Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner13k14f
(659 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U76542-1|AAD17454.1| 795|Homo sapiens pyrroline-5-carboxylate s... 148 2e-35
U68758-1|AAD00169.1| 793|Homo sapiens pyrroline-5-carboxylate s... 148 2e-35
BC117242-1|AAI17243.1| 795|Homo sapiens aldehyde dehydrogenase ... 148 2e-35
BC117240-1|AAI17241.1| 795|Homo sapiens aldehyde dehydrogenase ... 148 2e-35
BC106054-1|AAI06055.1| 795|Homo sapiens aldehyde dehydrogenase ... 148 2e-35
AL356632-3|CAI16765.1| 793|Homo sapiens aldehyde dehydrogenase ... 148 2e-35
AL356632-2|CAI16766.1| 795|Homo sapiens aldehyde dehydrogenase ... 148 2e-35
X94453-1|CAA64224.1| 795|Homo sapiens pyrroline 5-carboxylate s... 146 5e-35
>U76542-1|AAD17454.1| 795|Homo sapiens pyrroline-5-carboxylate
synthase long form protein.
Length = 795
Score = 148 bits (358), Expect = 2e-35
Identities = 74/131 (56%), Positives = 104/131 (79%), Gaps = 1/131 (0%)
Frame = +1
Query: 268 RTFTDRSQLKYARRLVVKLGSAVITREDGNGLALGRLASIIEQVAECHHEGRECIMVTSG 447
++F RS+LK+A+R+VVKLGSAV+TR D GLALGRLASI+EQV+ ++GRE ++VTSG
Sbjct: 59 KSFAHRSELKHAKRIVVKLGSAVVTRGDECGLALGRLASIVEQVSVLQNQGREMMLVTSG 118
Query: 448 AVAFGRQKLTQELLMSLSMRETL-SPSDHTREDAGSILDPRAAAAVGQSELMSMYDAMFS 624
AVAFG+Q+L E+L+S S+R+ L S + +E A +L+ RA AA GQS LM++Y+AMF+
Sbjct: 119 AVAFGKQRLRHEILLSQSVRQALHSGQNQLKEMAIPVLEARACAAAGQSGLMALYEAMFT 178
Query: 625 QYNVKIAQVLV 657
QY++ AQ+LV
Sbjct: 179 QYSICAAQILV 189
>U68758-1|AAD00169.1| 793|Homo sapiens pyrroline-5-carboxylate
synthase protein.
Length = 793
Score = 148 bits (358), Expect = 2e-35
Identities = 74/131 (56%), Positives = 104/131 (79%), Gaps = 1/131 (0%)
Frame = +1
Query: 268 RTFTDRSQLKYARRLVVKLGSAVITREDGNGLALGRLASIIEQVAECHHEGRECIMVTSG 447
++F RS+LK+A+R+VVKLGSAV+TR D GLALGRLASI+EQV+ ++GRE ++VTSG
Sbjct: 59 KSFAHRSELKHAKRIVVKLGSAVVTRGDECGLALGRLASIVEQVSVLQNQGREMMLVTSG 118
Query: 448 AVAFGRQKLTQELLMSLSMRETL-SPSDHTREDAGSILDPRAAAAVGQSELMSMYDAMFS 624
AVAFG+Q+L E+L+S S+R+ L S + +E A +L+ RA AA GQS LM++Y+AMF+
Sbjct: 119 AVAFGKQRLRHEILLSQSVRQALHSGQNQLKEMAIPVLEARACAAAGQSGLMALYEAMFT 178
Query: 625 QYNVKIAQVLV 657
QY++ AQ+LV
Sbjct: 179 QYSICAAQILV 189
>BC117242-1|AAI17243.1| 795|Homo sapiens aldehyde dehydrogenase 18
family, member A1 protein.
