALFKNRNVA-VDTLRCSLAGCHRTLPKPISGXFFGRYGKVMEVVIMYDQXKKKSXG 485
RA+ KNR+ + V T R ++G + + +F +YG V + I+ D+ +K G
Sbjct: 97 RAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRG 156
Query: 486 XGFLSFEDEXS 518
GF++F+D S
Sbjct: 157 FGFVTFDDHDS 167
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 86.2 bits (204), Expect = 2e-17
Identities = 39/118 (33%), Positives = 73/118 (61%), Gaps = 1/118 (0%)
Frame = +2
Query: 68 MDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSL 247
++ + K+FVGGL+ T+ + ++ ++S++GE+ D +VM++ + RSRGFGFVTF+ +
Sbjct: 17 LEPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTE 76
Query: 248 VNLVLQNGPHQLDGRTIDPKPCNPR-TLQKPKRGGGYPKVFLGGLPSNVTETDLRXIF 418
V+ ++ PH +DG+T+DPK PR + + ++++ G+ + TE L F
Sbjct: 77 VDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYF 134
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/71 (30%), Positives = 40/71 (56%)
Frame = +2
Query: 89 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 268
+L+V G+ + +++ L YF++YG V ++ + + + RGFGFVTF D V+ +
Sbjct: 115 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 174
Query: 269 GPHQLDGRTID 301
H ++G D
Sbjct: 175 KSHMVNGHRCD 185
Score = 37.5 bits (83), Expect = 0.007
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +3
Query: 309 RAILALFKNRNVA-VDTLRCSLAGCHRTLPKPISGXFFGRYGKVMEVVIMYDQXKKKSXG 485
RA+ KNR+ + V T R ++G + + +F +YG V + I+ D+ +K G
Sbjct: 97 RAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRG 156
Query: 486 XGFLSFEDEXS 518
GF++F+D S
Sbjct: 157 FGFVTFDDHDS 167
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 82.2 bits (194), Expect = 2e-16
Identities = 36/78 (46%), Positives = 52/78 (66%)
Frame = +2
Query: 89 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 268
KLF+GGLS +T+ E L YFS++G V+D +V+++ + SRGFGFVTFA + +
Sbjct: 50 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 109
Query: 269 GPHQLDGRTIDPKPCNPR 322
PH+L G+T+D K PR
Sbjct: 110 RPHKLGGKTVDSKRAIPR 127
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 82.2 bits (194), Expect = 2e-16
Identities = 36/78 (46%), Positives = 52/78 (66%)
Frame = +2
Query: 89 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 268
KLF+GGLS +T+ E L YFS++G V+D +V+++ + SRGFGFVTFA + +
Sbjct: 70 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 129
Query: 269 GPHQLDGRTIDPKPCNPR 322
PH+L G+T+D K PR
Sbjct: 130 RPHKLGGKTVDSKRAIPR 147
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 82.2 bits (194), Expect = 2e-16
Identities = 36/78 (46%), Positives = 52/78 (66%)
Frame = +2
Query: 89 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 268
KLF+GGLS +T+ E L YFS++G V+D +V+++ + SRGFGFVTFA + +
Sbjct: 71 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 130
Query: 269 GPHQLDGRTIDPKPCNPR 322
PH+L G+T+D K PR
Sbjct: 131 RPHKLGGKTVDSKRAIPR 148
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 77.8 bits (183), Expect = 5e-15
Identities = 44/114 (38%), Positives = 63/114 (55%)
Frame = +2
Query: 77 DEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNL 256
+E K+FVGG+S E + E+L +F++YGEV V + +GRSRGF FV F L
Sbjct: 26 NEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKL 85
Query: 257 VLQNGPHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGGLPSNVTETDLRXIF 418
L + G++++ KP R + KVF+GGLPS+ +E DLR F
Sbjct: 86 ALAAREQTIKGKSVEVKPAKSRENK---------KVFVGGLPSDYSEQDLRSHF 130
Score = 42.3 bits (95), Expect = 2e-04
Identities = 24/93 (25%), Positives = 42/93 (45%)
Frame = +2
Query: 80 EKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLV 259
E K+FVGGL + S+++L+ +F ++G+V D + ++ R F F+ F + +
Sbjct: 108 ENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
Query: 260 LQNGPHQLDGRTIDPKPCNPRTLQKPKRGGGYP 358
R D K P+ + P G P
Sbjct: 168 SSQTKQTFGTRECDVKKAVPQGKRFPGAQGRMP 200
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +3
Query: 417 FGRYGKVMEVVIMYDQXKKKSXGXGFLSF 503
F +YG+V + + YD+ +S G F+ F
Sbjct: 49 FTQYGEVAQAQVKYDRTNGRSRGFAFVEF 77
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 77.8 bits (183), Expect = 5e-15
Identities = 44/114 (38%), Positives = 63/114 (55%)
Frame = +2
Query: 77 DEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNL 256
+E K+FVGG+S E + E+L +F++YGEV V + +GRSRGF FV F L
Sbjct: 26 NEDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKL 85
Query: 257 VLQNGPHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGGLPSNVTETDLRXIF 418
L + G++++ KP R + KVF+GGLPS+ +E DLR F
Sbjct: 86 ALAAREQTIKGKSVEVKPAKSRENK---------KVFVGGLPSDYSEQDLRSHF 130
Score = 42.3 bits (95), Expect = 2e-04
Identities = 24/93 (25%), Positives = 42/93 (45%)
Frame = +2
Query: 80 EKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLV 259
E K+FVGGL + S+++L+ +F ++G+V D + ++ R F F+ F + +
Sbjct: 108 ENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
Query: 260 LQNGPHQLDGRTIDPKPCNPRTLQKPKRGGGYP 358
R D K P+ + P G P
Sbjct: 168 SSQTKQTFGTRECDVKKAVPQGKRFPGAQGRMP 200
Score = 27.5 bits (58), Expect = 7.5
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = +3
Query: 417 FGRYGKVMEVVIMYDQXKKKSXGXGFLSF 503
F +YG+V + + YD+ +S G F+ F
Sbjct: 49 FTQYGEVAQAQVKYDRTNGRSRGFAFVEF 77
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 71.3 bits (167), Expect = 5e-13
Identities = 32/96 (33%), Positives = 59/96 (61%), Gaps = 1/96 (1%)
Frame = +2
Query: 134 LQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQNGPHQLDGRTIDPKPC 313
++ ++S++GE+ D +VM++ + RSRGFGFVTF+ + V+ ++ PH +DG+T+DPK
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 314 NPR-TLQKPKRGGGYPKVFLGGLPSNVTETDLRXIF 418
PR + + ++++ G+ + TE L F
Sbjct: 61 VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYF 96
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/71 (30%), Positives = 40/71 (56%)
Frame = +2
Query: 89 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 268
+L+V G+ + +++ L YF++YG V ++ + + + RGFGFVTF D V+ +
Sbjct: 77 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 136
Query: 269 GPHQLDGRTID 301
H ++G D
Sbjct: 137 KSHMVNGHRCD 147
Score = 37.5 bits (83), Expect = 0.007
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +3
Query: 309 RAILALFKNRNVA-VDTLRCSLAGCHRTLPKPISGXFFGRYGKVMEVVIMYDQXKKKSXG 485
RA+ KNR+ + V T R ++G + + +F +YG V + I+ D+ +K G
Sbjct: 59 RAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRG 118
Query: 486 XGFLSFEDEXS 518
GF++F+D S
Sbjct: 119 FGFVTFDDHDS 129
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 71.3 bits (167), Expect = 5e-13
Identities = 32/96 (33%), Positives = 59/96 (61%), Gaps = 1/96 (1%)
Frame = +2
Query: 134 LQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQNGPHQLDGRTIDPKPC 313
++ ++S++GE+ D +VM++ + RSRGFGFVTF+ + V+ ++ PH +DG+T+DPK
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 314 NPR-TLQKPKRGGGYPKVFLGGLPSNVTETDLRXIF 418
PR + + ++++ G+ + TE L F
Sbjct: 61 VPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYF 96
Score = 49.6 bits (113), Expect = 2e-06
Identities = 22/71 (30%), Positives = 40/71 (56%)
Frame = +2
Query: 89 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 268
+L+V G+ + +++ L YF++YG V ++ + + + RGFGFVTF D V+ +
Sbjct: 77 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 136
Query: 269 GPHQLDGRTID 301
H ++G D
Sbjct: 137 KSHMVNGHRCD 147
Score = 37.5 bits (83), Expect = 0.007
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Frame = +3
Query: 309 RAILALFKNRNVA-VDTLRCSLAGCHRTLPKPISGXFFGRYGKVMEVVIMYDQXKKKSXG 485
RA+ KNR+ + V T R ++G + + +F +YG V + I+ D+ +K G
