Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner13k10f
(633 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY739659-1|AAU85298.1| 288|Apis mellifera hyperpolarization-act... 24 1.1
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 24 1.1
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 24 1.1
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 23 2.5
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 23 2.5
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 23 2.5
AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precur... 23 2.5
AF388659-1|AAK71995.1| 782|Apis mellifera 1D-myo-inositol-trisp... 23 2.5
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 23 2.5
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 23 3.3
DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 22 4.3
DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 22 4.3
DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 22 4.3
DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 22 4.3
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 22 5.7
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 21 7.5
AF393494-1|AAL60419.1| 144|Apis mellifera odorant binding prote... 21 7.5
AF166496-1|AAD51944.1| 144|Apis mellifera pheromone-binding pro... 21 7.5
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 21 9.9
>AY739659-1|AAU85298.1| 288|Apis mellifera
hyperpolarization-activated ion channelvariant T
protein.
Length = 288
Score = 24.2 bits (50), Expect = 1.1
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -1
Query: 108 LNYILLYFHNLKHVFYNFTWLHSEKSIRDLTILTLV 1
L+YI L F+ + +F LH+ +++R L + L+
Sbjct: 179 LDYIFLIFNQFQDFSESFQILHAGRALRILRLAKLL 214
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 24.2 bits (50), Expect = 1.1
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -1
Query: 108 LNYILLYFHNLKHVFYNFTWLHSEKSIRDLTILTLV 1
L+YI L F+ + +F LH+ +++R L + L+
Sbjct: 179 LDYIFLIFNQFQDFSESFQILHAGRALRILRLAKLL 214
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 24.2 bits (50), Expect = 1.1
Identities = 11/36 (30%), Positives = 21/36 (58%)
Frame = -1
Query: 108 LNYILLYFHNLKHVFYNFTWLHSEKSIRDLTILTLV 1
L+YI L F+ + +F LH+ +++R L + L+
Sbjct: 179 LDYIFLIFNQFQDFSESFQILHAGRALRILRLAKLL 214
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 23.0 bits (47), Expect = 2.5
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = -3
Query: 547 HAWAVLVLQNLTPVPRFHYW 488
H W L L+N+ P ++ W
Sbjct: 129 HEWFQLSLKNIEPYNNYYIW 148
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.0 bits (47), Expect = 2.5
Identities = 9/30 (30%), Positives = 15/30 (50%)
Frame = +1
Query: 337 QSRICYVKYYDSANVNVAQHMTNTVFIDRA 426
+ + CY Y+ S + +H+T F RA
Sbjct: 384 KEKTCYYPYHPSTQEDSEEHLTPKRFHSRA 413
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 23.0 bits (47), Expect = 2.5
Identities = 9/30 (30%), Positives = 15/30 (50%)
Frame = +1
Query: 337 QSRICYVKYYDSANVNVAQHMTNTVFIDRA 426
+ + CY Y+ S + +H+T F RA
Sbjct: 384 KEKTCYYPYHPSTQEDSEEHLTPKRFHSRA 413
>AY127579-1|AAN02286.1| 405|Apis mellifera venom protease precursor
protein.
Length = 405
Score = 23.0 bits (47), Expect = 2.5
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -1
Query: 462 WYLTRLHRYHNQCAVYEYS 406
W +T HR + +C++ E+S
Sbjct: 72 WTITSYHRINLKCSLVEFS 90
>AF388659-1|AAK71995.1| 782|Apis mellifera
1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
Length = 782
Score = 23.0 bits (47), Expect = 2.5
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = -3
Query: 235 ARCWSLVSPSCSQTPFSRT 179
ARCWSL S + S S T
Sbjct: 213 ARCWSLDSTAASDEDISLT 231
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 23.0 bits (47), Expect = 2.5
Identities = 7/20 (35%), Positives = 11/20 (55%)
Frame = -3
Query: 547 HAWAVLVLQNLTPVPRFHYW 488
H W L L+N+ P ++ W
Sbjct: 129 HEWFQLSLKNIEPYNNYYIW 148
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 22.6 bits (46), Expect = 3.3
Identities = 8/26 (30%), Positives = 16/26 (61%)
Frame = -3
Query: 211 PSCSQTPFSRTYTFVRQTVNLMSQEN 134
P+ S TP+++ YT T ++++N
Sbjct: 439 PNASVTPYNKNYTKFCSTEKRLTKQN 464
>DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride
channel variant 4 protein.