Length = 795
Score = 148 bits (358), Expect = 2e-35
Identities = 74/131 (56%), Positives = 104/131 (79%), Gaps = 1/131 (0%)
Frame = +1
Query: 268 RTFTDRSQLKYARRLVVKLGSAVITREDGNGLALGRLASIIEQVAECHHEGRECIMVTSG 447
++F RS+LK+A+R+VVKLGSAV+TR D GLALGRLASI+EQV+ ++GRE ++VTSG
Sbjct: 59 KSFAHRSELKHAKRIVVKLGSAVVTRGDECGLALGRLASIVEQVSVLQNQGREMMLVTSG 118
Query: 448 AVAFGRQKLTQELLMSLSMRETL-SPSDHTREDAGSILDPRAAAAVGQSELMSMYDAMFS 624
AVAFG+Q+L E+L+S S+R+ L S + +E A +L+ RA AA GQS LM++Y+AMF+
Sbjct: 119 AVAFGKQRLRHEILLSQSVRQALHSGQNQLKEMAIPVLEARACAAAGQSGLMALYEAMFT 178
Query: 625 QYNVKIAQVLV 657
QY++ AQ+LV
Sbjct: 179 QYSICAAQILV 189
>BC117240-1|AAI17241.1| 795|Homo sapiens aldehyde dehydrogenase 18
family, member A1 protein.
Length = 795
Score = 148 bits (358), Expect = 2e-35
Identities = 74/131 (56%), Positives = 104/131 (79%), Gaps = 1/131 (0%)
Frame = +1
Query: 268 RTFTDRSQLKYARRLVVKLGSAVITREDGNGLALGRLASIIEQVAECHHEGRECIMVTSG 447
++F RS+LK+A+R+VVKLGSAV+TR D GLALGRLASI+EQV+ ++GRE ++VTSG
Sbjct: 59 KSFAHRSELKHAKRIVVKLGSAVVTRGDECGLALGRLASIVEQVSVLQNQGREMMLVTSG 118
Query: 448 AVAFGRQKLTQELLMSLSMRETL-SPSDHTREDAGSILDPRAAAAVGQSELMSMYDAMFS 624
AVAFG+Q+L E+L+S S+R+ L S + +E A +L+ RA AA GQS LM++Y+AMF+
Sbjct: 119 AVAFGKQRLRHEILLSQSVRQALHSGQNQLKEMAIPVLEARACAAAGQSGLMALYEAMFT 178
Query: 625 QYNVKIAQVLV 657
QY++ AQ+LV
Sbjct: 179 QYSICAAQILV 189
>BC106054-1|AAI06055.1| 795|Homo sapiens aldehyde dehydrogenase 18
family, member A1 protein.
Length = 795
Score = 148 bits (358), Expect = 2e-35
Identities = 74/131 (56%), Positives = 104/131 (79%), Gaps = 1/131 (0%)
Frame = +1
Query: 268 RTFTDRSQLKYARRLVVKLGSAVITREDGNGLALGRLASIIEQVAECHHEGRECIMVTSG 447
++F RS+LK+A+R+VVKLGSAV+TR D GLALGRLASI+EQV+ ++GRE ++VTSG
Sbjct: 59 KSFAHRSELKHAKRIVVKLGSAVVTRGDECGLALGRLASIVEQVSVLQNQGREMMLVTSG 118
Query: 448 AVAFGRQKLTQELLMSLSMRETL-SPSDHTREDAGSILDPRAAAAVGQSELMSMYDAMFS 624
AVAFG+Q+L E+L+S S+R+ L S + +E A +L+ RA AA GQS LM++Y+AMF+
Sbjct: 119 AVAFGKQRLRHEILLSQSVRQALHSGQNQLKEMAIPVLEARACAAAGQSGLMALYEAMFT 178
Query: 625 QYNVKIAQVLV 657
QY++ AQ+LV
Sbjct: 179 QYSICAAQILV 189
>AL356632-3|CAI16765.1| 793|Homo sapiens aldehyde dehydrogenase 18
family, member A1 protein.