Sbjct: 59 RAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRG 118
Query: 486 XGFLSFEDEXS 518
GF++F+D S
Sbjct: 119 FGFVTFDDHDS 129
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 64.5 bits (150), Expect = 5e-11
Identities = 40/116 (34%), Positives = 59/116 (50%), Gaps = 1/116 (0%)
Frame = +2
Query: 74 DDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVN 253
D + L V G+ ++T+ E Q+YF G V+ C + + S+ G S+GFGFV + N
Sbjct: 169 DSQPVDLIVLGVDFKTTDECFQKYFEDIGTVVFCEIKRKSD-GNSKGFGFVRMSSVGEQN 227
Query: 254 LVLQNGPHQLDGRTIDPKPCNPRTLQ-KPKRGGGYPKVFLGGLPSNVTETDLRXIF 418
VL H +DGR D K + R Q +P ++F+G L V E LR +F
Sbjct: 228 KVLAIPQHMIDGRRCDVKVPDGRDKQGRP----SISRIFVGRLTDKVDEHQLRKVF 279
Score = 28.7 bits (61), Expect = 3.2
Identities = 20/91 (21%), Positives = 39/91 (42%), Gaps = 2/91 (2%)
Frame = +2
Query: 89 KLFVGGLSWETSQENLQRYFSRYGE-VIDCVVMKNSESGRS-RGFGFVTFADPSLVNLVL 262
++FVG L+ + + L++ F + I+ V+ + + RGF FVT + ++
Sbjct: 260 RIFVGRLTDKVDEHQLRKVFGDEAKSYIETAVVTDVFIPKPFRGFAFVTLSSAEAAERIV 319
Query: 263 QNGPHQLDGRTIDPKPCNPRTLQKPKRGGGY 355
G ++G ++ PR G Y
Sbjct: 320 SKGSLTVNGLSVGLSIAQPREENNQSVGPDY 350
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 58.0 bits (134), Expect = 5e-09
Identities = 25/68 (36%), Positives = 42/68 (61%)
Frame = +2
Query: 89 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 268
K+FVGGL + TS + L YF ++G++ + VV+ + + +SRG+GFVT D + ++
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKD 95
Query: 269 GPHQLDGR 292
+DGR
Sbjct: 96 PNPIIDGR 103
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 55.6 bits (128), Expect = 2e-08
Identities = 26/66 (39%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Frame = +2
Query: 50 MRMNP-DMDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFV 226
++M P D ++ + KLF+G LS + ++ENL+ F+++G + DC V+++ + G+SRG FV
Sbjct: 129 VQMKPADTENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD-QDGKSRGCAFV 187
Query: 227 TFADPS 244
TF + S
Sbjct: 188 TFTNRS 193
Score = 46.8 bits (106), Expect = 1e-05
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 8/128 (6%)
Frame = +2
Query: 59 NPDMDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF-- 232
+P D + K+FVG + + ++ + +R F +YG V C ++++ + S+G FVTF
Sbjct: 46 SPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYH 105
Query: 233 ------ADPSLVNLVLQNGPHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGGLPSNVT 394
A +L N+ + G H + KP + T + +R K+F+G L
Sbjct: 106 RKDAIEAQGALHNIKVIEGMH----HPVQMKPAD--TENRNER-----KLFIGQLSKKHN 154
Query: 395 ETDLRXIF 418
E +LR IF
Sbjct: 155 EENLREIF 162
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 55.6 bits (128), Expect = 2e-08
Identities = 26/66 (39%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Frame = +2
Query: 50 MRMNP-DMDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFV 226
++M P D ++ + KLF+G LS + ++ENL+ F+++G + DC V+++ + G+SRG FV
Sbjct: 129 VQMKPADTENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD-QDGKSRGCAFV 187
Query: 227 TFADPS 244
TF + S
Sbjct: 188 TFTNRS 193
Score = 46.8 bits (106), Expect = 1e-05
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 8/128 (6%)
Frame = +2
Query: 59 NPDMDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF-- 232
+P D + K+FVG + + ++ + +R F +YG V C ++++ + S+G FVTF
Sbjct: 46 SPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYH 105
Query: 233 ------ADPSLVNLVLQNGPHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGGLPSNVT 394
A +L N+ + G H + KP + T + +R K+F+G L
Sbjct: 106 RKDAIEAQGALHNIKVIEGMH----HPVQMKPAD--TENRNER-----KLFIGQLSKKHN 154
Query: 395 ETDLRXIF 418
E +LR IF
Sbjct: 155 EENLREIF 162
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 55.6 bits (128), Expect = 2e-08
Identities = 26/66 (39%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Frame = +2
Query: 50 MRMNP-DMDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFV 226
++M P D ++ + KLF+G LS + ++ENL+ F+++G + DC V+++ + G+SRG FV
Sbjct: 129 VQMKPADTENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD-QDGKSRGCAFV 187
Query: 227 TFADPS 244
TF + S
Sbjct: 188 TFTNRS 193
Score = 46.8 bits (106), Expect = 1e-05
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 8/128 (6%)
Frame = +2
Query: 59 NPDMDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF-- 232
+P D + K+FVG + + ++ + +R F +YG V C ++++ + S+G FVTF
Sbjct: 46 SPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYH 105
Query: 233 ------ADPSLVNLVLQNGPHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGGLPSNVT 394
A +L N+ + G H + KP + T + +R K+F+G L
Sbjct: 106 RKDAIEAQGALHNIKVIEGMH----HPVQMKPAD--TENRNER-----KLFIGQLSKKHN 154
Query: 395 ETDLRXIF 418
E +LR IF
Sbjct: 155 EENLREIF 162
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 55.6 bits (128), Expect = 2e-08
Identities = 26/66 (39%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Frame = +2
Query: 50 MRMNP-DMDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFV 226
++M P D ++ + KLF+G LS + ++ENL+ F+++G + DC V+++ + G+SRG FV
Sbjct: 129 VQMKPADTENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD-QDGKSRGCAFV 187
Query: 227 TFADPS 244
TF + S
Sbjct: 188 TFTNRS 193
Score = 46.8 bits (106), Expect = 1e-05
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 8/128 (6%)
Frame = +2
Query: 59 NPDMDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF-- 232
+P D + K+FVG + + ++ + +R F +YG V C ++++ + S+G FVTF
Sbjct: 46 SPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYH 105
Query: 233 ------ADPSLVNLVLQNGPHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGGLPSNVT 394
A +L N+ + G H + KP + T + +R K+F+G L
Sbjct: 106 RKDAIEAQGALHNIKVIEGMH----HPVQMKPAD--TENRNER-----KLFIGQLSKKHN 154
Query: 395 ETDLRXIF 418
E +LR IF
Sbjct: 155 EENLREIF 162
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 55.6 bits (128), Expect = 2e-08
Identities = 26/66 (39%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Frame = +2
Query: 50 MRMNP-DMDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFV 226
++M P D ++ + KLF+G LS + ++ENL+ F+++G + DC V+++ + G+SRG FV
Sbjct: 129 VQMKPADTENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD-QDGKSRGCAFV 187
Query: 227 TFADPS 244
TF + S
Sbjct: 188 TFTNRS 193
Score = 46.8 bits (106), Expect = 1e-05
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 8/128 (6%)
Frame = +2
Query: 59 NPDMDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF-- 232
+P D + K+FVG + + ++ + +R F +YG V C ++++ + S+G FVTF
Sbjct: 46 SPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYH 105
Query: 233 ------ADPSLVNLVLQNGPHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGGLPSNVT 394
A +L N+ + G H + KP + T + +R K+F+G L
Sbjct: 106 RKDAIEAQGALHNIKVIEGMH----HPVQMKPAD--TENRNER-----KLFIGQLSKKHN 154
Query: 395 ETDLRXIF 418
E +LR IF
Sbjct: 155 EENLREIF 162
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 55.6 bits (128), Expect = 2e-08
Identities = 26/66 (39%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Frame = +2
Query: 50 MRMNP-DMDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFV 226
++M P D ++ + KLF+G LS + ++ENL+ F+++G + DC V+++ + G+SRG FV
Sbjct: 129 VQMKPADTENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD-QDGKSRGCAFV 187
Query: 227 TFADPS 244
TF + S
Sbjct: 188 TFTNRS 193
Score = 46.8 bits (106), Expect = 1e-05
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 8/128 (6%)
Frame = +2
Query: 59 NPDMDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF-- 232
