Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fner13j11f
(660 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
S78459-1|AAB34403.1| 50|Apis mellifera mast cell-degranulating... 24 1.1
DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein. 24 1.1
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 24 1.5
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 23 2.6
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 23 3.4
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 23 3.4
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 22 4.5
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 22 4.5
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 22 4.5
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 22 6.0
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 21 7.9
>S78459-1|AAB34403.1| 50|Apis mellifera mast cell-degranulating
peptide protein.
Length = 50
Score = 24.2 bits (50), Expect = 1.1
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = +1
Query: 613 ICRKICGRN 639
ICRKICG+N
Sbjct: 41 ICRKICGKN 49
>DQ071552-1|AAY82248.1| 495|Apis mellifera anarchy 1 protein.
Length = 495
Score = 24.2 bits (50), Expect = 1.1
Identities = 9/34 (26%), Positives = 17/34 (50%)
Frame = -1
Query: 558 KAKYSNVFFLPKYSEIRPEGTAPNTAPKHKSDAT 457
K ++ +++FL YS + +P T P + T
Sbjct: 364 KPEFGSIYFLGNYSLVPTTTASPTTEPSTTTSTT 397
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 23.8 bits (49), Expect = 1.5
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 7/49 (14%)
Frame = -2
Query: 497 QRQTPLPNTRVTP-------PRILGYLTTPDEF*SFHHKSNSALPSPVS 372
+R PLP R+ PR + TTPD F +K+ +LPS ++
Sbjct: 635 ERLPPLPPKRIRKMPSMPLLPRPISCHTTPDSFIEAPNKTLPSLPSTLT 683
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 23.0 bits (47), Expect = 2.6
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +1
Query: 151 EGCGTAGQSKWPPQSPRPHGDNSGYQKGYIRNH 249
E TA ++ PP P HGD++ Q + H
Sbjct: 262 ESMKTARENPGPPGVPGDHGDHAPKQTVRFKVH 294
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.6 bits (46), Expect = 3.4
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 151 EGCGTAGQSKWPPQSPRPHGDNSGYQ 228
E TA ++ PP P HGD++ Q
Sbjct: 323 ESMKTARENPGPPGVPGDHGDHAPKQ 348
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 22.6 bits (46), Expect = 3.4
Identities = 10/26 (38%), Positives = 14/26 (53%)
Frame = +1
Query: 151 EGCGTAGQSKWPPQSPRPHGDNSGYQ 228
E TA ++ PP P HGD++ Q
Sbjct: 323 ESMKTARENPGPPGVPGDHGDHAPKQ 348
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 22.2 bits (45), Expect = 4.5
Identities = 8/24 (33%), Positives = 13/24 (54%)
Frame = -3
Query: 232 PFDIRNCLHADEDFGVAILTVPLF 161
P D +NC E +G +L V ++
Sbjct: 169 PLDSQNCTVEIESYGYTVLDVVMY 192
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 22.2 bits (45), Expect = 4.5
Identities = 9/20 (45%), Positives = 10/20 (50%), Gaps = 1/20 (5%)
Frame = +1
Query: 181 WPPQSPR-PHGDNSGYQKGY 237
W P P HGD G+ GY
Sbjct: 1027 WSPPLPELRHGDIQGFNVGY 1046
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 22.2 bits (45), Expect = 4.5
Identities = 9/20 (45%), Positives = 10/20 (50%), Gaps = 1/20 (5%)
Frame = +1
Query: 181 WPPQSPR-PHGDNSGYQKGY 237
W P P HGD G+ GY
Sbjct: 1023 WSPPLPELRHGDIQGFNVGY 1042
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 21.8 bits (44), Expect = 6.0
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -2
Query: 221 PELSPCGRGLWGGHFDCPAVPHPS 150
P LS G+ LW F C A +P+
Sbjct: 299 PPLSLHGQLLWREFFYCAATKNPN 322
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 21.4 bits (43), Expect = 7.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 244 NHHAICGH 267
NHHAI GH
Sbjct: 285 NHHAILGH 292
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,872
Number of Sequences: 438
Number of extensions: 5645
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19855845
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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