Length = 489
Score = 22.2 bits (45), Expect = 4.3
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = -2
Query: 308 GYKRMSSILPK*PNSVC---IWSLVA*GAMLVTCITLVLPDTIFED 180
G R+SS+L S+ I++++ + +T +TLV + IFED
Sbjct: 12 GGGRLSSVLSLSLTSLASSLIFTILCILTLALTLVTLVRAEDIFED 57
>DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride
channel variant 3 protein.
Length = 475
Score = 22.2 bits (45), Expect = 4.3
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = -2
Query: 308 GYKRMSSILPK*PNSVC---IWSLVA*GAMLVTCITLVLPDTIFED 180
G R+SS+L S+ I++++ + +T +TLV + IFED
Sbjct: 12 GGGRLSSVLSLSLTSLASSLIFTILCILTLALTLVTLVRAEDIFED 57
>DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride
channel variant 1 protein.
Length = 509
Score = 22.2 bits (45), Expect = 4.3
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = -2
Query: 308 GYKRMSSILPK*PNSVC---IWSLVA*GAMLVTCITLVLPDTIFED 180
G R+SS+L S+ I++++ + +T +TLV + IFED
Sbjct: 12 GGGRLSSVLSLSLTSLASSLIFTILCILTLALTLVTLVRAEDIFED 57
>DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride
channel protein.
Length = 458
Score = 22.2 bits (45), Expect = 4.3
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = -2
Query: 308 GYKRMSSILPK*PNSVC---IWSLVA*GAMLVTCITLVLPDTIFED 180
G R+SS+L S+ I++++ + +T +TLV + IFED
Sbjct: 12 GGGRLSSVLSLSLTSLASSLIFTILCILTLALTLVTLVRAEDIFED 57
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 21.8 bits (44), Expect = 5.7
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = +1
Query: 385 VAQHMTNTVFIDRALIVIPVQSGEIPDEHK 474
+A H T + F + + PV+ G+I E K
Sbjct: 779 MAPHATASEFDEMSFYYSPVEDGKIYSEKK 808
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 21.4 bits (43), Expect = 7.5
Identities = 9/29 (31%), Positives = 19/29 (65%)
Frame = -1
Query: 87 FHNLKHVFYNFTWLHSEKSIRDLTILTLV 1
FH + + ++ WL+ +K++ ++ LTLV
Sbjct: 102 FHEMS-IPNHYLWLYHDKTLLYMSKLTLV 129
>AF393494-1|AAL60419.1| 144|Apis mellifera odorant binding protein
ASP1 protein.
Length = 144
Score = 21.4 bits (43), Expect = 7.5
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = +1
Query: 403 NTVFIDRALIVIPVQSGEIPDEHKALEMSSNGTLVPGLSSVE 528
+ +F++ A +P + ++ E KA MS +GT + V+
Sbjct: 19 HAIFVNAAPDWVPPEVFDLVAEDKARCMSEHGTTQAQIDDVD 60
>AF166496-1|AAD51944.1| 144|Apis mellifera pheromone-binding
protein ASP1 protein.
Length = 144
Score = 21.4 bits (43), Expect = 7.5
Identities = 11/42 (26%), Positives = 22/42 (52%)
Frame = +1
Query: 403 NTVFIDRALIVIPVQSGEIPDEHKALEMSSNGTLVPGLSSVE 528
+ +F++ A +P + ++ E KA MS +GT + V+
Sbjct: 19 HAIFVNAAPDWVPPEVFDLVAEDKARCMSEHGTTQAQIDDVD 60
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 21.0 bits (42), Expect = 9.9
Identities = 7/22 (31%), Positives = 13/22 (59%)
Frame = -1
Query: 630 WRQTSCCQISVVRLNDLVRRDS 565
++QT CC+ ++ V R+S
Sbjct: 339 FKQTICCKTRIIGRRSWVTRES 360
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,225
Number of Sequences: 438
Number of extensions: 3662
Number of successful extensions: 21
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18949215
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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