+P D + K+FVG + + ++ + +R F +YG V C ++++ + S+G FVTF
Sbjct: 46 SPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYH 105
Query: 233 ------ADPSLVNLVLQNGPHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGGLPSNVT 394
A +L N+ + G H + KP + T + +R K+F+G L
Sbjct: 106 RKDAIEAQGALHNIKVIEGMH----HPVQMKPAD--TENRNER-----KLFIGQLSKKHN 154
Query: 395 ETDLRXIF 418
E +LR IF
Sbjct: 155 EENLREIF 162
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 54.8 bits (126), Expect = 4e-08
Identities = 23/84 (27%), Positives = 42/84 (50%)
Frame = +2
Query: 92 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQNG 271
+++ + W T + L+ YF RYG + + + ++G RGF +TF N ++
Sbjct: 27 VYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITFDSKDGANKAIEQR 86
Query: 272 PHQLDGRTIDPKPCNPRTLQKPKR 343
PH +DG +D +P P + K+
Sbjct: 87 PHVIDGDRVDVEPYIPLISKNKKK 110
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 53.2 bits (122), Expect = 1e-07
Identities = 21/77 (27%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Frame = +2
Query: 71 DDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLV 250
+D + +FVG +S++ S++ ++ FS+ G V+ ++ + E+G+ +G+GF+ F D
Sbjct: 13 NDRSQRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTA 72
Query: 251 NLVLQN-GPHQLDGRTI 298
+ ++N ++L GR +
Sbjct: 73 EVAIRNLNGYELSGRIL 89
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 53.2 bits (122), Expect = 1e-07
Identities = 30/101 (29%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Frame = +2
Query: 59 NPDMDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFAD 238
NP +D LFVG +++ETS+ L+R F YG+ I + M + E+G+ RG+ F+ ++D
Sbjct: 95 NPRASEDPYRTLFVGRINYETSESKLRREFEAYGK-IKKLTMVHDEAGKPRGYAFIEYSD 153
Query: 239 PSLVNLVLQNGPH-QLDGR--TIDPKPCNPRTLQKPKRGGG 352
+ ++ + ++DG+ +D + + P+R GG
Sbjct: 154 KAEMHTAYKKADGIKVDGKRLVVDYERGRTQKTWLPRRLGG 194
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 49.2 bits (112), Expect = 2e-06
Identities = 19/59 (32%), Positives = 40/59 (67%)
Frame = +2
Query: 92 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 268
+++GGLS+ S+ ++ FS+YGEV++ ++++ ++G+S+GF F+ + D L + N
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDN 98
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 48.4 bits (110), Expect = 4e-06
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
Frame = +2
Query: 56 MNPDMDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFA 235
MN + + K L+VGG + + +++ L F +G+V+ + + ESG+ RGFGFV F
Sbjct: 1 MNTNFPHNRKRTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFD 60
Query: 236 DPSLVNLVLQN-GPHQLDGRTI 298
+ + N +L G+TI
Sbjct: 61 MAEDAAMAIDNMNESELFGKTI 82
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/59 (35%), Positives = 39/59 (66%)
Frame = +2
Query: 56 MNPDMDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF 232
M +D + +FVG LS + S E L+ F+++GEV + V+++ ++ +S+G+GFV+F
Sbjct: 125 MEMRIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSF 183
Score = 28.3 bits (60), Expect = 4.3
Identities = 10/32 (31%), Positives = 21/32 (65%)
Frame = +2
Query: 92 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMK 187
++VG +S +T+ +L+ FS YG++ + + K
Sbjct: 239 VYVGNISQQTTDADLRDLFSTYGDIAEVRIFK 270
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 46.8 bits (106), Expect = 1e-05
Identities = 36/128 (28%), Positives = 62/128 (48%), Gaps = 8/128 (6%)
Frame = +2
Query: 59 NPDMDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF-- 232
+P D + K+FVG + + ++ + +R F +YG V C ++++ + S+G FVTF
Sbjct: 46 SPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTFYH 105
Query: 233 ------ADPSLVNLVLQNGPHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGGLPSNVT 394
A +L N+ + G H + KP + T + +R K+F+G L
Sbjct: 106 RKDAIEAQGALHNIKVIEGMH----HPVQMKPAD--TENRNER-----KLFIGQLSKKHN 154
Query: 395 ETDLRXIF 418
E +LR IF
Sbjct: 155 EENLREIF 162
Score = 46.8 bits (106), Expect = 1e-05
Identities = 21/56 (37%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Frame = +2
Query: 50 MRMNP-DMDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRG 214
++M P D ++ + KLF+G LS + ++ENL+ F+++G + DC V+++ + G+SRG
Sbjct: 129 VQMKPADTENRNERKLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRD-QDGKSRG 183
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 46.0 bits (104), Expect = 2e-05
Identities = 32/122 (26%), Positives = 60/122 (49%), Gaps = 2/122 (1%)
Frame = +2
Query: 62 PDMDDDE-KGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFA- 235
P++D E K L + L +QE ++ F+ GE+ C ++++ +G+S G+GFV +
Sbjct: 33 PNVDIGESKTNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVR 92
Query: 236 DPSLVNLVLQNGPHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGGLPSNVTETDLRXI 415
+ + V +L +TI P Q +G +++ G+P ++T +L I
Sbjct: 93 EEDALRAVSSFNGLRLQNKTIKVSYARPSNDQ--IKGS---NLYVSGIPKSMTLHELESI 147
Query: 416 FR 421
FR
Sbjct: 148 FR 149
Score = 37.1 bits (82), Expect = 0.009
Identities = 16/57 (28%), Positives = 30/57 (52%)
Frame = +2
Query: 62 PDMDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF 232
P D + L+V G+ + L+ F +G++I ++ ++ +G S+G GFV F
Sbjct: 120 PSNDQIKGSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRF 176
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 45.6 bits (103), Expect = 3e-05
Identities = 20/54 (37%), Positives = 33/54 (61%)
Frame = +2
Query: 80 EKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADP 241
E G+LF+ L + T +++LQ F +YGEV + V+ + ++G +GF V F P
Sbjct: 277 ETGRLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFP 330
Score = 31.1 bits (67), Expect = 0.61
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +2
Query: 71 DDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKN-SESGRSRGFGFVTF 232
+ E KL V L +E S + ++ F +G V + K + + RGFGFV F
Sbjct: 743 EQGECTKLLVRNLPFEASVKEVETLFETFGAVKTIRIPKKPGQKQQHRGFGFVDF 797
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 45.6 bits (103), Expect = 3e-05
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +2
Query: 92 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADP-SLVNLVLQN 268
++VG ++T++E L +FS G++ + ++ + E+GR RGF F+ FA+ S V Q
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQM 66
Query: 269 GPHQLDGRTI 298
+ +GR +
Sbjct: 67 NGAEFNGRPL 76
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +2
Query: 92 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFAD 238
+FV QE L FS++GE+ VVM +++ G+ +GFGFV FAD
Sbjct: 240 VFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFAD 287
Score = 41.1 bits (92), Expect = 6e-04
Identities = 19/50 (38%), Positives = 31/50 (62%)
Frame = +2
Query: 92 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADP 241
L+V + + + + L+ +FS +G + VM + E+GRS+GFGFV F P
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVD-ENGRSKGFGFVCFEKP 393
Score = 37.1 bits (82), Expect = 0.009
Identities = 29/120 (24%), Positives = 50/120 (41%), Gaps = 4/120 (3%)
Frame = +2
Query: 86 GKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQ 265
G +F+ L +++ FS +G ++ C V + E G S+G+GFV F ++
Sbjct: 145 GNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDE-GNSKGYGFVHFETEHSAQTAIE 203
Query: 266 --NGPHQLDGRTIDPK--PCNPRTLQKPKRGGGYPKVFLGGLPSNVTETDLRXIFRTLWE 433
NG D + K P R + + G Y VF+ ++ + L +F E
Sbjct: 204 KVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGE 263
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 45.6 bits (103), Expect = 3e-05
Identities = 21/49 (42%), Positives = 30/49 (61%)
