Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner13k20f
         (564 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X60787-1|CAA43200.1|  543|Homo sapiens transcription factor ILF ...    34   0.30 
U58197-1|AAB02821.1|  609|Homo sapiens interleukin enhancer bind...    34   0.30 
U58196-1|AAB02820.1|  655|Homo sapiens interleukin enhancer bind...    34   0.30 
AF009227-1|AAC51756.1|  768|Homo sapiens gamma-heregulin protein.      32   1.6  
AL133230-3|CAI21688.2|  946|Homo sapiens chromosome 20 open read...    31   3.7  
AK056792-1|BAB71286.1|  593|Homo sapiens protein ( Homo sapiens ...    31   3.7  

>X60787-1|CAA43200.1|  543|Homo sapiens transcription factor ILF
           protein.
          Length = 543

 Score = 34.3 bits (75), Expect = 0.30
 Identities = 19/47 (40%), Positives = 26/47 (55%)
 Frame = -1

Query: 249 RTPPGPIGNASHLTLGRHAHDINARSIGSDTPRSLHQSGAASASPAE 109
           RTP GP+ + S      HA  ++A S G+ TP SL + G  S +P E
Sbjct: 242 RTPLGPLSSRSAPASPNHAGVLSAHSSGAQTPESLSREG--SPAPLE 286


>U58197-1|AAB02821.1|  609|Homo sapiens interleukin enhancer binding
           factor 2 protein.
          Length = 609

 Score = 34.3 bits (75), Expect = 0.30
 Identities = 19/47 (40%), Positives = 26/47 (55%)
 Frame = -1

Query: 249 RTPPGPIGNASHLTLGRHAHDINARSIGSDTPRSLHQSGAASASPAE 109
           RTP GP+ + S      HA  ++A S G+ TP SL + G  S +P E
Sbjct: 354 RTPLGPLSSRSAPASPNHAGVLSAHSSGAQTPESLSREG--SPAPLE 398


>U58196-1|AAB02820.1|  655|Homo sapiens interleukin enhancer binding
           factor 1 protein.
          Length = 655

 Score = 34.3 bits (75), Expect = 0.30
 Identities = 19/47 (40%), Positives = 26/47 (55%)
 Frame = -1

Query: 249 RTPPGPIGNASHLTLGRHAHDINARSIGSDTPRSLHQSGAASASPAE 109
           RTP GP+ + S      HA  ++A S G+ TP SL + G  S +P E
Sbjct: 354 RTPLGPLSSRSAPASPNHAGVLSAHSSGAQTPESLSREG--SPAPLE 398


>AF009227-1|AAC51756.1|  768|Homo sapiens gamma-heregulin protein.
          Length = 768

 Score = 31.9 bits (69), Expect = 1.6
 Identities = 20/50 (40%), Positives = 27/50 (54%)
 Frame = -1

Query: 249 RTPPGPIGNASHLTLGRHAHDINARSIGSDTPRSLHQSGAASASPAEHLL 100
           RTPP P+ +A H     HA  IN+ + G+ TPRS       S +P +H L
Sbjct: 177 RTPPPPLSHA-HTPNQHHAASINSLNRGNFTPRS-----NPSPAPTDHSL 220


>AL133230-3|CAI21688.2|  946|Homo sapiens chromosome 20 open reading
           frame 175 protein.
          Length = 946

 Score = 30.7 bits (66), Expect = 3.7
 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
 Frame = -1

Query: 243 PPGPIGNASHLTLGRHAHDINARSIGSDTPR----SLHQSGAASASPAEH 106
           PPG +   +HL+ G  A     R++G ++P     SL  SG AS+S   H
Sbjct: 448 PPGLLPEMAHLSGGPFAEQPGWRNLGGESPSLPQGSLFHSGTASSSQNGH 497


>AK056792-1|BAB71286.1|  593|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32230 fis, clone PLACE6004464, weakly similar to
           Human placenta (Diff48) mRNA. ).
          Length = 593

 Score = 30.7 bits (66), Expect = 3.7
 Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 4/50 (8%)
 Frame = -1

Query: 243 PPGPIGNASHLTLGRHAHDINARSIGSDTPR----SLHQSGAASASPAEH 106
           PPG +   +HL+ G  A     R++G ++P     SL  SG AS+S   H
Sbjct: 448 PPGLLPEMAHLSGGPFAEQPGWRNLGGESPSLPQGSLFHSGTASSSQNGH 497


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 54,493,959
Number of Sequences: 237096
Number of extensions: 937145
Number of successful extensions: 3855
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3521
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3855
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5703349406
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)