Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fner13k20f
         (564 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY058444-1|AAL13673.1|  813|Drosophila melanogaster GH22790p pro...    31   1.4  
AE013599-1347|AAF58619.2|  813|Drosophila melanogaster CG8991-PA...    31   1.4  
AY070571-1|AAL48042.1|  550|Drosophila melanogaster RE11317p pro...    29   3.3  
AY051462-1|AAK92886.1|  715|Drosophila melanogaster GH13229p pro...    29   3.3  
AE014134-1610|AAO41178.1|  550|Drosophila melanogaster CG32982-P...    29   3.3  
AE014134-1609|ABI31303.1|  571|Drosophila melanogaster CG32982-P...    29   3.3  
AE014134-1607|AAF52751.2|  715|Drosophila melanogaster CG32982-P...    29   3.3  
DQ655701-1|ABG45861.1|  813|Drosophila melanogaster JXC1 protein.      29   4.3  

>AY058444-1|AAL13673.1|  813|Drosophila melanogaster GH22790p
           protein.
          Length = 813

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 18/57 (31%), Positives = 24/57 (42%)
 Frame = -1

Query: 276 SAAPTPSLARTPPGPIGNASHLTLGRHAHDINARSIGSDTPRSLHQSGAASASPAEH 106
           S  P P     PP P+       LGR      + S+GS+T  SL Q      +P +H
Sbjct: 407 SPGPGPGAPPPPPPPVQRHLAGKLGRRKRRGISSSLGSETVASLLQKQQQQQAPQQH 463


>AE013599-1347|AAF58619.2|  813|Drosophila melanogaster CG8991-PA
           protein.
          Length = 813

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 18/57 (31%), Positives = 24/57 (42%)
 Frame = -1

Query: 276 SAAPTPSLARTPPGPIGNASHLTLGRHAHDINARSIGSDTPRSLHQSGAASASPAEH 106
           S  P P     PP P+       LGR      + S+GS+T  SL Q      +P +H
Sbjct: 407 SPGPGPGAPPPPPPPVQRHLAGKLGRRKRRGISSSLGSETVASLLQKQQQQQAPQQH 463


>AY070571-1|AAL48042.1|  550|Drosophila melanogaster RE11317p
           protein.
          Length = 550

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
 Frame = -1

Query: 288 LYE*SAAPTPSLARTPPG-PIGNASHLTLGRHAHDINARSIGSDTPRSLHQ 139
           LY    APT       P  P G  S++ L +   D +A   G DTP S H+
Sbjct: 319 LYRKPRAPTDMRHSVQPMLPTGGGSNIGLAKTELDCSAHDSGLDTPPSTHR 369


>AY051462-1|AAK92886.1|  715|Drosophila melanogaster GH13229p
           protein.
          Length = 715

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
 Frame = -1

Query: 288 LYE*SAAPTPSLARTPPG-PIGNASHLTLGRHAHDINARSIGSDTPRSLHQ 139
           LY    APT       P  P G  S++ L +   D +A   G DTP S H+
Sbjct: 458 LYRKPRAPTDMRHSVQPMLPTGGGSNIGLAKTELDCSAHDSGLDTPPSTHR 508


>AE014134-1610|AAO41178.1|  550|Drosophila melanogaster CG32982-PB,
           isoform B protein.
          Length = 550

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
 Frame = -1

Query: 288 LYE*SAAPTPSLARTPPG-PIGNASHLTLGRHAHDINARSIGSDTPRSLHQ 139
           LY    APT       P  P G  S++ L +   D +A   G DTP S H+
Sbjct: 319 LYRKPRAPTDMRHSVQPMLPTGGGSNIGLAKTELDCSAHDSGLDTPPSTHR 369


>AE014134-1609|ABI31303.1|  571|Drosophila melanogaster CG32982-PC,
           isoform C protein.
          Length = 571

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
 Frame = -1

Query: 288 LYE*SAAPTPSLARTPPG-PIGNASHLTLGRHAHDINARSIGSDTPRSLHQ 139
           LY    APT       P  P G  S++ L +   D +A   G DTP S H+
Sbjct: 340 LYRKPRAPTDMRHSVQPMLPTGGGSNIGLAKTELDCSAHDSGLDTPPSTHR 390


>AE014134-1607|AAF52751.2|  715|Drosophila melanogaster CG32982-PA,
           isoform A protein.
          Length = 715

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
 Frame = -1

Query: 288 LYE*SAAPTPSLARTPPG-PIGNASHLTLGRHAHDINARSIGSDTPRSLHQ 139
           LY    APT       P  P G  S++ L +   D +A   G DTP S H+
Sbjct: 458 LYRKPRAPTDMRHSVQPMLPTGGGSNIGLAKTELDCSAHDSGLDTPPSTHR 508


>DQ655701-1|ABG45861.1|  813|Drosophila melanogaster JXC1 protein.
          Length = 813

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 18/57 (31%), Positives = 23/57 (40%)
 Frame = -1

Query: 276 SAAPTPSLARTPPGPIGNASHLTLGRHAHDINARSIGSDTPRSLHQSGAASASPAEH 106
           S  P P     PP P+       LGR      + S GS+T  SL Q      +P +H
Sbjct: 407 SPGPGPGAPPPPPPPVQRYLAGKLGRRKRRGISSSSGSETVASLLQKQQQQQAPQQH 463


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,957,800
Number of Sequences: 53049
Number of extensions: 309830
Number of successful extensions: 1257
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1257
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2193288294
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)