Frame = +2
Query: 92 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFAD 238
+FV QE L FS++GE+ VVM +++ G+ +GFGFV FAD
Sbjct: 240 VFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDAQ-GKPKGFGFVAFAD 287
Score = 41.1 bits (92), Expect = 6e-04
Identities = 19/50 (38%), Positives = 31/50 (62%)
Frame = +2
Query: 92 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADP 241
L+V + + + + L+ +FS +G + VM + E+GRS+GFGFV F P
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVD-ENGRSKGFGFVCFEKP 393
Score = 37.1 bits (82), Expect = 0.009
Identities = 29/120 (24%), Positives = 50/120 (41%), Gaps = 4/120 (3%)
Frame = +2
Query: 86 GKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQ 265
G +F+ L +++ FS +G ++ C V + E G S+G+GFV F ++
Sbjct: 145 GNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDE-GNSKGYGFVHFETEHSAQTAIE 203
Query: 266 --NGPHQLDGRTIDPK--PCNPRTLQKPKRGGGYPKVFLGGLPSNVTETDLRXIFRTLWE 433
NG D + K P R + + G Y VF+ ++ + L +F E
Sbjct: 204 KVNGMLLSDKKVYVGKFQPRAQRMKELGESGLKYTNVFVKNFGEHLDQEKLSAMFSKFGE 263
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 45.6 bits (103), Expect = 3e-05
Identities = 23/69 (33%), Positives = 39/69 (56%)
Frame = +2
Query: 89 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 268
++FVGG T++ L+ +F ++ V D V M S G+S+G+GF+TF + +
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKD-VKMVKSLDGQSKGYGFITFETEDQAEEIRKL 125
Query: 269 GPHQLDGRT 295
P QL+ R+
Sbjct: 126 TPKQLEFRS 134
Score = 28.7 bits (61), Expect = 3.2
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +2
Query: 359 KVFLGGLPSNVTETDLRXIF 418
++F+GG P++ TET+LR F
Sbjct: 67 RIFVGGFPTSTTETELREHF 86
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 45.6 bits (103), Expect = 3e-05
Identities = 23/69 (33%), Positives = 39/69 (56%)
Frame = +2
Query: 89 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 268
++FVGG T++ L+ +F ++ V D V M S G+S+G+GF+TF + +
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKD-VKMVKSLDGQSKGYGFITFETEDQAEEIRKL 126
Query: 269 GPHQLDGRT 295
P QL+ R+
Sbjct: 127 TPKQLEFRS 135
Score = 28.7 bits (61), Expect = 3.2
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +2
Query: 359 KVFLGGLPSNVTETDLRXIF 418
++F+GG P++ TET+LR F
Sbjct: 68 RIFVGGFPTSTTETELREHF 87
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 44.8 bits (101), Expect = 5e-05
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = +2
Query: 92 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQNG 271
L + LS++T+ +L+R F RYG++ D + ++ S +S+GFGFV F + L
Sbjct: 21 LKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRT 80
Query: 272 PHQL-DGRTI 298
+L DGR +
Sbjct: 81 DGKLVDGREL 90
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 417 FGRYGKVMEVVIMYDQXKKKSXGXGFLSF 503
F RYG + +V I D+ ++S G GF+ F
Sbjct: 39 FERYGDIGDVHIPRDKYSRQSKGFGFVRF 67
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 44.8 bits (101), Expect = 5e-05
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = +2
Query: 92 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQNG 271
L + LS++T+ +L+R F RYG++ D + ++ S +S+GFGFV F + L
Sbjct: 21 LKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRT 80
Query: 272 PHQL-DGRTI 298
+L DGR +
Sbjct: 81 DGKLVDGREL 90
Score = 27.9 bits (59), Expect = 5.7
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +3
Query: 417 FGRYGKVMEVVIMYDQXKKKSXGXGFLSF 503
F RYG + +V I D+ ++S G GF+ F
Sbjct: 39 FERYGDIGDVHIPRDKYSRQSKGFGFVRF 67
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 44.4 bits (100), Expect = 6e-05
Identities = 18/49 (36%), Positives = 33/49 (67%)
Frame = +2
Query: 92 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFAD 238
++VG ++T++++L YFS+ G V + ++ + E+GR RGF FV F +
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTE 54
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/48 (37%), Positives = 31/48 (64%)
Frame = +2
Query: 122 SQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQ 265
++E L++ F+++G + C VM + G+S+GFGFV FA+P +Q
Sbjct: 225 NKETLEKVFAKFGNITSCEVM--TVEGKSKGFGFVAFANPEEAETAVQ 270
Score = 41.9 bits (94), Expect = 3e-04
Identities = 20/50 (40%), Positives = 28/50 (56%)
Frame = +2
Query: 92 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADP 241
L+V L + L++ F YG + VM + E+GRS+GFGFV F P
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEKP 367
Score = 37.1 bits (82), Expect = 0.009
Identities = 34/152 (22%), Positives = 63/152 (41%), Gaps = 4/152 (2%)
Frame = +2
Query: 59 NPDMDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF-A 235
+P M G +F+ L +++ FS +G ++ C V + E G S+G+GFV F
Sbjct: 111 DPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAID-EDGFSKGYGFVHFET 169
Query: 236 DPSLVNLVLQNGPHQLDGRTIDPKPCNPRTLQKPKRG---GGYPKVFLGGLPSNVTETDL 406
+ + N + + L G+ + PR + + G + V++ + + L
Sbjct: 170 EEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETL 229
Query: 407 RXIFRTLWEGHGGGHYV*SXEEKVXGFXILVF 502
+F G+ V + E K GF + F
Sbjct: 230 EKVFAKF--GNITSCEVMTVEGKSKGFGFVAF 259
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/48 (37%), Positives = 31/48 (64%)
Frame = +2
Query: 122 SQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQ 265
++E L++ F+++G + C VM + G+S+GFGFV FA+P +Q
Sbjct: 165 NKETLEKLFAKFGNITSCEVM--TVEGKSKGFGFVAFANPEEAETAVQ 210
Score = 41.9 bits (94), Expect = 3e-04
Identities = 20/50 (40%), Positives = 28/50 (56%)
Frame = +2
Query: 92 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADP 241
L+V L + L++ F YG + VM + E+GRS+GFGFV F P
Sbjct: 259 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEKP 307
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/48 (37%), Positives = 31/48 (64%)
Frame = +2
Query: 122 SQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQ 265
++E L++ F+++G + C VM + G+S+GFGFV FA+P +Q
Sbjct: 162 NKETLEKLFAKFGNITSCEVM--TVEGKSKGFGFVAFANPEEAETAVQ 207
Score = 41.9 bits (94), Expect = 3e-04
Identities = 20/50 (40%), Positives = 28/50 (56%)
Frame = +2
Query: 92 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADP 241
L+V L + L++ F YG + VM + E+GRS+GFGFV F P
Sbjct: 256 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEKP 304
Score = 36.7 bits (81), Expect = 0.012
Identities = 34/152 (22%), Positives = 63/152 (41%), Gaps = 4/152 (2%)
Frame = +2
Query: 59 NPDMDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF-A 235
+P M G +F+ L +++ FS +G ++ C V + E G S+G+GFV F
Sbjct: 48 DPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAID-EDGFSKGYGFVHFET 106
Query: 236 DPSLVNLVLQNGPHQLDGRTIDPKPCNPRTLQKPKRG---GGYPKVFLGGLPSNVTETDL 406
+ + N + + L G+ + PR + + G + V++ + + L
Sbjct: 107 EEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETL 166
Query: 407 RXIFRTLWEGHGGGHYV*SXEEKVXGFXILVF 502
+F G+ V + E K GF + F
Sbjct: 167 EKLFAKF--GNITSCEVMTVEGKSKGFGFVAF 196
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 43.6 bits (98), Expect = 1e-04
Identities = 18/48 (37%), Positives = 31/48 (64%)
Frame = +2
Query: 122 SQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQ 265
++E L++ F+++G + C VM + G+S+GFGFV FA+P +Q
Sbjct: 225 NKETLEKLFAKFGNITSCEVM--TVEGKSKGFGFVAFANPEEAETAVQ 270
Score = 41.9 bits (94), Expect = 3e-04
Identities = 20/50 (40%), Positives = 28/50 (56%)
Frame = +2
Query: 92 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADP 241
L+V L + L++ F YG + VM + E+GRS+GFGFV F P
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTD-ENGRSKGFGFVCFEKP 367
Score = 36.7 bits (81), Expect = 0.012