Length = 793
Score = 148 bits (358), Expect = 2e-35
Identities = 74/131 (56%), Positives = 104/131 (79%), Gaps = 1/131 (0%)
Frame = +1
Query: 268 RTFTDRSQLKYARRLVVKLGSAVITREDGNGLALGRLASIIEQVAECHHEGRECIMVTSG 447
++F RS+LK+A+R+VVKLGSAV+TR D GLALGRLASI+EQV+ ++GRE ++VTSG
Sbjct: 59 KSFAHRSELKHAKRIVVKLGSAVVTRGDECGLALGRLASIVEQVSVLQNQGREMMLVTSG 118
Query: 448 AVAFGRQKLTQELLMSLSMRETL-SPSDHTREDAGSILDPRAAAAVGQSELMSMYDAMFS 624
AVAFG+Q+L E+L+S S+R+ L S + +E A +L+ RA AA GQS LM++Y+AMF+
Sbjct: 119 AVAFGKQRLRHEILLSQSVRQALHSGQNQLKEMAIPVLEARACAAAGQSGLMALYEAMFT 178
Query: 625 QYNVKIAQVLV 657
QY++ AQ+LV
Sbjct: 179 QYSICAAQILV 189
>AL356632-2|CAI16766.1| 795|Homo sapiens aldehyde dehydrogenase 18
family, member A1 protein.
Length = 795
Score = 148 bits (358), Expect = 2e-35
Identities = 74/131 (56%), Positives = 104/131 (79%), Gaps = 1/131 (0%)
Frame = +1
Query: 268 RTFTDRSQLKYARRLVVKLGSAVITREDGNGLALGRLASIIEQVAECHHEGRECIMVTSG 447
++F RS+LK+A+R+VVKLGSAV+TR D GLALGRLASI+EQV+ ++GRE ++VTSG
Sbjct: 59 KSFAHRSELKHAKRIVVKLGSAVVTRGDECGLALGRLASIVEQVSVLQNQGREMMLVTSG 118
Query: 448 AVAFGRQKLTQELLMSLSMRETL-SPSDHTREDAGSILDPRAAAAVGQSELMSMYDAMFS 624
AVAFG+Q+L E+L+S S+R+ L S + +E A +L+ RA AA GQS LM++Y+AMF+
Sbjct: 119 AVAFGKQRLRHEILLSQSVRQALHSGQNQLKEMAIPVLEARACAAAGQSGLMALYEAMFT 178
Query: 625 QYNVKIAQVLV 657
QY++ AQ+LV
Sbjct: 179 QYSICAAQILV 189
>X94453-1|CAA64224.1| 795|Homo sapiens pyrroline 5-carboxylate
synthetase protein.
Length = 795
Score = 146 bits (355), Expect = 5e-35
Identities = 74/131 (56%), Positives = 103/131 (78%), Gaps = 1/131 (0%)
Frame = +1
Query: 268 RTFTDRSQLKYARRLVVKLGSAVITREDGNGLALGRLASIIEQVAECHHEGRECIMVTSG 447
++F RS+LK+A+R+VVKLGSAV+TR D GLALGRLASI+EQV+ ++GRE ++VTSG
Sbjct: 59 KSFAHRSELKHAKRIVVKLGSAVVTRGDECGLALGRLASIVEQVSVLQNQGREMMLVTSG 118
Query: 448 AVAFGRQKLTQELLMSLSMRETL-SPSDHTREDAGSILDPRAAAAVGQSELMSMYDAMFS 624
AVAFG+Q L E+L+S S+R+ L S + +E A +L+ RA AA GQS LM++Y+AMF+
Sbjct: 119 AVAFGKQTLRHEILLSQSVRQALHSGQNQLKEMAIPVLEARACAAAGQSGLMALYEAMFT 178
Query: 625 QYNVKIAQVLV 657
QY++ AQ+LV
Sbjct: 179 QYSICAAQILV 189
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,747,290
Number of Sequences: 237096
Number of extensions: 1478629
Number of successful extensions: 2963
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 2885
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2955
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7422585720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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