Identities = 34/152 (22%), Positives = 63/152 (41%), Gaps = 4/152 (2%)
Frame = +2
Query: 59 NPDMDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF-A 235
+P M G +F+ L +++ FS +G ++ C V + E G S+G+GFV F
Sbjct: 111 DPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAID-EDGFSKGYGFVHFET 169
Query: 236 DPSLVNLVLQNGPHQLDGRTIDPKPCNPRTLQKPKRG---GGYPKVFLGGLPSNVTETDL 406
+ + N + + L G+ + PR + + G + V++ + + L
Sbjct: 170 EEAAQNAIQKVNGMLLAGKKVFVGKFQPRAQRNRELGETAKQFTNVYVKNFGDHYNKETL 229
Query: 407 RXIFRTLWEGHGGGHYV*SXEEKVXGFXILVF 502
+F G+ V + E K GF + F
Sbjct: 230 EKLFAKF--GNITSCEVMTVEGKSKGFGFVAF 259
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 43.2 bits (97), Expect = 1e-04
Identities = 17/47 (36%), Positives = 32/47 (68%)
Frame = +2
Query: 92 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF 232
+FVG LS E + L+ F +G+V D V++++ + +S+G+GFV++
Sbjct: 24 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSY 70
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 43.2 bits (97), Expect = 1e-04
Identities = 17/47 (36%), Positives = 32/47 (68%)
Frame = +2
Query: 92 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF 232
+FVG LS E + L+ F +G+V D V++++ + +S+G+GFV++
Sbjct: 34 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSY 80
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 43.2 bits (97), Expect = 1e-04
Identities = 17/47 (36%), Positives = 32/47 (68%)
Frame = +2
Query: 92 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF 232
+FVG LS E + L+ F +G+V D V++++ + +S+G+GFV++
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSY 183
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 43.2 bits (97), Expect = 1e-04
Identities = 17/47 (36%), Positives = 32/47 (68%)
Frame = +2
Query: 92 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF 232
+FVG LS E + L+ F +G+V D V++++ + +S+G+GFV++
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSY 151
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 42.3 bits (95), Expect = 2e-04
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +2
Query: 47 GMRMNPDMDDDEKGK-LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGF 223
G D ++ + K L V LS T++++L+ F +GE+ C ++ + SG SRGFGF
Sbjct: 62 GRNQQYDRENPQPSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGF 121
Query: 224 VTF 232
+ F
Sbjct: 122 IYF 124
Score = 28.3 bits (60), Expect = 4.3
Identities = 10/29 (34%), Positives = 18/29 (62%)
Frame = +3
Query: 417 FGRYGKVMEVVIMYDQXKKKSXGXGFLSF 503
FG +G++ + ++YD+ S G GF+ F
Sbjct: 96 FGEFGEINKCDLVYDRPSGNSRGFGFIYF 124
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 41.9 bits (94), Expect = 3e-04
Identities = 24/83 (28%), Positives = 42/83 (50%)
Frame = +2
Query: 74 DDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVN 253
D+ ++F G L E S E L + F +Y V++ S + +S+G+GFV+F D +
Sbjct: 199 DENDFRVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSE--D 256
Query: 254 LVLQNGPHQLDGRTIDPKPCNPR 322
V ++DG+ + +P R
Sbjct: 257 YV--RAMREMDGKYVGNRPIKLR 277
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 41.5 bits (93), Expect = 4e-04
Identities = 16/49 (32%), Positives = 32/49 (65%)
Frame = +2
Query: 92 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFAD 238
++VG + ++ ++E + YF+ G V + ++ + E+GR RGF FV F++
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSE 56
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 41.5 bits (93), Expect = 4e-04
Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +2
Query: 92 LFVGGLSWETSQENLQRYFS-RYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 268
+FVG L +E +++ L +FS + G V ++++ ++G+ +GF FV F S V+L L
Sbjct: 248 IFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFKQDSSVSLALSM 307
Query: 269 GPHQLDGRTI 298
+++ R +
Sbjct: 308 ETIKMEKRDL 317
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 41.1 bits (92), Expect = 6e-04
Identities = 18/54 (33%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Frame = +2
Query: 83 KGKL-FVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADP 241
+GK+ F+ LS++T +E ++ S++G++ ++ K +SG S+G FV F+ P
Sbjct: 261 EGKVVFLRNLSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFSTP 314
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +2
Query: 77 DEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCV-VMKNSESGRSRGFGFVTFA 235
D +FVG L E ++ L FS +G ++ +M++ +SG S+GF F+ FA
Sbjct: 97 DVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFA 150
Score = 35.1 bits (77), Expect = 0.037
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +2
Query: 50 MRMNPDMDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVT 229
M P ++ ++ ++VGGL + S+ L + G V+ + K+ + +GFGFV
Sbjct: 1 MSAGPIVERNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVE 60
Query: 230 F 232
F
Sbjct: 61 F 61
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +2
Query: 77 DEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCV-VMKNSESGRSRGFGFVTFA 235
D +FVG L E ++ L FS +G ++ +M++ +SG S+GF F+ FA
Sbjct: 107 DVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFA 160
Score = 35.1 bits (77), Expect = 0.037
Identities = 17/61 (27%), Positives = 31/61 (50%)
Frame = +2
Query: 50 MRMNPDMDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVT 229
M P ++ ++ ++VGGL + S+ L + G V+ + K+ + +GFGFV
Sbjct: 11 MSAGPIVERNQDATIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVE 70
Query: 230 F 232
F
Sbjct: 71 F 71
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 39.1 bits (87), Expect = 0.002
Identities = 28/96 (29%), Positives = 50/96 (52%)
Frame = +2
Query: 89 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 268
++++G L+ S+++++ +F YG++ D V++KN GFGFV F D ++
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRD-VLLKN-------GFGFVEFDD----KRDAED 51
Query: 269 GPHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGG 376
H L+G+ + + KP+ GGG F GG
Sbjct: 52 AVHDLNGKELGGERV-ILDYSKPRGGGGDRGGFGGG 86
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 39.1 bits (87), Expect = 0.002
Identities = 28/96 (29%), Positives = 50/96 (52%)
Frame = +2
Query: 89 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 268
++++G L+ S+++++ +F YG++ D V++KN GFGFV F D ++
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRD-VLLKN-------GFGFVEFDD----KRDAED 51
Query: 269 GPHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGG 376
H L+G+ + + KP+ GGG F GG
Sbjct: 52 AVHDLNGKELGGERV-ILDYSKPRGGGGDRGGFGGG 86
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 39.1 bits (87), Expect = 0.002
Identities = 28/96 (29%), Positives = 50/96 (52%)
Frame = +2
Query: 89 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 268
++++G L+ S+++++ +F YG++ D V++KN GFGFV F D ++
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRD-VLLKN-------GFGFVEFDD----KRDAED 51
Query: 269 GPHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGG 376
H L+G+ + + KP+ GGG F GG
Sbjct: 52 AVHDLNGKELGGERV-ILDYSKPRGGGGDRGGFGGG 86
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 38.7 bits (86), Expect = 0.003
Identities = 17/47 (36%), Positives = 31/47 (65%)
Frame = +2
Query: 92 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF 232
LFV L+ T+ E+L+ FSR+G++ +C ++++ SG S + F+ F
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEF 289
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 38.7 bits (86), Expect = 0.003
Identities = 17/47 (36%), Positives = 31/47 (65%)
Frame = +2
Query: 92 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF 232
LFV L+ T+ E+L+ FSR+G++ +C ++++ SG S + F+ F
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEF 289
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 38.7 bits (86), Expect = 0.003
Identities = 17/47 (36%), Positives = 31/47 (65%)
Frame = +2
Query: 92 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF 232
LFV L+ T+ E+L+ FSR+G++ +C ++++ SG S + F+ F
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEF 220
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 38.7 bits (86), Expect = 0.003
Identities = 14/47 (29%), Positives = 30/47 (63%)
Frame = +2
Query: 92 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF 232
+FVG L E L+ F ++GEV + +++++ + + +G+GFV++
Sbjct: 134 VFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSY 180
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +2
Query: 71 DDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLV 250
++ ++ L + ++ +T +L+ +FS G V D ++ +S +GRS+G +V F D V
Sbjct: 20 EERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESV 79
Query: 251 NLVLQNGPHQLDG 289
L L +L G
Sbjct: 80 PLGLALNGQRLMG 92
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 38.3 bits (85), Expect = 0.004
Identities = 21/73 (28%), Positives = 39/73 (53%)
Frame = +2
Query: 71 DDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLV 250
++ ++ L + ++ +T +L+ +FS G V D ++ +S +GRS+G +V F D V
Sbjct: 165 EERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWDEESV 224
Query: 251 NLVLQNGPHQLDG 289
L L +L G
Sbjct: 225 PLGLALNGQRLMG 237
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 37.9 bits (84), Expect = 0.005
Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = +2
Query: 56 MNPDMDDDEKG---KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFV 226
M P ++ EK ++VG + W+++ ++ +F+ G+V + K+ +G + F FV
Sbjct: 33 MAPTAEEQEKTDARSVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFV 92
Query: 227 TFADPSLVNLVL 262
F V L L
Sbjct: 93 EFQKLESVQLAL 104
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 37.5 bits (83), Expect = 0.007
Identities = 18/52 (34%), Positives = 35/52 (67%)
Frame = +2
Query: 77 DEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF 232
D+K KLF+G LS + S++ ++ F+ +GE+ + V++ ++ G S+G FV +
Sbjct: 122 DDK-KLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGAD-GASKGCAFVKY 171
Score = 27.1 bits (57), Expect = 9.9
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 359 KVFLGGLPSNVTETDLRXIF 418
K+F+G +P N+ E DLR +F
Sbjct: 30 KLFVGQIPRNLEEKDLRHLF 49
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 37.5 bits (83), Expect = 0.007
Identities = 18/52 (34%), Positives = 35/52 (67%)
Frame = +2
Query: 77 DEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF 232
D+K KLF+G LS + S++ ++ F+ +GE+ + V++ ++ G S+G FV +
Sbjct: 122 DDK-KLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGAD-GASKGCAFVKY 171
Score = 27.1 bits (57), Expect = 9.9
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +2
Query: 359 KVFLGGLPSNVTETDLRXIF 418
K+F+G +P N+ E DLR +F
Sbjct: 30 KLFVGQIPRNLEEKDLRHLF 49
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 36.7 bits (81), Expect = 0.012
Identities = 26/93 (27%), Positives = 42/93 (45%), Gaps = 6/93 (6%)
Frame = +2
Query: 92 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQNG 271
++VG + + + E ++++F G V + + SG +GF +V F + + L
Sbjct: 80 VYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKEGMQNALAMT 139
Query: 272 PHQLDGRTI--DPKPCN----PRTLQKPKRGGG 352
L GR I DPK N T + P RG G
Sbjct: 140 DSLLRGRQIKVDPKRTNKPGMSTTNRPPFRGRG 172
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 36.7 bits (81), Expect = 0.012
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = +2
Query: 89 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 268
++++G L S +++ +F YG++ D V+MKN GFGFV F D + +
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSD-VIMKN-------GFGFVDFQDQRDAD----D 50
Query: 269 GPHQLDGRTIDPKPCNPRT-LQKPKRGGGY 355
H L+G+ + C R L+ P+R GY
Sbjct: 51 AVHDLNGKEL----CGERVILEFPRRKVGY 76
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 36.3 bits (80), Expect = 0.016
Identities = 15/50 (30%), Positives = 30/50 (60%)
Frame = +2
Query: 89 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFAD 238
+++VG + + ++ L F + G++ D +M + SG SRG+ FVT+ +
Sbjct: 201 EIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCN 250
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 35.1 bits (77), Expect = 0.037
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 1/91 (1%)
Frame = +2
Query: 80 EKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF-ADPSLVNL 256
EK K+FV + ++ + + L+ FS++G V V + G+ +G FV F + S
Sbjct: 681 EKSKVFVRNVHFQATDDELKALFSKFGTVTS-VRRVTHKDGKPKGIAFVDFDTEASAQKC 739
Query: 257 VLQNGPHQLDGRTIDPKPCNPRTLQKPKRGG 349
V L R ++ NP ++K K G
Sbjct: 740 VASGDKLMLRERELEVALSNP-PVKKDKSHG 769
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 35.1 bits (77), Expect = 0.037
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = +2
Query: 53 RMNPDMDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF 232
R D +L V + ++ + +L F + G V+D ++ N E G S+GFGFVT
Sbjct: 89 RSTSSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFN-ERG-SKGFGFVTM 146
Query: 233 ADP 241
+P
Sbjct: 147 QNP 149
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 35.1 bits (77), Expect = 0.037
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = +2
Query: 53 RMNPDMDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF 232
R D +L V + ++ + +L F + G V+D ++ N E G S+GFGFVT
Sbjct: 89 RSTSSSSTDGPRRLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFN-ERG-SKGFGFVTM 146
Query: 233 ADP 241
+P
Sbjct: 147 QNP 149
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 34.7 bits (76), Expect = 0.049
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 92 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADP 241
L++ GL T+ + L+ S+YG + + + + +G+GFV F P
Sbjct: 109 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESP 158
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 34.7 bits (76), Expect = 0.049
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 92 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADP 241
L++ GL T+ + L+ S+YG + + + + +G+GFV F P
Sbjct: 83 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESP 132
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 34.3 bits (75), Expect = 0.065
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +2
Query: 65 DMDDDEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF 232
D + ++ V L E +++ L+ F + G VI + ++ +G +GF FVTF
Sbjct: 169 DRNRSDENTCRVTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTF 224
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 33.9 bits (74), Expect = 0.086
Identities = 14/59 (23%), Positives = 29/59 (49%)
Frame = +2
Query: 77 DEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVN 253
D K+F+GGL +++ ++ +G + + G S+G+ F + DP+L +
Sbjct: 288 DSANKIFIGGLPNYLTEDQVKELLCSFGP-LKAFSLNVDSQGNSKGYAFAEYLDPTLTD 345
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 33.9 bits (74), Expect = 0.086
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Frame = +2
Query: 77 DEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNL 256
D +L V + + +L+ F ++G V D ++ N E G S+GFGFVT P
Sbjct: 150 DGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFN-ERG-SKGFGFVTMERPQDAER 207
Query: 257 VLQN-GPHQLDGRTIDPKPCNPRT-LQKPKRGGG 352
Q ++GR I+ R +K K GG
Sbjct: 208 ARQELHGSMIEGRKIEVNCATARVHSKKVKPTGG 241
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 33.9 bits (74), Expect = 0.086
Identities = 28/94 (29%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Frame = +2
Query: 77 DEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNL 256
D +L V + + +L+ F ++G V D ++ N E G S+GFGFVT P
Sbjct: 150 DGPKRLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFN-ERG-SKGFGFVTMERPQDAER 207
Query: 257 VLQN-GPHQLDGRTIDPKPCNPRT-LQKPKRGGG 352
Q ++GR I+ R +K K GG
Sbjct: 208 ARQELHGSMIEGRKIEVNCATARVHSKKVKPTGG 241
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 33.9 bits (74), Expect = 0.086
Identities = 14/59 (23%), Positives = 29/59 (49%)
Frame = +2
Query: 77 DEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVN 253
D K+F+GGL +++ ++ +G + + G S+G+ F + DP+L +
Sbjct: 288 DSANKIFIGGLPNYLTEDQVKELLCSFGP-LKAFSLNVDSQGNSKGYAFAEYLDPTLTD 345
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 33.9 bits (74), Expect = 0.086
Identities = 14/59 (23%), Positives = 29/59 (49%)
Frame = +2
Query: 77 DEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVN 253
D K+F+GGL +++ ++ +G + + G S+G+ F + DP+L +
Sbjct: 263 DSANKIFIGGLPNYLTEDQVKELLCSFGP-LKAFSLNVDSQGNSKGYAFAEYLDPTLTD 320
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 33.9 bits (74), Expect = 0.086
Identities = 14/59 (23%), Positives = 29/59 (49%)
Frame = +2
Query: 77 DEKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVN 253
D K+F+GGL +++ ++ +G + + G S+G+ F + DP+L +
Sbjct: 266 DSANKIFIGGLPNYLTEDQVKELLCSFGP-LKAFSLNVDSQGNSKGYAFAEYLDPTLTD 323
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 33.5 bits (73), Expect = 0.11
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +2
Query: 80 EKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFAD-PSLVNL 256
E K++VG L + ++ ++ F +YG I V +K SGR F FV F D +
Sbjct: 7 EDQKVYVGNLPGDVREKEVEDIFHKYGR-IKYVDIK---SGRGPAFAFVEFEDHRDAEDA 62
Query: 257 VLQNGPHQLDGRTI 298
V ++ DGR I
Sbjct: 63 VRARDGYEFDGRRI 76
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 33.5 bits (73), Expect = 0.11
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Frame = +2
Query: 80 EKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFAD-PSLVNL 256
E K++VG L + ++ ++ F +YG I V +K SGR F FV F D +
Sbjct: 7 EDQKVYVGNLPGDVREKEVEDIFHKYGR-IKYVDIK---SGRGPAFAFVEFEDHRDAEDA 62
Query: 257 VLQNGPHQLDGRTI 298
V ++ DGR I
Sbjct: 63 VRARDGYEFDGRRI 76
>U23484-7|ABB88232.1| 738|Caenorhabditis elegans Hypothetical
protein EEED8.10a protein.
Length = 738
Score = 33.1 bits (72), Expect = 0.15
Identities = 11/36 (30%), Positives = 23/36 (63%)
Frame = +2
Query: 89 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSE 196
K+ V +S + +Q LQ +FS+YG++ C++ + +
Sbjct: 113 KIVVSNISAKVTQSQLQSFFSQYGKITSCILPREEK 148
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 33.1 bits (72), Expect = 0.15
Identities = 12/48 (25%), Positives = 27/48 (56%)
Frame = +2
Query: 89 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF 232
+++V + + S+ +L+ F +GE++ C + + RGFG++ F
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEF 255
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 33.1 bits (72), Expect = 0.15
Identities = 12/48 (25%), Positives = 27/48 (56%)
Frame = +2
Query: 89 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF 232
+++V + + S+ +L+ F +GE++ C + + RGFG++ F
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEF 255
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 33.1 bits (72), Expect = 0.15
Identities = 12/48 (25%), Positives = 27/48 (56%)
Frame = +2
Query: 89 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTF 232
+++V + + S+ +L+ F +GE++ C + + RGFG++ F
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEF 255
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 32.7 bits (71), Expect = 0.20
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +2
Query: 80 EKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFAD 238
+ +FVG +S + S E +++ + G V +K S +G+ +GFGF F D
Sbjct: 45 DSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGS-NGKLQGFGFCHFTD 96
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 32.7 bits (71), Expect = 0.20
Identities = 17/53 (32%), Positives = 29/53 (54%)
Frame = +2
Query: 80 EKGKLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFAD 238
+ +FVG +S + S E +++ + G V +K S +G+ +GFGF F D
Sbjct: 45 DSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGS-NGKLQGFGFCHFTD 96
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 32.3 bits (70), Expect = 0.26
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 1/70 (1%)
Frame = +2
Query: 92 LFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN- 268
L+VG LS+ T ++ + F R G+V ++ + GF FV + L LQN
Sbjct: 39 LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTREDAELALQNI 98
Query: 269 GPHQLDGRTI 298
++D R I
Sbjct: 99 SNTRMDDRVI 108
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 31.9 bits (69), Expect = 0.35
Identities = 28/107 (26%), Positives = 43/107 (40%)
Frame = +2
Query: 89 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 268
K++VGGL + + + L+ F R+G + V + R GF FV + D ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVAR-----RPPGFAFVEYDDVR----DAED 54
Query: 269 GPHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGGLPSNVTETDLR 409
LDG I +RGGG GG ++ LR
Sbjct: 55 AVRALDGSRICGVRARVELSTGQRRGGGGRGGGFGGRGGGGRDSGLR 101
Score = 28.3 bits (60), Expect = 4.3
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 359 KVFLGGLPSNVTETDLRXIF 418
KV++GGLPS+ T +L IF
Sbjct: 4 KVYVGGLPSDATSQELEEIF 23
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 31.1 bits (67), Expect = 0.61
Identities = 26/98 (26%), Positives = 46/98 (46%), Gaps = 6/98 (6%)
Frame = +2
Query: 77 DEKGKLFVGGLSWE---TSQENLQRYFSRYGEVI---DCVVMKNSESGRSRGFGFVTFAD 238
DE K F+GGL ++ T E + ++ E + D ++ + +SG +GF +VTF +
Sbjct: 3 DEIFKAFIGGLPYDSIATDIETILKHCKFTDEELKKFDIHLVHDRDSGSFKGFAYVTFEN 62
Query: 239 PSLVNLVLQNGPHQLDGRTIDPKPCNPRTLQKPKRGGG 352
+N + +G + D K + + RGGG
Sbjct: 63 EQQMNTAI-SGLNGADFGNRVLKVNRAQQRDRSDRGGG 99
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 31.1 bits (67), Expect = 0.61
Identities = 24/88 (27%), Positives = 37/88 (42%)
Frame = +2
Query: 89 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 268
K++VGGL + + + L+ F R+G + V + R GF FV + D ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVAR-----RPPGFAFVEYDDVR----DAED 54
Query: 269 GPHQLDGRTIDPKPCNPRTLQKPKRGGG 352
LDG I +RGGG
Sbjct: 55 AVRALDGSRICGVRARVELSTGQRRGGG 82
Score = 28.3 bits (60), Expect = 4.3
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 359 KVFLGGLPSNVTETDLRXIF 418
KV++GGLPS+ T +L IF
Sbjct: 4 KVYVGGLPSDATSQELEEIF 23
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 31.1 bits (67), Expect = 0.61
Identities = 24/88 (27%), Positives = 37/88 (42%)
Frame = +2
Query: 89 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 268
K++VGGL + + + L+ F R+G + V + R GF FV + D ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWVAR-----RPPGFAFVEYDDVR----DAED 54
Query: 269 GPHQLDGRTIDPKPCNPRTLQKPKRGGG 352
LDG I +RGGG
Sbjct: 55 AVRALDGSRICGVRARVELSTGQRRGGG 82
Score = 28.3 bits (60), Expect = 4.3
Identities = 11/20 (55%), Positives = 15/20 (75%)
Frame = +2
Query: 359 KVFLGGLPSNVTETDLRXIF 418
KV++GGLPS+ T +L IF
Sbjct: 4 KVYVGGLPSDATSQELEEIF 23
>Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical
protein ZK863.7 protein.
Length = 305
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/83 (21%), Positives = 37/83 (44%)
Frame = +2
Query: 89 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 268
KLFVG L L++ F + +V +C ++KN + FV + + ++ +
Sbjct: 4 KLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKN--------YAFVHIEEDDVDPIITRL 55
Query: 269 GPHQLDGRTIDPKPCNPRTLQKP 337
+ +DG+ ++ K + P
Sbjct: 56 TGYTIDGKVVNIKKSTSKLRPTP 78
>U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein.
Length = 305
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/83 (21%), Positives = 37/83 (44%)
Frame = +2
Query: 89 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFADPSLVNLVLQN 268
KLFVG L L++ F + +V +C ++KN + FV + + ++ +
Sbjct: 4 KLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKN--------YAFVHIEEDDVDPIITRL 55
Query: 269 GPHQLDGRTIDPKPCNPRTLQKP 337
+ +DG+ ++ K + P
Sbjct: 56 TGYTIDGKVVNIKKSTSKLRPTP 78
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 29.5 bits (63), Expect = 1.9
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 146 FSRYGEVIDCVVMKNSESGRSRGFGFVTFADP 241
F + G V+D ++ N E G S+GFGFVT +P
Sbjct: 2 FEKVGPVVDVEIIFN-ERG-SKGFGFVTMQNP 31
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Frame = +2
Query: 89 KLFVGGLSWETSQENLQRYFSRYGEV-IDC-VVMKNSESGRSRGFGFVTF 232
K+FVGG+S +++ + ++F ++G V +D V K + G+S G ++
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSY 255
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Frame = +2
Query: 89 KLFVGGLSWETSQENLQRYFSRYGEV-IDC-VVMKNSESGRSRGFGFVTF 232
K+FVGG+S +++ + ++F ++G V +D V K + G+S G ++
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSY 255
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/50 (30%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Frame = +2
Query: 89 KLFVGGLSWETSQENLQRYFSRYGEV-IDC-VVMKNSESGRSRGFGFVTF 232
K+FVGG+S +++ + ++F ++G V +D V K + G+S G ++
Sbjct: 206 KVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKSIAIGSYSY 255
>Z81064-7|CAB02960.2| 382|Caenorhabditis elegans Hypothetical
protein F16B12.8 protein.
Length = 382
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +3
Query: 249 STSCYRMDLINLMAGPSTLSRAILALFKNRNVAVDTLRCSLAG 377
+T C+ +D++ G + LF + +D +RCSL G
Sbjct: 211 NTKCHGVDILRAPDGADIYPDEAIKLFPTDSKILDRIRCSLIG 253
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +2
Query: 359 KVFLGGLPSNVTETDLRXIF 418
KVF+GGLPS V E+D+ F
Sbjct: 89 KVFVGGLPSCVKESDILNFF 108
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 89 KLFVGGLSWETSQENLQRYFSRYGEV 166
K+FVGGL + ++ +FSRYG +
Sbjct: 89 KVFVGGLPSCVKESDILNFFSRYGRL 114
>AL031621-7|CAE46665.1| 382|Caenorhabditis elegans Hypothetical
protein F16B12.8 protein.
Length = 382
Score = 28.3 bits (60), Expect = 4.3
Identities = 12/43 (27%), Positives = 21/43 (48%)
Frame = +3
Query: 249 STSCYRMDLINLMAGPSTLSRAILALFKNRNVAVDTLRCSLAG 377
+T C+ +D++ G + LF + +D +RCSL G
Sbjct: 211 NTKCHGVDILRAPDGADIYPDEAIKLFPTDSKILDRIRCSLIG 253
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +2
Query: 338 KRGGGYPKVFLGGLPSNVTETDLRXIF 418
K+ G ++F+G LP+ V ET+L+ +F
Sbjct: 110 KKFTGRCRLFVGNLPNEVKETELKELF 136
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +2
Query: 338 KRGGGYPKVFLGGLPSNVTETDLRXIF 418
K+ G ++F+G LP+ V ET+L+ +F
Sbjct: 110 KKFTGRCRLFVGNLPNEVKETELKELF 136
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 27.9 bits (59), Expect = 5.7
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +2
Query: 338 KRGGGYPKVFLGGLPSNVTETDLRXIF 418
K+ G ++F+G LP+ V ET+L+ +F
Sbjct: 110 KKFTGRCRLFVGNLPNEVKETELKELF 136
>Z81139-8|CAB03483.2| 361|Caenorhabditis elegans Hypothetical
protein W05H5.7 protein.
Length = 361
Score = 27.5 bits (58), Expect = 7.5
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 578 FXSTCFPWRLMKCSWVTLST 519
F + CF WRL+K +W T
Sbjct: 313 FQNACFTWRLVKSAWTKPKT 332
>Z81062-15|CAB02950.2| 361|Caenorhabditis elegans Hypothetical
protein W05H5.7 protein.
Length = 361
Score = 27.5 bits (58), Expect = 7.5
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 578 FXSTCFPWRLMKCSWVTLST 519
F + CF WRL+K +W T
Sbjct: 313 FQNACFTWRLVKSAWTKPKT 332
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 89 KLFVGGLSWETSQENLQRYFSRYGEVIDCVVMKNSESGRSR 211
K+FVGG+ W+ ++ L+ F +G C V + R R
Sbjct: 296 KIFVGGVPWDITEAALKDSFGEFG---SCAVEWPGQEARYR 333
>Z82094-3|CAB05024.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 27.1 bits (57), Expect = 9.9
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +2
Query: 263 QNGPHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGGLPS 385
Q P QL +DP P+T K K+GGG PK P+
Sbjct: 1448 QPPPVQLPQVDVDP----PKTAAKRKKGGGNPKKNASSYPA 1484
>Z81120-8|CAB03348.1| 2561|Caenorhabditis elegans Hypothetical protein
T12D8.1 protein.
Length = 2561
Score = 27.1 bits (57), Expect = 9.9
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +2
Query: 263 QNGPHQLDGRTIDPKPCNPRTLQKPKRGGGYPKVFLGGLPS 385
Q P QL +DP P+T K K+GGG PK P+
Sbjct: 1448 QPPPVQLPQVDVDP----PKTAAKRKKGGGNPKKNASSYPA 1484
>Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical
protein C40H1.1 protein.
Length = 559
Score = 27.1 bits (57), Expect = 9.9
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +2
Query: 89 KLFVGGLSWETSQENLQRYFSRYGEVI 169
K+F+GGL + S+E + F +G+V+
Sbjct: 246 KVFIGGLPIDVSEEQVWATFGAFGKVL 272
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,042,108
Number of Sequences: 27780
Number of extensions: 277708
Number of successful extensions: 920
Number of sequences better than 10.0: 110
Number of HSP's better than 10.0 without gapping: 764
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 891
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1237082886
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -